CsaV3_4G010160 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTTGCTTTTGCTTTATAAATATACACAACAATTCAATCCATTTGATCAACAAAATTAAACCATTGAATCACAAACCTTATAAACTTTATCAAACTATTCTCTTCCAATGGGACGTTGGATGAAACCAGAGGTCAGCCCCCATAACTCTTTCTTTCTCTATTTCTCATACCATAGGGAGTAAAAAGAGATGTATACATCAAAGTTTATAGATAGATATAGAATTGATTTTAGTTGATAAACAAATGAGTTTTATTAGGTGATTTGGTAACTTGAAGGTTTATCCATTGTTGGCTGCCATGGGATTTGTCACAACTATGTGCATCTTTCAGCTTACTAGAAACATTCTCATCAATCCCGACGTTAGGTACTCTCTATTTTTATTCTATTATTTTACTTCTAATCATTATTAGGATTGTTTTTTATTTACAAAATTGTCAAAGAGATCAAAATTACATTTTATATATTTTTATAAAGCTTAAATAGTTCGTTTTCTATATATATATTATATATGTTTGAGAAAATTCTAAAATATTTACCATATTTATAAAGGTATCACAATAACAATATAGAGTTTGCTTGATAATCCATTTGTTTTCTGTTTTTTGGTTTTTAAAATTGATTTTTAAAAATTACGTTTTGTTTGGTAACTTATTCATATTTTTGTTTTCTAGACAAGAAACTTGTTTTTAAGATTATGAAAGAATATTGAAAATGAAAAAAAAAATACATTTTGTTTTTTTAAAAGAAAAAAACATCGTTTTACTAAACATATATGATTTTTGTTTTTAATAAACAAAAGTTTAGAAATAGAATTTAAGAAACACAAGAAACAAAAACAAAAACTTGAAATGAGAAGTTGTTTTTGTTTTTGAAATTGAACTAAAACTTCAACATTGTGTTTGAATAGAAAATAAATTTAATGTTAGAAAACAAAAAATGGAATGGGTGGGAATTCATAAAGTAAACTATGGGTATTTTGTATAAAGAACAATAAATTTGTTGTAATATAAAAAAGAAATGTAATTTTGTGTATTGCAGAGTGAAGAAATCGCATCGTAGAATGGGAGTATTGGATAACGAAGAGGAAGGAGAGAAGTATTCAGAGCATAGCCTCCGGCGGTTCCTCCGAACACGGCCACCGGAAATCATGCCAACAATTAATCACTATTTTTCCCAAGACCACAAATAAATGATTTCAATTATCACACTTTCACTTAATTACTCCCAATTTCCTTTATTACACTCTCGACTTTCTGTTTTGTTTGCCTTTGCTTTATTTATGTCCCTTTTTTTCCTTTACGTAAGTGTAAGGTGGCTTGCCCACACATTGGGGATAATAACAATTATAGTATATATGTTCTATATATGATCTCATTTCTCTTTATACCATTCAACACTATTCTTTCTTGCTCTGATTCTAACTAGTAGAATCCAGATAATAATATATCAGTAAGGCAAC ATGGGACGTTGGATGAAACCAGAGGTTTATCCATTGTTGGCTGCCATGGGATTTGTCACAACTATGTGCATCTTTCAGCTTACTAGAAACATTCTCATCAATCCCGACGTTAGAGTGAAGAAATCGCATCGTAGAATGGGAGTATTGGATAACGAAGAGGAAGGAGAGAAGTATTCAGAGCATAGCCTCCGGCGGTTCCTCCGAACACGGCCACCGGAAATCATGCCAACAATTAATCACTATTTTTCCCAAGACCACAAATAA ATGGGACGTTGGATGAAACCAGAGGTTTATCCATTGTTGGCTGCCATGGGATTTGTCACAACTATGTGCATCTTTCAGCTTACTAGAAACATTCTCATCAATCCCGACGTTAGAGTGAAGAAATCGCATCGTAGAATGGGAGTATTGGATAACGAAGAGGAAGGAGAGAAGTATTCAGAGCATAGCCTCCGGCGGTTCCTCCGAACACGGCCACCGGAAATCATGCCAACAATTAATCACTATTTTTCCCAAGACCACAAATAA MGRWMKPEVYPLLAAMGFVTTMCIFQLTRNILINPDVRVKKSHRRMGVLDNEEEGEKYSEHSLRRFLRTRPPEIMPTINHYFSQDHK
BLAST of CsaV3_4G010160 vs. NCBI nr
Match: XP_004137261.1 (PREDICTED: uncharacterized protein LOC101217963 [Cucumis sativus]) HSP 1 Score: 184.5 bits (467), Expect = 1.6e-43 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of CsaV3_4G010160 vs. NCBI nr
Match: XP_008464582.1 (PREDICTED: uncharacterized protein LOC103502424 [Cucumis melo]) HSP 1 Score: 169.9 bits (429), Expect = 4.0e-39 Identity = 79/85 (92.94%), Postives = 83/85 (97.65%), Query Frame = 0
BLAST of CsaV3_4G010160 vs. NCBI nr
Match: XP_022980760.1 (uncharacterized protein LOC111480034 [Cucurbita maxima]) HSP 1 Score: 163.7 bits (413), Expect = 2.8e-37 Identity = 75/85 (88.24%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of CsaV3_4G010160 vs. NCBI nr
Match: XP_022955974.1 (uncharacterized protein LOC111457808 [Cucurbita moschata]) HSP 1 Score: 160.6 bits (405), Expect = 2.4e-36 Identity = 73/85 (85.88%), Postives = 80/85 (94.12%), Query Frame = 0
BLAST of CsaV3_4G010160 vs. NCBI nr
Match: XP_022155075.1 (uncharacterized protein LOC111022208 [Momordica charantia]) HSP 1 Score: 159.5 bits (402), Expect = 5.4e-36 Identity = 73/85 (85.88%), Postives = 80/85 (94.12%), Query Frame = 0
BLAST of CsaV3_4G010160 vs. TAIR10
Match: AT3G29970.1 (B12D protein) HSP 1 Score: 133.3 bits (334), Expect = 7.5e-32 Identity = 53/85 (62.35%), Postives = 75/85 (88.24%), Query Frame = 0
BLAST of CsaV3_4G010160 vs. TAIR10
Match: AT3G48140.1 (B12D protein) HSP 1 Score: 99.0 bits (245), Expect = 1.6e-21 Identity = 44/81 (54.32%), Postives = 57/81 (70.37%), Query Frame = 0
BLAST of CsaV3_4G010160 vs. TrEMBL
Match: tr|A0A1S3CLU5|A0A1S3CLU5_CUCME (uncharacterized protein LOC103502424 OS=Cucumis melo OX=3656 GN=LOC103502424 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 2.6e-39 Identity = 79/85 (92.94%), Postives = 83/85 (97.65%), Query Frame = 0
BLAST of CsaV3_4G010160 vs. TrEMBL
Match: tr|A0A0L9U2X2|A0A0L9U2X2_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g013500 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 3.9e-35 Identity = 71/85 (83.53%), Postives = 78/85 (91.76%), Query Frame = 0
BLAST of CsaV3_4G010160 vs. TrEMBL
Match: tr|A0A0S3RRM9|A0A0S3RRM9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G034700 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 3.9e-35 Identity = 71/85 (83.53%), Postives = 78/85 (91.76%), Query Frame = 0
BLAST of CsaV3_4G010160 vs. TrEMBL
Match: tr|A0A1S3TUZ5|A0A1S3TUZ5_VIGRR (uncharacterized protein LOC106759119 OS=Vigna radiata var. radiata OX=3916 GN=LOC106759119 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 5.1e-35 Identity = 71/85 (83.53%), Postives = 78/85 (91.76%), Query Frame = 0
BLAST of CsaV3_4G010160 vs. TrEMBL
Match: tr|A0A067JNC6|A0A067JNC6_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_25584 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 5.1e-35 Identity = 67/85 (78.82%), Postives = 79/85 (92.94%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |