BLAST of Cla013988 vs. Swiss-Prot
Match:
PP354_ARATH (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana GN=ELI1 PE=3 SV=1)
HSP 1 Score: 748.8 bits (1932), Expect = 4.8e-215
Identity = 371/630 (58.89%), Postives = 480/630 (76.19%), Query Frame = 1
Query: 16 PIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQIHASLLRHG---HYH 75
P+ T+ S+++TAR R E+ A+LIDKS+SVD +LQIHA++LRH H
Sbjct: 5 PLLATSLPQNQLSTTATARF--RLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPR 64
Query: 76 NPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFDRALGYYSQML 135
P+LN KL R+YA+ G++ +S+A+F + +P++F F+A I++ L D+A Y Q+L
Sbjct: 65 YPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLL 124
Query: 136 TRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDVYARGGDVVCARQ 195
+ + PN FTFSS+LKSCS + GK++H +K G D YV TGLVDVYA+GGDVV A++
Sbjct: 125 SSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQK 184
Query: 196 LFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMIGGYAQNGLPNES 255
+FD+MPERSLVS TAM+ CYAK G ++ ARALFD M +RD+V WNVMI GYAQ+G PN++
Sbjct: 185 VFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDA 244
Query: 256 LKLFRRMLV-AKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQINVHVGTALID 315
L LF+++L K P+EIT++A LSAC Q+GALE+GRW+H ++++ I++NV V T LID
Sbjct: 245 LMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLID 304
Query: 316 MYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTE-TGYQPTDI 375
MYSKCGSLE+A LVF+ KD+VAWN+MI GY+MHG+SQ+AL+LF EM TG QPTDI
Sbjct: 305 MYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDI 364
Query: 376 TFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGHLEEAYELVKN 435
TFIG L AC+H GLV EG F M +Y I+PK+EHYGC+V+LLGRAG L+ AYE +KN
Sbjct: 365 TFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKN 424
Query: 436 MSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYAATGNWEGV 495
M++ AD VLW S+LGSC+LHG+ LG+EIAE+L+ + NSG YVLLSNIYA+ G++EGV
Sbjct: 425 MNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGV 484
Query: 496 AKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINSWLKARRYT 555
AK+R LMKE GI KEPG S+IE+ NKVHEF AG+R+H KSKEIY ML +I+ +K+ Y
Sbjct: 485 AKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYV 544
Query: 556 PQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVCLDCHAVMKLI 615
P VL DL E +K+QSL+VHSE+LAIA+GLIST+PG+ +KI KNLRVC DCH V KLI
Sbjct: 545 PNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLI 604
Query: 616 SEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
S+ITGRKIVMRDRNRFHHF +G CSCGD+W
Sbjct: 605 SKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
BLAST of Cla013988 vs. Swiss-Prot
Match:
PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1)
HSP 1 Score: 513.8 bits (1322), Expect = 2.6e-144
Identity = 279/640 (43.59%), Postives = 400/640 (62.50%), Query Frame = 1
Query: 27 PSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQIHASLLRHGHYHNPILNFKLQRSYAA 86
P+SS + S Q I+ +++ L QIHA ++ G + + ++ R A
Sbjct: 15 PASSPASHPSSLFPQ-------INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCAT 74
Query: 87 LGR----LDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFDRALG----YYSQMLTRGVEP 146
LDY+ +F+ + N FS++ II + D+AL +Y M VEP
Sbjct: 75 SDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDE-DKALIAITLFYEMMSDEFVEP 134
Query: 147 NVFTFSSVLKSCS----LEPGKVLHCQAIKLGFDSDLYVRTGLVDVYARGGDVVCARQLF 206
N FTF SVLK+C+ ++ GK +H A+K GF D +V + LV +Y G + AR LF
Sbjct: 135 NRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF 194
Query: 207 DK-MPERSLVSQT-------------AMLACYAKLGELDEARALFDGMKQRDVVCWNVMI 266
K + E+ +V T M+ Y +LG+ AR LFD M+QR VV WN MI
Sbjct: 195 YKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMI 254
Query: 267 GGYAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQ 326
GY+ NG +++++FR M PN +T+++VL A +LG+LE G W+H Y E+ GI+
Sbjct: 255 SGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIR 314
Query: 327 INVHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEM 386
I+ +G+ALIDMYSKCG +E A VF+ + ++V+ W++MI G+++HG + +A+ F +M
Sbjct: 315 IDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM 374
Query: 387 TETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGH 446
+ G +P+D+ +I LL+ACSHGGLVEEGR +F M +EP++EHYGCMV+LLGR+G
Sbjct: 375 RQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGL 434
Query: 447 LEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNI 506
L+EA E + NM I D V+W +LLG+CR+ GN+++G+ +A L+D +SG YV LSN+
Sbjct: 435 LDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNM 494
Query: 507 YAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEI 566
YA+ GNW V++MR MKE I K+PGCS I+++ +HEF+ + HPK+KEI ML EI
Sbjct: 495 YASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEI 554
Query: 567 NSWLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC 626
+ L+ Y P VL +L EE K+ L HSEK+A AFGLIST PG I+IVKNLR+C
Sbjct: 555 SDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRIC 614
Query: 627 LDCHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
DCH+ +KLIS++ RKI +RDR RFHHF++G CSC DYW
Sbjct: 615 EDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
BLAST of Cla013988 vs. Swiss-Prot
Match:
PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 495.0 bits (1273), Expect = 1.3e-138
Identity = 247/563 (43.87%), Postives = 366/563 (65.01%), Query Frame = 1
Query: 84 YAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTF 143
Y + G LD + VF T E +V S++++I+ VQ D+AL + +M + V+ + T
Sbjct: 176 YFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235
Query: 144 SSVLKSCS----LEPGKVLHCQAIKLGFDSDLYVRTGLVDVYARGGDVVCARQLFDKMPE 203
VL +C+ LE G+ + + + +L + ++D+Y + G + A++LFD M E
Sbjct: 236 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 295
Query: 204 RSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMIGGYAQNGLPNESLKLFRRM 263
+ V+ T ML YA + + AR + + M Q+D+V WN +I Y QNG PNE+L +F +
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL 355
Query: 264 LVAKAMP-NEITILAVLSACGQLGALESGRWVHSYIENKGIQINVHVGTALIDMYSKCGS 323
+ K M N+IT+++ LSAC Q+GALE GRW+HSYI+ GI++N HV +ALI MYSKCG
Sbjct: 356 QLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGD 415
Query: 324 LEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTETGYQPTDITFIGLLSA 383
LE +R VF+ + +DV W++MI G +MHG A+ +F +M E +P +TF + A
Sbjct: 416 LEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475
Query: 384 CSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGHLEEAYELVKNMSIAADPV 443
CSH GLV+E S F M Y I P+ +HY C+V++LGR+G+LE+A + ++ M I
Sbjct: 476 CSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTS 535
Query: 444 LWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYAATGNWEGVAKMRTLMK 503
+WG+LLG+C++H N+ L E L++ + N G +VLLSNIYA G WE V+++R M+
Sbjct: 536 VWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMR 595
Query: 504 EHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINSWLKARRYTPQIGVVLH 563
G++KEPGCSSIE++ +HEFL+G+ HP S+++Y L+E+ LK+ Y P+I VL
Sbjct: 596 VTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQ 655
Query: 564 DLGEEQ-KKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVCLDCHAVMKLISEITGRK 623
+ EE+ K+QSL +HSEKLAI +GLIST+ I+++KNLRVC DCH+V KLIS++ R+
Sbjct: 656 IIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDRE 715
Query: 624 IVMRDRNRFHHFENGLCSCGDYW 641
I++RDR RFHHF NG CSC D+W
Sbjct: 716 IIVRDRYRFHHFRNGQCSCNDFW 738
HSP 2 Score: 171.0 bits (432), Expect = 4.2e-41
Identity = 112/385 (29.09%), Postives = 190/385 (49.35%), Query Frame = 1
Query: 17 IFTTNRSSVLPSSSSTARTSDRSQQVER--FALLIDKSKSVDRLLQIHASLLRHGHYHNP 76
IF+T + LP + + + + ER LI++ S+ +L Q H ++R G + +P
Sbjct: 3 IFSTAQPLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDP 62
Query: 77 ILNFKL--QRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFDRALGYYSQML 136
KL + ++ L+Y+ VFD +PN F+++ +I ++ ++ + M+
Sbjct: 63 YSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMV 122
Query: 137 TRG-VEPNVFTFSSVLKSC----SLEPGKVLHCQAIKLGFDSDLYVRTGLVDVYARGGDV 196
+ PN +TF ++K+ SL G+ LH A+K SD++V L+
Sbjct: 123 SESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIH-------- 182
Query: 197 VCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMIGGYAQNG 256
CY G+LD A +F +K++DVV WN MI G+ Q G
Sbjct: 183 -----------------------CYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 242
Query: 257 LPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQINVHVGT 316
P+++L+LF++M + +T++ VLSAC ++ LE GR V SYIE + +N+ +
Sbjct: 243 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 302
Query: 317 ALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTETGYQP 376
A++DMY+KCGS+EDA+ +FD + +KD V W +M+ GY++ + A ++ M Q
Sbjct: 303 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP----QK 352
Query: 377 TDITFIGLLSACSHGGLVEEGRSFF 393
+ + L+SA G E F
Sbjct: 363 DIVAWNALISAYEQNGKPNEALIVF 352
HSP 3 Score: 156.4 bits (394), Expect = 1.1e-36
Identity = 132/533 (24.77%), Postives = 235/533 (44.09%), Query Frame = 1
Query: 17 IFTTNRSSVLPSSSSTARTSDRSQQVER--FALLIDKSKSVDRLLQIHASLLRHGHYHNP 76
IF+T + LP + + + + ER LI++ S+ +L Q H ++R G + +P
Sbjct: 3 IFSTAQPLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDP 62
Query: 77 ILNFKL--QRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFDRALGYYSQML 136
KL + ++ L+Y+ VFD +PN F+++ +I ++ ++ + M+
Sbjct: 63 YSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMV 122
Query: 137 TRG-VEPNVFTFSSVLKSC----SLEPGKVLHCQAIKLGFDSDLYVRTGLVDVYARGGDV 196
+ PN +TF ++K+ SL G+ LH A+K SD++V L+
Sbjct: 123 SESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIH-------- 182
Query: 197 VCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMIGGYAQNG 256
CY G+LD A +F +K++DVV WN MI G+ Q G
Sbjct: 183 -----------------------CYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 242
Query: 257 LPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESG-----------RWVHSYIEN 316
P+++L+LF++M + +T++ VLSAC ++ LE G V+ + N
Sbjct: 243 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 302
Query: 317 KGIQINVHVG--------------------TALIDMYSKCGSLEDARLVFDGIRDKDVVA 376
+ + G T ++D Y+ E AR V + + KD+VA
Sbjct: 303 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 362
Query: 377 WNSMIVGYSMHGFSQNALKLFEEM-TETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLM 436
WN++I Y +G AL +F E+ + + IT + LSAC+ G +E GR +
Sbjct: 363 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 422
Query: 437 RDKYLIEPKVEHYGCMVNLLGRAGHLEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKL 496
+ K+ I ++++ + G LE++ E+ ++ D +W +++G +HG
Sbjct: 423 K-KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG---C 482
Query: 497 GEEIAEFLVDQKLAN-SGTYVLLSNIYAATGNWEGVAKMRTLMKEHGIEKEPG 508
G E + + AN V +N++ A + V + +L H +E G
Sbjct: 483 GNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF--HQMESNYG 497
BLAST of Cla013988 vs. Swiss-Prot
Match:
PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 489.2 bits (1258), Expect = 6.9e-137
Identity = 253/600 (42.17%), Postives = 364/600 (60.67%), Query Frame = 1
Query: 49 IDKSKSVDRLLQIHASLLRHGHYHNPILNFKLQR---SYAALGRLDYSVAVFDTSDEPNV 108
+ + + L QIHA +L+ G + K S + L Y+ VFD D P+
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 109 FSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCS----LEPGKVLHCQ 168
F ++ +I +R+L Y +ML N +TF S+LK+CS E +H Q
Sbjct: 81 FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140
Query: 169 AIKLGFDSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEA 228
KLG+++D+Y L++ YA G+ A LFD++PE VS +++ Y K G++D A
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIA 200
Query: 229 RALFDGMKQRDVVCWNVMIGGYAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQL 288
LF M +++ + W MI GY Q + E+L+LF M + P+ +++ LSAC QL
Sbjct: 201 LTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQL 260
Query: 289 GALESGRWVHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMI 348
GALE G+W+HSY+ I+++ +G LIDMY+KCG +E+A VF I+ K V AW ++I
Sbjct: 261 GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALI 320
Query: 349 VGYSMHGFSQNALKLFEEMTETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLI 408
GY+ HG + A+ F EM + G +P ITF +L+ACS+ GLVEEG+ F M Y +
Sbjct: 321 SGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNL 380
Query: 409 EPKVEHYGCMVNLLGRAGHLEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAE 468
+P +EHYGC+V+LLGRAG L+EA ++ M + + V+WG+LL +CR+H NI+LGEEI E
Sbjct: 381 KPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGE 440
Query: 469 FLVDQKLANSGTYVLLSNIYAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFL 528
L+ + G YV +NI+A W+ A+ R LMKE G+ K PGCS+I + HEFL
Sbjct: 441 ILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFL 500
Query: 529 AGERKHPKSKEIYVMLNEINSWLKARRYTPQIGVVLHDLGEEQKKQSL-EVHSEKLAIAF 588
AG+R HP+ ++I + L+ Y P++ +L DL ++ +++++ HSEKLAI +
Sbjct: 501 AGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITY 560
Query: 589 GLISTQPGTTIKIVKNLRVCLDCHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
GLI T+PGT I+I+KNLRVC DCH V KLIS+I R IVMRDR RFHHF +G CSCGDYW
Sbjct: 561 GLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
BLAST of Cla013988 vs. Swiss-Prot
Match:
PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 488.4 bits (1256), Expect = 1.2e-136
Identity = 252/596 (42.28%), Postives = 365/596 (61.24%), Query Frame = 1
Query: 51 KSKSVDRLLQIHASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSA 110
KSK+ QIH +L+ G + ++ L Y GRL+ + VFD S +V S++A
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 111 IIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSD 170
+I + + A + ++ + V S ++ + + L +K D
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 171 LYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSQ----TAMLACYAKLGELDEARALFD 230
+V A+ G + RQ+ + + S A++ Y+K GEL+ A LF+
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 231 GMKQRDVVCWNVMIGGYAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALES 290
+ +DV+ WN +IGGY L E+L LF+ ML + PN++T+L++L AC LGA++
Sbjct: 326 RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI 385
Query: 291 GRWVHSYIEN--KGIQINVHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGY 350
GRW+H YI+ KG+ + T+LIDMY+KCG +E A VF+ I K + +WN+MI G+
Sbjct: 386 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 445
Query: 351 SMHGFSQNALKLFEEMTETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPK 410
+MHG + + LF M + G QP DITF+GLLSACSH G+++ GR FR M Y + PK
Sbjct: 446 AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPK 505
Query: 411 VEHYGCMVNLLGRAGHLEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLV 470
+EHYGCM++LLG +G +EA E++ M + D V+W SLL +C++HGN++LGE AE L+
Sbjct: 506 LEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLI 565
Query: 471 DQKLANSGTYVLLSNIYAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGE 530
+ N G+YVLLSNIYA+ G W VAK R L+ + G++K PGCSSIE+++ VHEF+ G+
Sbjct: 566 KIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 625
Query: 531 RKHPKSKEIYVMLNEINSWLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLIS 590
+ HP+++EIY ML E+ L+ + P VL ++ EE K+ +L HSEKLAIAFGLIS
Sbjct: 626 KFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIS 685
Query: 591 TQPGTTIKIVKNLRVCLDCHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
T+PGT + IVKNLRVC +CH KLIS+I R+I+ RDR RFHHF +G+CSC DYW
Sbjct: 686 TKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
HSP 2 Score: 256.9 bits (655), Expect = 5.8e-67
Identity = 155/438 (35.39%), Postives = 244/438 (55.71%), Query Frame = 1
Query: 26 LPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQIHASLLRHGHYHNPILNFKLQR--S 85
LPSSS S R+ L+ K++ L IHA +++ G HN N+ L +
Sbjct: 20 LPSSSDPPYDSIRNHPS---LSLLHNCKTLQSLRIIHAQMIKIG-LHNT--NYALSKLIE 79
Query: 86 YAALGR----LDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPN 145
+ L L Y+++VF T EPN+ ++ + H AL Y M++ G+ PN
Sbjct: 80 FCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 139
Query: 146 VFTFSSVLKSCS----LEPGKVLHCQAIKLGFDSDLYVRTGLVDVYARGGDVVCARQLFD 205
+TF VLKSC+ + G+ +H +KLG D DLYV T L+ +Y + G + A ++FD
Sbjct: 140 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 199
Query: 206 KMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMIGGYAQNGLPNESLKL 265
K P R +VS TA++ YA G ++ A+ LFD + +DVV WN MI GYA+ G E+L+L
Sbjct: 200 KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 259
Query: 266 FRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQINVHVGTALIDMYSK 325
F+ M+ P+E T++ V+SAC Q G++E GR VH +I++ G N+ + ALID+YSK
Sbjct: 260 FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 319
Query: 326 CGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTETGYQPTDITFIGL 385
CG LE A +F+ + KDV++WN++I GY+ + AL LF+EM +G P D+T + +
Sbjct: 320 CGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 379
Query: 386 LSACSHGGLVEEGRSFFRLMRDKYL--IEPKVEHYGCMVNLLGRAGHLEEAYELVKNMSI 445
L AC+H G ++ GR + + DK L + ++++ + G +E A++ V N +
Sbjct: 380 LPACAHLGAIDIGR-WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ-VFNSIL 439
Query: 446 AADPVLWGSLLGSCRLHG 452
W +++ +HG
Sbjct: 440 HKSLSSWNAMIFGFAMHG 449
BLAST of Cla013988 vs. TrEMBL
Match:
W9SWM1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001076 PE=4 SV=1)
HSP 1 Score: 973.8 bits (2516), Expect = 1.0e-280
Identity = 477/640 (74.53%), Postives = 545/640 (85.16%), Query Frame = 1
Query: 1 MSSSSFFTASLPSPPPIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQ 60
M S++ FT+ P PPP +T S PS V+RFA L+D S+S+ RLLQ
Sbjct: 1 MISTTSFTSLSPPPPP--STTASHPPPS-------------VDRFAFLLDNSRSITRLLQ 60
Query: 61 IHASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRL 120
HASLLRHG + +PILNFKLQRSYAALGRLDYSVA+F + PNVF ++++IH+H Q L
Sbjct: 61 THASLLRHGFHDHPILNFKLQRSYAALGRLDYSVALFRRTPRPNVFFWTSLIHAHAQSGL 120
Query: 121 FDRALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDV 180
D+AL YY++MLT+GV+PN FTFS+VLK CSLEPG+ LHCQAIKLGFDSDLYVRTGLVDV
Sbjct: 121 HDQALLYYAEMLTQGVDPNCFTFSTVLKVCSLEPGRALHCQAIKLGFDSDLYVRTGLVDV 180
Query: 181 YARGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMI 240
YAR DV A+ LFD MPERSLVS TAM+ CYAK G++DEARALFD M RDVVCWNVMI
Sbjct: 181 YARARDVWSAQHLFDTMPERSLVSLTAMITCYAKHGKVDEARALFDRMGDRDVVCWNVMI 240
Query: 241 GGYAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQ 300
GYAQ+G+PNESL LFR+ML AK PNE+T+LAVLSACGQ+GALESGRW+H+Y+ N IQ
Sbjct: 241 DGYAQHGMPNESLFLFRKMLAAKVRPNEVTVLAVLSACGQIGALESGRWLHTYMANNRIQ 300
Query: 301 INVHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEM 360
INVHVGTALIDMYSKCGSLEDARLVFD IRDKDV+AWN+MIVGY+MHGFSQ+AL+LF EM
Sbjct: 301 INVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVIAWNTMIVGYAMHGFSQDALQLFNEM 360
Query: 361 TETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGH 420
GYQPTDITFIG+LSAC+H GLV +G+ FF LM+D+Y I+ KVEHYGCMVNLL RAGH
Sbjct: 361 CRIGYQPTDITFIGVLSACAHAGLVSQGQEFFGLMKDEYGIKLKVEHYGCMVNLLSRAGH 420
Query: 421 LEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNI 480
LEEAYEL+KNM I DPVLWG+LLG+CRLHGN LGEEIAEFLV Q LANSGTY+LLSNI
Sbjct: 421 LEEAYELIKNMDINPDPVLWGTLLGACRLHGNAALGEEIAEFLVSQDLANSGTYILLSNI 480
Query: 481 YAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEI 540
YAA+GNW+GVAK+RTLMKE GI+KEPGCSSIEVNNK+HEFLAG+++HPKSK+IY ML EI
Sbjct: 481 YAASGNWDGVAKVRTLMKESGIQKEPGCSSIEVNNKIHEFLAGDKRHPKSKQIYKMLEEI 540
Query: 541 NSWLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC 600
N WLKA YTPQ +VLHDLGE QK+QSLEVHSEKLAIAFGLIST+PGTTI++VKNLRVC
Sbjct: 541 NDWLKANGYTPQTDIVLHDLGERQKEQSLEVHSEKLAIAFGLISTKPGTTIRVVKNLRVC 600
Query: 601 LDCHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
DCHAV KLIS+ITGRKIVMRDRNRFHHFENG CSCGDYW
Sbjct: 601 PDCHAVTKLISKITGRKIVMRDRNRFHHFENGSCSCGDYW 625
BLAST of Cla013988 vs. TrEMBL
Match:
F6HSW6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g00680 PE=4 SV=1)
HSP 1 Score: 947.2 bits (2447), Expect = 1.0e-272
Identity = 464/640 (72.50%), Postives = 528/640 (82.50%), Query Frame = 1
Query: 1 MSSSSFFTASLPSPPPIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQ 60
MSS++ FT PSP S T T+ R A+LIDKSK++ LLQ
Sbjct: 1 MSSTTLFTIP-PSPAT-----------GSPPTTSTTHHFISTNRLAVLIDKSKTISHLLQ 60
Query: 61 IHASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRL 120
IHA L RHG H+PILNFKLQRSYA+LGRLDYSVA+F + P+VF ++AIIH H L
Sbjct: 61 IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGL 120
Query: 121 FDRALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDV 180
++AL +Y+QMLT+GVEPN FTFSS+LK C +EPGK LH QA+KLGFDSDLYVRTGL+DV
Sbjct: 121 HEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDV 180
Query: 181 YARGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMI 240
YARGGDVV A+QLFD MPE+SLVS TAML CYAK GELD AR LFDGM++RD VCWNVMI
Sbjct: 181 YARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMI 240
Query: 241 GGYAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQ 300
GY QNG+PNE+L LFRRML AKA PNE+T+L+VLSACGQLGALESGRWVHSYIEN GIQ
Sbjct: 241 DGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQ 300
Query: 301 INVHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEM 360
NVHVGTAL+DMYSKCGSLEDARLVFD I DKDVVAWNSMIVGY+MHGFSQ AL+LF+ M
Sbjct: 301 FNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSM 360
Query: 361 TETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGH 420
G PT+ITFIG+LSAC H G V EG F M+D+Y IEPK+EHYGCMVNLLGRAGH
Sbjct: 361 CRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGH 420
Query: 421 LEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNI 480
+E+AYELVKNM+I DPVLWG+LLG+CRLHG I LGE+I E LVDQ LANSGTY+LLSNI
Sbjct: 421 VEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNI 480
Query: 481 YAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEI 540
YAA GNW+GVA++RT+MK+ G++KEPGCSSIEVNNKVHEFLAG HPK KEIY+ML EI
Sbjct: 481 YAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEI 540
Query: 541 NSWLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC 600
N WLK+ YTPQ +VLHD+GE +K++SLEVHSEKLAIAFGLI+TQPGTTIKIVKNLRVC
Sbjct: 541 NGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVC 600
Query: 601 LDCHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
DCH V KLIS+ITGRKIV+RDRNRFHHF NG CSCGDYW
Sbjct: 601 ADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628
BLAST of Cla013988 vs. TrEMBL
Match:
U5G4L9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s10370g PE=4 SV=1)
HSP 1 Score: 921.4 bits (2380), Expect = 6.1e-265
Identity = 455/641 (70.98%), Postives = 528/641 (82.37%), Query Frame = 1
Query: 1 MSSSSFFTASLPSPP-PIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLL 60
MSS+ F+ P PP P T RSS T+ + E+ A+LIDKSKS++ L
Sbjct: 1 MSSTPIFSTPPPPPPLPHANTTRSS----------TTLHNPPPEKIAILIDKSKSLNHLN 60
Query: 61 QIHASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCR 120
Q+HA L RH + +PILNFKLQRSY++LG L+ S+A+F+ + PNVF +++IIH+H
Sbjct: 61 QVHAFLYRHNLHDHPILNFKLQRSYSSLGHLNRSLALFNKTQNPNVFFYTSIIHAHTIHN 120
Query: 121 LFDRALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVD 180
L AL +Y QML++ V PN FTFSS+LKSC +EP K+LH QAIK GFD++LYVRT LVD
Sbjct: 121 LHHLALLFYVQMLSQNVFPNAFTFSSILKSCPIEPAKLLHGQAIKFGFDAELYVRTCLVD 180
Query: 181 VYARGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVM 240
VYARGGDVV AR LFD MPE+SLVS TAM+ CYAK G +DEAR LFDG+++RD +CWNVM
Sbjct: 181 VYARGGDVVSARTLFDAMPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVM 240
Query: 241 IGGYAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGI 300
I GYAQ+GLPNE L LFR+ML AK PNE+T+LAVLSACGQ GALE+GRWVHSYIEN GI
Sbjct: 241 IDGYAQHGLPNEGLLLFRQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGI 300
Query: 301 QINVHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEE 360
INV VGT+LIDMYSKCGSLEDARLVF+ I +KDVVAWNSM+VGY+MHGFSQ+AL+LF+E
Sbjct: 301 GINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKE 360
Query: 361 MTETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAG 420
M GYQPTDITFIG+L+ACSH GLV EG FF M+D+Y IEPKVEHYGCMVNLLG AG
Sbjct: 361 MCMIGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGHAG 420
Query: 421 HLEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSN 480
+LEEAYELVKNM I DPVLWG+LLG+CRLHGNI LGE+IAE+LV Q LANSGTYVLLSN
Sbjct: 421 YLEEAYELVKNMEIDQDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSN 480
Query: 481 IYAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNE 540
IYAA GNWEGVA++RTLMKE G EKEPGCSSIEVNNKVHEFLAG+ +HPKS+EIY ML E
Sbjct: 481 IYAAAGNWEGVARVRTLMKESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEE 540
Query: 541 INSWLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRV 600
IN WLK YTPQ +VLHDL + QK++SL VHSEKLA+AFGLI+T+PGTTIKIVKNLRV
Sbjct: 541 INGWLKTHGYTPQTDIVLHDLEDAQKERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRV 600
Query: 601 CLDCHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
C DCHAV KLIS+ITGRK+VMRDRNRFHHF NGLCSCGDYW
Sbjct: 601 CADCHAVTKLISKITGRKVVMRDRNRFHHFVNGLCSCGDYW 631
BLAST of Cla013988 vs. TrEMBL
Match:
A0A0D2SWX6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G079500 PE=4 SV=1)
HSP 1 Score: 912.5 bits (2357), Expect = 2.8e-262
Identity = 447/640 (69.84%), Postives = 530/640 (82.81%), Query Frame = 1
Query: 1 MSSSSFFTASLPSPPPIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQ 60
MSS+ FT+ PPP + NRS++ S A ++ ++ LL+DKS S+ LLQ
Sbjct: 1 MSSALLFTSP---PPPTPSINRSTL-----SFAAVTNFPPSPDKLGLLLDKSSSIRHLLQ 60
Query: 61 IHASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRL 120
IHA+LLRHG + +PILNFKLQRSY++ GRLDYS+A+F+ + PN+F +++II++H L
Sbjct: 61 IHAALLRHGLHQHPILNFKLQRSYSSRGRLDYSLALFNRTLNPNIFFYTSIINAHALHGL 120
Query: 121 FDRALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDV 180
AL Y+QML GV+PN FTFSS+LKSCSLE GK+LH Q IKLGFDSDLYV+TGLVDV
Sbjct: 121 SQEALFIYTQMLFEGVQPNEFTFSSILKSCSLEHGKMLHSQVIKLGFDSDLYVKTGLVDV 180
Query: 181 YARGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMI 240
YARGGDV AR +F++MPE+SLVS T ML CYAK GEL EAR LFDGM ++DVVCWNVMI
Sbjct: 181 YARGGDVGSARLVFERMPEKSLVSLTTMLTCYAKHGELKEARLLFDGMVKKDVVCWNVMI 240
Query: 241 GGYAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQ 300
GY Q+G+P E+L LFRRML AKA PNEITIL VLSACGQLGALESGRW+HSY++N IQ
Sbjct: 241 DGYTQHGMPKEALVLFRRMLAAKARPNEITILTVLSACGQLGALESGRWLHSYMQNNDIQ 300
Query: 301 INVHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEM 360
++V V TALIDMYSKCGSLEDARLVFD I KDVVAWNSMI+GY++HGFSQ+AL+LF EM
Sbjct: 301 VSVRVATALIDMYSKCGSLEDARLVFDRIYYKDVVAWNSMIIGYALHGFSQDALELFHEM 360
Query: 361 TETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGH 420
G +PTDITFIG+L AC H GLV+EG SFF MR++Y IEPK+EHYGCMVNLLGRAG
Sbjct: 361 CRIGLRPTDITFIGVLGACGHAGLVKEGWSFFNAMREEYEIEPKIEHYGCMVNLLGRAGQ 420
Query: 421 LEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNI 480
LEEAYELVKNM + DP+LWG+LLG+CRLHGN++LGE+IAE+LV LANSGTY+LLSN+
Sbjct: 421 LEEAYELVKNMKVEPDPILWGALLGACRLHGNLELGEKIAEYLVSHNLANSGTYILLSNM 480
Query: 481 YAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEI 540
YAA G+WE VA++RTLMK+ G++KEPGCSSIEV+N+VHEFLAG KHPK+KEIY ML +
Sbjct: 481 YAAKGDWEEVARIRTLMKDSGVQKEPGCSSIEVHNRVHEFLAGNLKHPKTKEIYEMLEAM 540
Query: 541 NSWLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC 600
N WLKA YTPQ +VLHD+G+EQK+QSLEVHSEKLA+A+GLISTQPGT IKIVKNLRVC
Sbjct: 541 NGWLKAHGYTPQTEIVLHDIGDEQKEQSLEVHSEKLALAYGLISTQPGTPIKIVKNLRVC 600
Query: 601 LDCHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
DCHAV KLIS+ITGRKIVMRDRNRFHHF NG CSCGDYW
Sbjct: 601 SDCHAVTKLISKITGRKIVMRDRNRFHHFVNGSCSCGDYW 632
BLAST of Cla013988 vs. TrEMBL
Match:
A0A061DGV0_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao GN=TCM_000719 PE=4 SV=1)
HSP 1 Score: 912.1 bits (2356), Expect = 3.7e-262
Identity = 451/640 (70.47%), Postives = 523/640 (81.72%), Query Frame = 1
Query: 1 MSSSSFFTASLPSPPPIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQ 60
MSS+ FT PPI SS L SST TS ++ ALL+DKS S+ LLQ
Sbjct: 1 MSSTLLFTTPQLPQPPI----NSSTL---SSTTTTSSFPPSPDKLALLLDKSNSIHHLLQ 60
Query: 61 IHASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRL 120
IHA+LLR G + +PILNFKLQRSY++LGRLDYS+A+F+ + PN+F +++II++H L
Sbjct: 61 IHATLLRRGLHDHPILNFKLQRSYSSLGRLDYSLALFNRTLNPNIFFYTSIINAHALHGL 120
Query: 121 FDRALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDV 180
AL Y++ML GV+PN FTFSS+LKSCS E GK+LH QAIK GFDSDLYV+TGLVDV
Sbjct: 121 SQEALFIYTRMLFEGVQPNEFTFSSILKSCSFEHGKMLHSQAIKFGFDSDLYVKTGLVDV 180
Query: 181 YARGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMI 240
YARGGD+ AR +F++M E+SLVS T ML CYAK GEL+EAR LFDGM ++DVVCWNVMI
Sbjct: 181 YARGGDIGSARLVFERMLEKSLVSFTTMLTCYAKHGELEEARLLFDGMVKKDVVCWNVMI 240
Query: 241 GGYAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQ 300
GYAQ+G+PNE+L LFRRML AKA PNEITILAVLSAC QLGALESGRW+H+YI+N IQ
Sbjct: 241 DGYAQHGMPNEALVLFRRMLAAKARPNEITILAVLSACAQLGALESGRWLHTYIDNNNIQ 300
Query: 301 INVHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEM 360
+NV V TALIDMYSKCGSLEDARLVFD I DKDVVAWNSMI+GY++HGFSQ AL+LF M
Sbjct: 301 VNVRVATALIDMYSKCGSLEDARLVFDRIPDKDVVAWNSMIIGYALHGFSQEALELFHGM 360
Query: 361 TETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGH 420
T +PTDITFIG+L AC H GLV EG S F M+D+Y IEPK+EHYGCMVNLLGRAG
Sbjct: 361 CRTRLRPTDITFIGVLGACGHAGLVNEGWSLFYAMKDEYGIEPKIEHYGCMVNLLGRAGR 420
Query: 421 LEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNI 480
LEEAYEL KNM I DP+LWG+LLG+CRLHGNI LGE+I EFLV +ANSGTY+LLSN+
Sbjct: 421 LEEAYELAKNMKIEPDPILWGALLGACRLHGNIDLGEKIVEFLVGHNVANSGTYILLSNM 480
Query: 481 YAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEI 540
YAA GNWEGVA++RTLMK+ G++KEPGCSSIEVN+KVHEFLAG+ KHPKSKEIY ML E+
Sbjct: 481 YAAKGNWEGVARIRTLMKDSGVQKEPGCSSIEVNSKVHEFLAGDLKHPKSKEIYTMLEEM 540
Query: 541 NSWLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC 600
N WLKA YTPQ +VLHD+G+ QK+QSLEVHSEKLA+A+GLI TQPGT IKIVKNLRVC
Sbjct: 541 NGWLKAHGYTPQTDIVLHDIGDVQKEQSLEVHSEKLALAYGLICTQPGTPIKIVKNLRVC 600
Query: 601 LDCHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
DCHA KLIS+ITGRKIVMRDRNRFHHF NG CSCGDYW
Sbjct: 601 SDCHAATKLISKITGRKIVMRDRNRFHHFVNGSCSCGDYW 633
BLAST of Cla013988 vs. NCBI nr
Match:
gi|659079579|ref|XP_008440332.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g37380, chloroplastic [Cucumis melo])
HSP 1 Score: 1155.6 bits (2988), Expect = 0.0e+00
Identity = 574/640 (89.69%), Postives = 603/640 (94.22%), Query Frame = 1
Query: 1 MSSSSFFTASLPSPPPIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQ 60
MSSSSFFTAS PSPP IFTTNRSSV PSSSSTA+TS R QQVERFALLIDKSKSV LLQ
Sbjct: 6 MSSSSFFTASPPSPPSIFTTNRSSVSPSSSSTAKTSGRFQQVERFALLIDKSKSVAHLLQ 65
Query: 61 IHASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRL 120
IHASLLRHG YHNPILNFKLQRSYAALGRLD SV VF+T DEPNVFSFSAIIHSHVQ RL
Sbjct: 66 IHASLLRHGLYHNPILNFKLQRSYAALGRLDCSVVVFNTFDEPNVFSFSAIIHSHVQSRL 125
Query: 121 FDRALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDV 180
FDRA GYYSQML+RGVEPN FTFSSVLKSCSLE GKVLHCQAIKLG SDLYVRTGLVDV
Sbjct: 126 FDRAFGYYSQMLSRGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDV 185
Query: 181 YARGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMI 240
YARGGDVVCARQLFDKMPERSLVS T ML CY+K+GELDEAR+LF+GMK+RDVVCWNVMI
Sbjct: 186 YARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDEARSLFEGMKERDVVCWNVMI 245
Query: 241 GGYAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQ 300
GGYAQNG+PNESLKLFRRMLV+KA+PNE+T+LAVLSACGQLGALESGRWVHSYIENK IQ
Sbjct: 246 GGYAQNGVPNESLKLFRRMLVSKAIPNEVTVLAVLSACGQLGALESGRWVHSYIENKSIQ 305
Query: 301 INVHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEM 360
INVHVGTAL+DMYSKCGSLEDARLVFD IRDKDVVAWNSMIVGY+MHGFSQ+AL+LF EM
Sbjct: 306 INVHVGTALVDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFGEM 365
Query: 361 TETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGH 420
TETG+QPTDITFIG+LSAC+HGGLVEEGRS FRLMRDKY IEPK+EHYGCMVNLLGRAGH
Sbjct: 366 TETGHQPTDITFIGILSACAHGGLVEEGRSLFRLMRDKYGIEPKIEHYGCMVNLLGRAGH 425
Query: 421 LEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNI 480
LEEAY LVKNM+IAADPVLWG+LLGSCRLH NIKLGEEIAEFLVDQKLA+SGTYVLLSN+
Sbjct: 426 LEEAYALVKNMTIAADPVLWGTLLGSCRLHVNIKLGEEIAEFLVDQKLAHSGTYVLLSNM 485
Query: 481 YAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEI 540
YAATGNWEGVAKMRTLMKEHGIEKE GCSSIEVNNKVHEF+AGERKHPKSKEIYVM NEI
Sbjct: 486 YAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVNNKVHEFVAGERKHPKSKEIYVMSNEI 545
Query: 541 NSWLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC 600
NSWLKAR YT Q VVLHDL EEQK+Q LEVHSEKLAIAFGLIST+PGTTIKIVKNLRVC
Sbjct: 546 NSWLKARGYTSQTDVVLHDLREEQKEQLLEVHSEKLAIAFGLISTKPGTTIKIVKNLRVC 605
Query: 601 LDCHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
DCH VMKLISEITGRKIVMRDRNRFHHFE+GLCSCGDYW
Sbjct: 606 SDCHTVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
BLAST of Cla013988 vs. NCBI nr
Match:
gi|449448280|ref|XP_004141894.1| (PREDICTED: pentatricopeptide repeat-containing protein ELI1, chloroplastic [Cucumis sativus])
HSP 1 Score: 1154.8 bits (2986), Expect = 0.0e+00
Identity = 572/640 (89.38%), Postives = 605/640 (94.53%), Query Frame = 1
Query: 1 MSSSSFFTASLPSPPPIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQ 60
MSSSS FTAS PSPP IFTTNRSSVLPSSSSTARTSDR Q+VERFA LIDKSKSV LLQ
Sbjct: 6 MSSSSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSVAHLLQ 65
Query: 61 IHASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRL 120
IHASLLR G YHNPILNFKLQRSYAALGRLD SV VF+T DEPNVFSFSAIIHSHVQ RL
Sbjct: 66 IHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRL 125
Query: 121 FDRALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDV 180
FDRA GYYSQML+ GVEPN FTFSSVLKSCSLE GKVLHCQAIKLG SDLYVRTGLVDV
Sbjct: 126 FDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDV 185
Query: 181 YARGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMI 240
YARGGDVVCARQLFDKMPERSLVS T ML CY+K+GELD+AR+LF+GMK+RDVVCWNVMI
Sbjct: 186 YARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMI 245
Query: 241 GGYAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQ 300
GGYAQ+G+PNESLKLFRRMLVAKA+PNE+T+LAVLSACGQLGALESGRW+HSYIENKGIQ
Sbjct: 246 GGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQ 305
Query: 301 INVHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEM 360
INVHVGTALIDMYSKCGSLEDARLVFD IRDKDVVAWNSMIVGY+MHGFSQ+AL+LFEEM
Sbjct: 306 INVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEM 365
Query: 361 TETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGH 420
TETG++PTDITFIG+LSAC HGGLVEEGRSFFRLMRDKY IEPK+EHYGCMVNLLGRAGH
Sbjct: 366 TETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGH 425
Query: 421 LEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNI 480
LEEAY LVKNM+IAADPVLWG+LLG CRLH NIKLGEEIA+FLVDQKLANSGTYVLLSN+
Sbjct: 426 LEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNM 485
Query: 481 YAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEI 540
YAATGNWEGVAKMRTLMKEHGIEKE GCSSIEV+NKVHEF+AGERKHPKSKEIYVMLNEI
Sbjct: 486 YAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEI 545
Query: 541 NSWLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC 600
NSWLKAR YTPQ VVLHDL EEQK+QSLEVHSEKLAIAFGLIST+PGTT+KIVKNLRVC
Sbjct: 546 NSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVC 605
Query: 601 LDCHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
DCH VMK+ISEITGRKIVMRDRNRFHHFE+GLCSCGDYW
Sbjct: 606 SDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
BLAST of Cla013988 vs. NCBI nr
Match:
gi|703156713|ref|XP_010111526.1| (hypothetical protein L484_001076 [Morus notabilis])
HSP 1 Score: 973.8 bits (2516), Expect = 1.5e-280
Identity = 477/640 (74.53%), Postives = 545/640 (85.16%), Query Frame = 1
Query: 1 MSSSSFFTASLPSPPPIFTTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQ 60
M S++ FT+ P PPP +T S PS V+RFA L+D S+S+ RLLQ
Sbjct: 1 MISTTSFTSLSPPPPP--STTASHPPPS-------------VDRFAFLLDNSRSITRLLQ 60
Query: 61 IHASLLRHGHYHNPILNFKLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRL 120
HASLLRHG + +PILNFKLQRSYAALGRLDYSVA+F + PNVF ++++IH+H Q L
Sbjct: 61 THASLLRHGFHDHPILNFKLQRSYAALGRLDYSVALFRRTPRPNVFFWTSLIHAHAQSGL 120
Query: 121 FDRALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDV 180
D+AL YY++MLT+GV+PN FTFS+VLK CSLEPG+ LHCQAIKLGFDSDLYVRTGLVDV
Sbjct: 121 HDQALLYYAEMLTQGVDPNCFTFSTVLKVCSLEPGRALHCQAIKLGFDSDLYVRTGLVDV 180
Query: 181 YARGGDVVCARQLFDKMPERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMI 240
YAR DV A+ LFD MPERSLVS TAM+ CYAK G++DEARALFD M RDVVCWNVMI
Sbjct: 181 YARARDVWSAQHLFDTMPERSLVSLTAMITCYAKHGKVDEARALFDRMGDRDVVCWNVMI 240
Query: 241 GGYAQNGLPNESLKLFRRMLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQ 300
GYAQ+G+PNESL LFR+ML AK PNE+T+LAVLSACGQ+GALESGRW+H+Y+ N IQ
Sbjct: 241 DGYAQHGMPNESLFLFRKMLAAKVRPNEVTVLAVLSACGQIGALESGRWLHTYMANNRIQ 300
Query: 301 INVHVGTALIDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEM 360
INVHVGTALIDMYSKCGSLEDARLVFD IRDKDV+AWN+MIVGY+MHGFSQ+AL+LF EM
Sbjct: 301 INVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVIAWNTMIVGYAMHGFSQDALQLFNEM 360
Query: 361 TETGYQPTDITFIGLLSACSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGH 420
GYQPTDITFIG+LSAC+H GLV +G+ FF LM+D+Y I+ KVEHYGCMVNLL RAGH
Sbjct: 361 CRIGYQPTDITFIGVLSACAHAGLVSQGQEFFGLMKDEYGIKLKVEHYGCMVNLLSRAGH 420
Query: 421 LEEAYELVKNMSIAADPVLWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNI 480
LEEAYEL+KNM I DPVLWG+LLG+CRLHGN LGEEIAEFLV Q LANSGTY+LLSNI
Sbjct: 421 LEEAYELIKNMDINPDPVLWGTLLGACRLHGNAALGEEIAEFLVSQDLANSGTYILLSNI 480
Query: 481 YAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEI 540
YAA+GNW+GVAK+RTLMKE GI+KEPGCSSIEVNNK+HEFLAG+++HPKSK+IY ML EI
Sbjct: 481 YAASGNWDGVAKVRTLMKESGIQKEPGCSSIEVNNKIHEFLAGDKRHPKSKQIYKMLEEI 540
Query: 541 NSWLKARRYTPQIGVVLHDLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC 600
N WLKA YTPQ +VLHDLGE QK+QSLEVHSEKLAIAFGLIST+PGTTI++VKNLRVC
Sbjct: 541 NDWLKANGYTPQTDIVLHDLGERQKEQSLEVHSEKLAIAFGLISTKPGTTIRVVKNLRVC 600
Query: 601 LDCHAVMKLISEITGRKIVMRDRNRFHHFENGLCSCGDYW 641
DCHAV KLIS+ITGRKIVMRDRNRFHHFENG CSCGDYW
Sbjct: 601 PDCHAVTKLISKITGRKIVMRDRNRFHHFENGSCSCGDYW 625
BLAST of Cla013988 vs. NCBI nr
Match:
gi|1009172620|ref|XP_015867371.1| (PREDICTED: pentatricopeptide repeat-containing protein ELI1, chloroplastic [Ziziphus jujuba])
HSP 1 Score: 955.3 bits (2468), Expect = 5.4e-275
Identity = 460/622 (73.95%), Postives = 536/622 (86.17%), Query Frame = 1
Query: 19 TTNRSSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQIHASLLRHGHYHNPILNF 78
TTN + +LP S T +TS V+R A LID+SKS++ LL+ HA+LLRHG +++ ILNF
Sbjct: 3 TTNVTPILPPSPFT-KTSHPQHSVDRLAFLIDRSKSINHLLETHAALLRHGFHNHSILNF 62
Query: 79 KLQRSYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEP 138
KLQRSYA+LGRLDYSVA+F+ + PNV+ ++A+I+ HVQC L D A+ YY+QMLT V+P
Sbjct: 63 KLQRSYASLGRLDYSVALFNRAHNPNVYFWTALINGHVQCGLHDNAILYYTQMLTHSVQP 122
Query: 139 NVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDVYARGGDVVCARQLFDKMP 198
N FTFSS+LKSC LEPGK LH QAIK G DSDLYVRTGLVDVYAR GD+ A++LF+ MP
Sbjct: 123 NCFTFSSLLKSCPLEPGKALHSQAIKFGVDSDLYVRTGLVDVYARAGDIWSAQELFNTMP 182
Query: 199 ERSLVSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMIGGYAQNGLPNESLKLFRR 258
E+SLVS T M+ CYAK GELD+A LF+GM+ RDVVCWNVMI GY Q+G+PNE+L LFR+
Sbjct: 183 EKSLVSLTTMITCYAKYGELDKALVLFNGMEDRDVVCWNVMIDGYTQHGMPNEALLLFRK 242
Query: 259 MLVAKAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQINVHVGTALIDMYSKCGS 318
ML AK PNEIT+L+VLSACGQLGAL+SGRW+H+Y+EN GIQ+NV V TALIDMYSKCG+
Sbjct: 243 MLSAKVKPNEITVLSVLSACGQLGALDSGRWIHTYMENNGIQVNVRVATALIDMYSKCGN 302
Query: 319 LEDARLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTETGYQPTDITFIGLLSA 378
LEDARLVFD I KDVVAWNSMIVGY++HG SQ+ L+LF EM TGY+PTD+TFIG+LSA
Sbjct: 303 LEDARLVFDRIDSKDVVAWNSMIVGYAIHGCSQDTLQLFNEMCRTGYRPTDVTFIGILSA 362
Query: 379 CSHGGLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGHLEEAYELVKNMSIAADPV 438
CSH GLV +GR FF M+D+Y IEPK+EHYGCMVNLL RAGHLEEAY LVKNM+I ADPV
Sbjct: 363 CSHAGLVSQGREFFSSMKDEYGIEPKIEHYGCMVNLLSRAGHLEEAYALVKNMNIEADPV 422
Query: 439 LWGSLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYAATGNWEGVAKMRTLMK 498
LWG+LLG+C LHGNI LGEEIAEFLV + LANSGTY+LLSNIYAA GNWEGVA++R+LMK
Sbjct: 423 LWGTLLGACTLHGNIALGEEIAEFLVSRDLANSGTYILLSNIYAAAGNWEGVARVRSLMK 482
Query: 499 EHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINSWLKARRYTPQIGVVLH 558
+ GI+KEPGCSSIEVNNK+HEFLAG+RKHPKSKEIY+ML+EIN WLKA YTPQ +VLH
Sbjct: 483 DGGIQKEPGCSSIEVNNKIHEFLAGDRKHPKSKEIYMMLDEINGWLKAYGYTPQTDIVLH 542
Query: 559 DLGEEQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVCLDCHAVMKLISEITGRKI 618
DL E QK++SLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC+DCHAV KLIS+ITGRKI
Sbjct: 543 DLEERQKEKSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVCVDCHAVTKLISKITGRKI 602
Query: 619 VMRDRNRFHHFENGLCSCGDYW 641
VMRDRNRFHHFENG CSCGDYW
Sbjct: 603 VMRDRNRFHHFENGSCSCGDYW 623
BLAST of Cla013988 vs. NCBI nr
Match:
gi|645220066|ref|XP_008238575.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g37380, chloroplastic [Prunus mume])
HSP 1 Score: 954.9 bits (2467), Expect = 7.1e-275
Identity = 459/618 (74.27%), Postives = 528/618 (85.44%), Query Frame = 1
Query: 23 SSVLPSSSSTARTSDRSQQVERFALLIDKSKSVDRLLQIHASLLRHGHYHNPILNFKLQR 82
SS P ++T ++R L+DKSKS++ LLQ HA LLRHG +H+PILNFKLQR
Sbjct: 3 SSTTPLVTTTPTHRQHPPSIDRLTFLVDKSKSINHLLQTHALLLRHGLHHHPILNFKLQR 62
Query: 83 SYAALGRLDYSVAVFDTSDEPNVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFT 142
SYA+LGRLDY+VA+F + P+VF +++IIHSH QC L D L YY+QMLT GVEPN FT
Sbjct: 63 SYASLGRLDYTVALFQRTHNPSVFFWTSIIHSHAQCGLHDLGLMYYTQMLTNGVEPNCFT 122
Query: 143 FSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSL 202
S+V+K+C L PGK LH Q IKLGFDSDLYVRTGLVDVYAR GDVV ARQLFD MPE+SL
Sbjct: 123 LSAVMKTCPLRPGKALHSQTIKLGFDSDLYVRTGLVDVYARAGDVVSARQLFDTMPEKSL 182
Query: 203 VSQTAMLACYAKLGELDEARALFDGMKQRDVVCWNVMIGGYAQNGLPNESLKLFRRMLVA 262
VS TAM+ CYAK GE++EAR LFDGM++RDVVCWNVMI GYAQ+G+PNE+L LFR+MLVA
Sbjct: 183 VSLTAMITCYAKRGEVEEARVLFDGMEERDVVCWNVMIDGYAQHGMPNEALLLFRKMLVA 242
Query: 263 KAMPNEITILAVLSACGQLGALESGRWVHSYIENKGIQINVHVGTALIDMYSKCGSLEDA 322
K PNE+T+L++LSACGQLGALESGRW+HSYIEN GIQ+N H GTALIDMYSKCGSLEDA
Sbjct: 243 KIKPNELTVLSLLSACGQLGALESGRWLHSYIENNGIQVNAHAGTALIDMYSKCGSLEDA 302
Query: 323 RLVFDGIRDKDVVAWNSMIVGYSMHGFSQNALKLFEEMTETGYQPTDITFIGLLSACSHG 382
RLVFD I +KDVVAWNSMIVGY+MHGFS++AL+LF EM QPTDITFIG+LSAC++
Sbjct: 303 RLVFDMIDEKDVVAWNSMIVGYAMHGFSRDALQLFHEMCRLSCQPTDITFIGVLSACAYA 362
Query: 383 GLVEEGRSFFRLMRDKYLIEPKVEHYGCMVNLLGRAGHLEEAYELVKNMSIAADPVLWGS 442
GLV EGR+FF M+D+Y IEPK+EHYGC+VNLL RAG LEEAYE VKNM I DPVLWG+
Sbjct: 363 GLVSEGRAFFSSMKDEYGIEPKIEHYGCVVNLLSRAGQLEEAYEFVKNMKIDPDPVLWGT 422
Query: 443 LLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYAATGNWEGVAKMRTLMKEHGI 502
LLG+CRLHGNI LGEEIAEFL+ Q LANSGT++LLSNIYAA GNW+GVA++RTLMK GI
Sbjct: 423 LLGACRLHGNITLGEEIAEFLLGQNLANSGTFILLSNIYAAAGNWDGVARVRTLMKHSGI 482
Query: 503 EKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINSWLKARRYTPQIGVVLHDLGE 562
+KEPGCSSIEV+NKVHEFLAG+R+ P+SKEIY+M+ E+N WLKA YTPQI VLHDLGE
Sbjct: 483 QKEPGCSSIEVDNKVHEFLAGDRRSPRSKEIYMMIKEMNQWLKAHGYTPQIDTVLHDLGE 542
Query: 563 EQKKQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVCLDCHAVMKLISEITGRKIVMRD 622
+K+QSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC DCHAV KLIS+ITGRKIVMRD
Sbjct: 543 REKEQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVCSDCHAVTKLISKITGRKIVMRD 602
Query: 623 RNRFHHFENGLCSCGDYW 641
RNRFHHF NG CSCGDYW
Sbjct: 603 RNRFHHFANGSCSCGDYW 620
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PP354_ARATH | 4.8e-215 | 58.89 | Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... | [more] |
PP425_ARATH | 2.6e-144 | 43.59 | Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN... | [more] |
PP175_ARATH | 1.3e-138 | 43.87 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
PP449_ARATH | 6.9e-137 | 42.17 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN... | [more] |
PPR21_ARATH | 1.2e-136 | 42.28 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
W9SWM1_9ROSA | 1.0e-280 | 74.53 | Uncharacterized protein OS=Morus notabilis GN=L484_001076 PE=4 SV=1 | [more] |
F6HSW6_VITVI | 1.0e-272 | 72.50 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g00680 PE=4 SV=... | [more] |
U5G4L9_POPTR | 6.1e-265 | 70.98 | Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s10370g PE=4 SV=1 | [more] |
A0A0D2SWX6_GOSRA | 2.8e-262 | 69.84 | Uncharacterized protein OS=Gossypium raimondii GN=B456_008G079500 PE=4 SV=1 | [more] |
A0A061DGV0_THECC | 3.7e-262 | 70.47 | Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao GN=TC... | [more] |