MELO3C016632.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTATCAAATAAATAATCCCAAACTCCCTCACCTCACGCCGTCGACCCCCTCCCTTCTCTGCTTGGGTTTTTCTCCGGCGGTGACCATCACAAAGACCCGCGAACCAGCGTTGCTCGGACGTTTCCGGCGTTACCCACGTAACCCAAACCACGTGGTCACTGAGTTCTCTTCGTCGTTGAACTCATCGACGGTTGTCTACTTCGGCAACGATGTCAGGCAACACGCGGGAATGCTACACTTGCAGCCGTTACCTGCGATTGGTGAATTGCACCAGCTAGAAGCTTAGAGTTCTAGTTCTGGATTGAACCAACTAGAAATTTTGGTGCTTATACTCACTCCGATTTGCCTCTAATCGGATTACCCATTACGTTGATAGTTCAGATCTAGAAGTTTCGACTCTTTCGGACAGCAACCAGAGAAGATCAAGCCTTTTTGGTTAGTTTCAGGTGGTATTGACTTGAATCCTTTCGGACTCGATTAAAGTGTCTCATAGTTTTGGACTAATTTGGAATGGCCGTTTAAGGTCTATGTTGATTTTTGGTAGAAATATCTCTCATGAACAGTCAGTTTCTATTAAGGTTGCAGACTTGATTGTAACCTCTAAACAATGTCTTTATTGTTTAGGCTTCGAATGGGAAATGCTGCTTTTCAAGAAATTAAAATTTGGATAAAATTTTGTAGGTTTTTGATTGAGTTAAGTAGTTTTCACATCCTTTCGAAATTTAAATGATAAAGTTATGGTTTGACTATAGTGATTAGACAGATGTTTGAAAGGATGCTTTGTATTGTTTGAAATGGAAGGAAATTGTTTTGTATGTTGTAATGTGTTTTGGATAATTTGAAATAAAGTTTTCTGATTGATTTTGAATTGAAAATAAGTCTGTTTTAGTTTTGTTACTCATAAAAAATTTAGTTTTGTTTTGAACAGGTATGAAAGAAATTTGATTGATTGGAATTCCTATCTCTGTATGCGACTTTTTGTTGTTGGGATTGCTTGCTTATTATGTGTAAGCCAAATTTATTGACGGTTAATTGATTGAAACTATTTGTGGGAAGATGGCTTATAGTGGTTTTACATTACTTTGAAATGAAGGTTCATGTGTTCCACTTTGAAATGAAGGTTCATGTGTGTTCCACTCATATGGTCTAACTCTTAAAATAAGTGCATGGAATGTTCTCTTAGAGTCATATTAGATTGATAGGTGTTACTGACGGCTAGCCAAATATGTCTTGACTACTCTAATTTGCATCTTTTCCACTATGTTTAATGAAAGTATTGATTGATTGAAAGTTCTGTTTGATTGATAATTTTGTTCAATAGAAAATCTTAACTGATTGATATTGAAAATCCATTCCAAAGCTTTGTTTTATTAAAAGTATTAAAGTTTTGTTTTATTGAAAGTTTTTTTGGATGTTGTAAAAGCCTATTTGGAAGTTGTAGTTTGAAACTTTTGGTTTTGAAAGCTTAATTGATTAAAAGATTTTGGATTTGAAAGCACGATTGTAACAAAGCTATAACTGAAAATAGTGCAAGAGTTTGTATGTTTAATTGTTTTGAAAGAAGAATGGATTTCAAAATTTGATATGAGAATTGATTATTGAATCTTTTTGTACTCATTTTTTTTTCTAAAACATTTTCAAATGAAGGATAAAATGATAGTTTTGAAAGAAGTGAAATTTGAAGTCTCGCACAAGACATTATAAGATTTTTGTAGGACTTGATAGTTTACCTTAACAATCATTTATAAGAATTTTTTTCCACAGAACCGTGTCAGTCGTTATAGTTTCTAATTGTTATGTTTTATGTATTATTGTTTGATAATAGTTGTATTAGAAAATATAGGCTTCTGCACGAGAATTTCTTAGATCCTGACGGCAAACATAGTTTGACTGAGCACGGTTTGCTACCATGATACGGTCGGTGATAGTGATGAATACTGAGGGCAAGCCTCGGTTTGCTAAGTTCTACGATTTTCAGGTTCCTTTCTGGGATTTGTGTTGATTTTTTTGTACTGTTTGGGCCATTTCTATCGAATGATCTGTCTGATGATGAATTCATGAATCCAGCCCATAGAGAAGCAGCAGGAGCTCATTCGCAGCGTCTATGGAGGTTGGCAATTCTACATTTAATATTTCCAATTAGAATTTTGTAAATTACTAAAATGGTCAGTGGTATTTCCACTATTGTAACTATGGTTTCTTTAACTTGTATTTCTATTTTGATATCTTTTGTTTCCTGTTTTGGTACAGTACTTTGCAGTCGAGCTGAGAACATCAGCAATTTCGTGGAGGCTGAGTCCATCTTCGGTTCGGTAATATTTCCTTGTCCAATAATTTCCTTATAGTACTTGTGTTTAGAATGTACTTGAATTGATGATTCTTTGAGAAGCTAGAAACTTGTCAAAAATGAATGTTGGTTGGTATTGTTCAATAAGTTGTAGTGCAATTATAGAGTGGGCTAGGCTAGTTGATTAGTCGAACTGGCAAATGCTAATGAGTTATAACAGATAAACTAGTTTTATGTGGCTCCTTGTATCGGAATTGCTTTAACTTCTCCTTCAAATGAACTGTGGGGATTGGTATTTTCTTTCTGCTGCAGGACTCGCGTCTTGTTTACAAACACTTTGCAACCCTTTATTTTGTGCTTGTCTTTAACAGTTCTGAGAATGAGCTTGCCATGCTTGACCTGATACAAGGTACTTCCAATATTTTATGTGATAGATTTGTGACCTCTAGATTACTTATTATGGAAATGTTACAAGGCATCTAAGAGGACTTTAGTACTCCTTGTTACCTCAAGTTTTGAACCAGATGGTATTTGTTAAGTTTAGGAATTCTTTAGTACATAATTACGATTACCAGAAGTCCAAGGAAAGGAATGATGAAACGTGTGGGATTCTCTAAACCAAATAGACCTGAATAATTGCATAATTTGAACTTCGAAGAGGATTGAACCAACTTGAAGTTGAATCATCAAAACTTCTTATTACATAATCTACGCCTTTAAAGTGGAATCAACTTGTAGTCTGTCGTATATTTGTATGCATTTGAATGTTCGATCTTCAGATGTTTGTAGTTATGAACTTTTAGTAATGTAGTGCAATGATATGATTAGTTTTGTTGTCTTGTATTATTCCCTTAATTGATTGCATGATTAGGCCCTACTTTGTCAGTTTTTGTAGAAACATTGGACAAGTGCTTCAAAAATGTATGTGAGCTTGACTTAGTGTTCAACTACAGCAAGGTCAGCTCTCTCTCTCTCTCTCATGACACATTATGTACACATGCGCCCACATACACAACACCATAGTCTCGAAACAAGTGATATCTTTTGTCTGTAACTCATGTTTGTTTCTGAAATGGCCAAGTGAACTCTGTTGATGACATTGTTTGGTTGGAAGGAACACACGATTCTCAATTCATTCTTCAAAATATTAAACTGGAATTCAATAAGAACAGAAAATTTCATGCAGATGCATTCGATTTTGGATGAAATCATTTCTGGTGGCCAAGTGCTAGAGACTAGTTCTTCTGAAGTGATGAAGGCTGTTGAAGAAATATCCAAGTGCTCTCTCTCTCCCCCTCTATCTCTAATCCAAAAACTGTTGGTTACTCTGTGCTTCAAGGGTTTAATGCACGTTCATGTTGTTGTTACGCATTGTAGGTTGGAAACAGCCTCAAATTCTATCAACTTTGTCTCAAAAACAGTTTCTGGTTGGCGGGGTTGAGTTCGTTGTTTTAACCGAGTTGGCAACACGATTCAGGGGGCATTCTTTAGATGCCTTGCCTTGAAATTTTTGCTAGACCTGTTGTTGGTTTTGACTGATTAGTGTGGATAGGCAAATCTCCAAGCTATATCCGATTCGAAGACAACATGTATTTGCATCATTAATTGACAGATTTCAGATGGCTGCTGAGTAGAGCCACTTATCTCAACTAGTTGTTGGTTCTTAATGGCCATGCTCTCAAGCATCTACTTGATATATTATTTTGAAGACTACTTTGCCTCACCTGGATTTTGATTCTATTAACAATTTGATGAAAAGCAGTTTCTCAAAATATGTTGAATGAATCAATTTGTTGAGAAAAAGATTAAGGTCTTTTCATCCTTTTAATGTTAGATTTTCAATTTTCAAGAAGTTCAATCAATATGATGTCTCTTTAATTG TCTATCAAATAAATAATCCCAAACTCCCTCACCTCACGCCGTCGACCCCCTCCCTTCTCTGCTTGGGTTTTTCTCCGGCGGTGACCATCACAAAGACCCGCGAACCAGCGTTGCTCGGACGTTTCCGGCGTTACCCACGTAACCCAAACCACGTGGTCACTGAGTTCTCTTCGTCGTTGAACTCATCGACGGTTGTCTACTTCGGCAACGATGTCAGGCAACACGCGGGAATGCTACACTTGCAGCCGTTACCTGCGATTGGTGAATTGCACCAGCTAGAAGCTTAGAGTTCTAGTTCTGGATTGAACCAACTAGAAATTTTGGTGCTTATACTCACTCCGATTTGCCTCTAATCGGATTACCCATTACGTTGATAGTTCAGATCTAGAAGTTTCGACTCTTTCGGACAGCAACCAGAGAAGATCAAGCCTTTTTGTTGTATTAGAAAATATAGGCTTCTGCACGAGAATTTCTTAGATCCTGACGGCAAACATAGTTTGACTGAGCACGGTTTGCTACCATGATACGGTCGGTGATAGTGATGAATACTGAGGGCAAGCCTCGGTTTGCTAAGTTCTACGATTTTCAGCCCATAGAGAAGCAGCAGGAGCTCATTCGCAGCGTCTATGGAGTACTTTGCAGTCGAGCTGAGAACATCAGCAATTTCGTGGAGGCTGAGTCCATCTTCGGTTCGGACTCGCGTCTTGTTTACAAACACTTTGCAACCCTTTATTTTGTGCTTGTCTTTAACAGTTCTGAGAATGAGCTTGCCATGCTTGACCTGATACAAGTTTTTGTAGAAACATTGGACAAGTGCTTCAAAAATGTATGTGAGCTTGACTTAGTGTTCAACTACAGCAAGATGCATTCGATTTTGGATGAAATCATTTCTGGTGGCCAAGTGCTAGAGACTAGTTCTTCTGAAGTGATGAAGGCTGTTGAAGAAATATCCAAGTTGGAAACAGCCTCAAATTCTATCAACTTTGTCTCAAAAACAGTTTCTGGTTGGCGGGGTTGAGTTCGTTGTTTTAACCGAGTTGGCAACACGATTCAGGGGGCATTCTTTAGATGCCTTGCCTTGAAATTTTTGCTAGACCTGTTGTTGGTTTTGACTGATTAGTGTGGATAGGCAAATCTCCAAGCTATATCCGATTCGAAGACAACATGTATTTGCATCATTAATTGACAGATTTCAGATGGCTGCTGAGTAGAGCCACTTATCTCAACTAGTTGTTGGTTCTTAATGGCCATGCTCTCAAGCATCTACTTGATATATTATTTTGAAGACTACTTTGCCTCACCTGGATTTTGATTCTATTAACAATTTGATGAAAAGCAGTTTCTCAAAATATGTTGAATGAATCAATTTGTTGAGAAAAAGATTAAGGTCTTTTCATCCTTTTAATGTTAGATTTTCAATTTTCAAGAAGTTCAATCAATATGATGTCTCTTTAATTG ATGATACGGTCGGTGATAGTGATGAATACTGAGGGCAAGCCTCGGTTTGCTAAGTTCTACGATTTTCAGCCCATAGAGAAGCAGCAGGAGCTCATTCGCAGCGTCTATGGAGTACTTTGCAGTCGAGCTGAGAACATCAGCAATTTCGTGGAGGCTGAGTCCATCTTCGGTTCGGACTCGCGTCTTGTTTACAAACACTTTGCAACCCTTTATTTTGTGCTTGTCTTTAACAGTTCTGAGAATGAGCTTGCCATGCTTGACCTGATACAAGTTTTTGTAGAAACATTGGACAAGTGCTTCAAAAATGTATGTGAGCTTGACTTAGTGTTCAACTACAGCAAGATGCATTCGATTTTGGATGAAATCATTTCTGGTGGCCAAGTGCTAGAGACTAGTTCTTCTGAAGTGATGAAGGCTGTTGAAGAAATATCCAAGTTGGAAACAGCCTCAAATTCTATCAACTTTGTCTCAAAAACAGTTTCTGGTTGGCGGGGTTGA MIRSVIVMNTEGKPRFAKFYDFQPIEKQQELIRSVYGVLCSRAENISNFVEAESIFGSDSRLVYKHFATLYFVLVFNSSENELAMLDLIQVFVETLDKCFKNVCELDLVFNYSKMHSILDEIISGGQVLETSSSEVMKAVEEISKLETASNSINFVSKTVSGWRG
BLAST of MELO3C016632.2 vs. NCBI nr
Match: XP_008452384.1 (PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452386.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452387.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452388.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452389.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452390.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452391.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_016901330.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo]) HSP 1 Score: 318.9 bits (816), Expect = 9.9e-84 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
BLAST of MELO3C016632.2 vs. NCBI nr
Match: XP_011655957.1 (PREDICTED: AP-3 complex subunit sigma [Cucumis sativus] >XP_011655958.1 PREDICTED: AP-3 complex subunit sigma [Cucumis sativus]) HSP 1 Score: 311.6 bits (797), Expect = 1.6e-81 Identity = 160/165 (96.97%), Postives = 162/165 (98.18%), Query Frame = 0
BLAST of MELO3C016632.2 vs. NCBI nr
Match: XP_022978569.1 (AP-3 complex subunit sigma-like [Cucurbita maxima]) HSP 1 Score: 305.4 bits (781), Expect = 1.1e-79 Identity = 154/165 (93.33%), Postives = 163/165 (98.79%), Query Frame = 0
BLAST of MELO3C016632.2 vs. NCBI nr
Match: XP_022950395.1 (AP-3 complex subunit sigma-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 304.3 bits (778), Expect = 2.5e-79 Identity = 154/165 (93.33%), Postives = 163/165 (98.79%), Query Frame = 0
BLAST of MELO3C016632.2 vs. NCBI nr
Match: XP_022159031.1 (AP-3 complex subunit sigma [Momordica charantia] >XP_022159032.1 AP-3 complex subunit sigma [Momordica charantia] >XP_022159033.1 AP-3 complex subunit sigma [Momordica charantia] >XP_022159034.1 AP-3 complex subunit sigma [Momordica charantia]) HSP 1 Score: 300.1 bits (767), Expect = 4.8e-78 Identity = 152/165 (92.12%), Postives = 160/165 (96.97%), Query Frame = 0
BLAST of MELO3C016632.2 vs. TAIR10
Match: AT3G50860.1 (Clathrin adaptor complex small chain family protein) HSP 1 Score: 268.5 bits (685), Expect = 2.8e-72 Identity = 131/165 (79.39%), Postives = 151/165 (91.52%), Query Frame = 0
BLAST of MELO3C016632.2 vs. TAIR10
Match: AT1G47830.1 (SNARE-like superfamily protein) HSP 1 Score: 104.8 bits (260), Expect = 5.3e-23 Identity = 55/147 (37.41%), Postives = 93/147 (63.27%), Query Frame = 0
BLAST of MELO3C016632.2 vs. TAIR10
Match: AT2G17380.1 (associated protein 19) HSP 1 Score: 102.8 bits (255), Expect = 2.0e-22 Identity = 54/162 (33.33%), Postives = 99/162 (61.11%), Query Frame = 0
BLAST of MELO3C016632.2 vs. TAIR10
Match: AT4G35410.2 (Clathrin adaptor complex small chain family protein) HSP 1 Score: 102.8 bits (255), Expect = 2.0e-22 Identity = 55/162 (33.95%), Postives = 98/162 (60.49%), Query Frame = 0
BLAST of MELO3C016632.2 vs. TAIR10
Match: AT2G19790.1 (SNARE-like superfamily protein) HSP 1 Score: 99.4 bits (246), Expect = 2.2e-21 Identity = 47/144 (32.64%), Postives = 94/144 (65.28%), Query Frame = 0
BLAST of MELO3C016632.2 vs. Swiss-Prot
Match: sp|Q8VZ37|AP3S_ARATH (AP-3 complex subunit sigma OS=Arabidopsis thaliana OX=3702 GN=At3g50860 PE=2 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 5.0e-71 Identity = 131/165 (79.39%), Postives = 151/165 (91.52%), Query Frame = 0
BLAST of MELO3C016632.2 vs. Swiss-Prot
Match: sp|Q1JQA3|AP3S2_BOVIN (AP-3 complex subunit sigma-2 OS=Bos taurus OX=9913 GN=AP3S2 PE=2 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 5.1e-39 Identity = 77/155 (49.68%), Postives = 114/155 (73.55%), Query Frame = 0
BLAST of MELO3C016632.2 vs. Swiss-Prot
Match: sp|P59780|AP3S2_HUMAN (AP-3 complex subunit sigma-2 OS=Homo sapiens OX=9606 GN=AP3S2 PE=2 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 5.1e-39 Identity = 77/155 (49.68%), Postives = 114/155 (73.55%), Query Frame = 0
BLAST of MELO3C016632.2 vs. Swiss-Prot
Match: sp|Q8BSZ2|AP3S2_MOUSE (AP-3 complex subunit sigma-2 OS=Mus musculus OX=10090 GN=Ap3s2 PE=1 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 5.1e-39 Identity = 77/155 (49.68%), Postives = 114/155 (73.55%), Query Frame = 0
BLAST of MELO3C016632.2 vs. Swiss-Prot
Match: sp|Q5RDP9|AP3S2_PONAB (AP-3 complex subunit sigma-2 OS=Pongo abelii OX=9601 GN=AP3S2 PE=2 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 5.1e-39 Identity = 77/155 (49.68%), Postives = 114/155 (73.55%), Query Frame = 0
BLAST of MELO3C016632.2 vs. TrEMBL
Match: tr|A0A1S3BT37|A0A1S3BT37_CUCME (AP complex subunit sigma OS=Cucumis melo OX=3656 GN=LOC103493438 PE=3 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 6.6e-84 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
BLAST of MELO3C016632.2 vs. TrEMBL
Match: tr|A0A2I4F470|A0A2I4F470_9ROSI (AP complex subunit sigma OS=Juglans regia OX=51240 GN=LOC108995339 PE=3 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 5.2e-73 Identity = 142/165 (86.06%), Postives = 156/165 (94.55%), Query Frame = 0
BLAST of MELO3C016632.2 vs. TrEMBL
Match: tr|V4SP93|V4SP93_9ROSI (AP complex subunit sigma OS=Citrus clementina OX=85681 GN=CICLE_v10026648mg PE=3 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 8.3e-71 Identity = 137/164 (83.54%), Postives = 155/164 (94.51%), Query Frame = 0
BLAST of MELO3C016632.2 vs. TrEMBL
Match: tr|A0A2P5FXK7|A0A2P5FXK7_9ROSA (AP complex subunit sigma OS=Trema orientalis OX=63057 GN=TorRG33x02_015160 PE=3 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 1.1e-70 Identity = 135/164 (82.32%), Postives = 154/164 (93.90%), Query Frame = 0
BLAST of MELO3C016632.2 vs. TrEMBL
Match: tr|A0A061DFS8|A0A061DFS8_THECC (AP complex subunit sigma OS=Theobroma cacao OX=3641 GN=TCM_000388 PE=3 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 2.4e-70 Identity = 135/164 (82.32%), Postives = 153/164 (93.29%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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