CsaV3_UNG160180 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTGCAACCATGTGGAGAGCTTGACTTTGACGATAAATTCGATTTGGTTTCTGAATACATGCCGAAGGTGAGTGCAAGCTAAACCACTGATGACTTTGATTCATTTGACTCCTGCCCATCAACTTTTCTTTTGTTCTACAGTTTTCGGAAGAGTTTCTTGGCGATGTATCATTGCTGCTTGGCGATGGAGGTACTATGTTCTTATGATTTTTTTTTTAAGTACAACAATTGGGGGTTGGGATTCAAACCTCCCACCTCTAGGATGGAATGTTATGTCAATTACAACTTAGCTAAGCTTGCTTTGATATCTATTCTTATGATCTAACTGAAATGTAGATGTAGATCAATAAAATAAGGAAAGTTGTGGAATGATTTTGTTTATTGGTATTTGTTAGGGTATATATTGATGTTTAATCTTGGAGAGAGATTTTATTTGTTTGTTGCGGAGGTAGTGGCCCTACTATTGATTGGTTGCTATGGTTTAATTTGTTTCAGACTATAGGGGAAAGGAGATGGAAAACACTTTGCAGCCTTATTGTGACAATAAGCTGGATCTTGGTTCTTCCCAGAACTATTGTGGGGAAATGGCTATGGTTGGCTTGGATGCAATGCAGCGTGCAAATTCTACACTTGAAGATTTTGTAAGTGCATGGTATAGACTTTTTATTTTTGTTTTGAATCTTTGATTGAATATTAAATATTTGGGGGACTTCCATTGGCAAATACCTCTGATGGCATATGGTCGTATCGGCAGCATATATGGTTCAGACCTGTGGATGGGCTGGGCTGGGTTGGTTCAGTTCTTCCTTGCTGTCCCCTCTTTGTTCCAAA GTGCAACCATGTGGAGAGCTTGACTTTGACGATAAATTCGATTTGGTTTCTGAATACATGCCGAAGTTTTCGGAAGAGTTTCTTGGCGATGTATCATTGCTGCTTGGCGATGGAGACTATAGGGGAAAGGAGATGGAAAACACTTTGCAGCCTTATTGTGACAATAAGCTGGATCTTGGTTCTTCCCAGAACTATTGTGGGGAAATGGCTATGGTTGGCTTGGATGCAATGCAGCGTGCAAATTCTACACTTGAAGATTTTCATATATGGTTCAGACCTGTGGATGGGCTGGGCTGGGTTGGTTCAGTTCTTCCTTGCTGTCCCCTCTTTGTTCCAAA GTGCAACCATGTGGAGAGCTTGACTTTGACGATAAATTCGATTTGGTTTCTGAATACATGCCGAAGTTTTCGGAAGAGTTTCTTGGCGATGTATCATTGCTGCTTGGCGATGGAGACTATAGGGGAAAGGAGATGGAAAACACTTTGCAGCCTTATTGTGACAATAAGCTGGATCTTGGTTCTTCCCAGAACTATTGTGGGGAAATGGCTATGGTTGGCTTGGATGCAATGCAGCGTGCAAATTCTACACTTGAAGATTTTCATATATGGTTCAGACCTGTGGATGGGCTGGGCTGGGTTGGTTCAGTTCTTCCTTGCTGTCCCCTCTTTGTTCCAAA VQPCGELDFDDKFDLVSEYMPKFSEEFLGDVSLLLGDGDYRGKEMENTLQPYCDNKLDLGSSQNYCGEMAMVGLDAMQRANSTLEDFHIWFRPVDGLGWVGSVLPCCPLFVPX
BLAST of CsaV3_UNG160180 vs. NCBI nr
Match: XP_004146929.1 (PREDICTED: uncharacterized protein LOC101211687 [Cucumis sativus]) HSP 1 Score: 186.4 bits (472), Expect = 5.3e-44 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG160180 vs. NCBI nr
Match: KGN53207.1 (hypothetical protein Csa_4G026840 [Cucumis sativus]) HSP 1 Score: 186.4 bits (472), Expect = 5.3e-44 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG160180 vs. NCBI nr
Match: XP_008453814.1 (PREDICTED: uncharacterized protein LOC103494428 [Cucumis melo]) HSP 1 Score: 180.6 bits (457), Expect = 2.9e-42 Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of CsaV3_UNG160180 vs. NCBI nr
Match: XP_022984299.1 (uncharacterized protein LOC111482641 isoform X2 [Cucurbita maxima]) HSP 1 Score: 164.5 bits (415), Expect = 2.1e-37 Identity = 76/87 (87.36%), Postives = 81/87 (93.10%), Query Frame = 0
BLAST of CsaV3_UNG160180 vs. NCBI nr
Match: XP_023551894.1 (uncharacterized protein LOC111809728 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 162.9 bits (411), Expect = 6.2e-37 Identity = 76/87 (87.36%), Postives = 80/87 (91.95%), Query Frame = 0
BLAST of CsaV3_UNG160180 vs. TAIR10
Match: AT5G10320.1 (unknown protein) HSP 1 Score: 77.0 bits (188), Expect = 8.2e-15 Identity = 45/96 (46.88%), Postives = 56/96 (58.33%), Query Frame = 0
BLAST of CsaV3_UNG160180 vs. TrEMBL
Match: tr|A0A0A0KXR8|A0A0A0KXR8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026840 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 3.5e-44 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG160180 vs. TrEMBL
Match: tr|A0A1S3BX98|A0A1S3BX98_CUCME (uncharacterized protein LOC103494428 OS=Cucumis melo OX=3656 GN=LOC103494428 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.9e-42 Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of CsaV3_UNG160180 vs. TrEMBL
Match: tr|A0A2S1CET5|A0A2S1CET5_PRUYE (Uncharacterized protein OS=Prunus yedoensis OX=3759 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.3e-18 Identity = 52/87 (59.77%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of CsaV3_UNG160180 vs. TrEMBL
Match: tr|A0A2S1CET6|A0A2S1CET6_PRUYE (Uncharacterized protein OS=Prunus yedoensis OX=3759 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 9.5e-18 Identity = 52/87 (59.77%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of CsaV3_UNG160180 vs. TrEMBL
Match: tr|M5W5C9|M5W5C9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G191000 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.2e-17 Identity = 51/87 (58.62%), Postives = 56/87 (64.37%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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