CsGy5G004520 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACAGCCTACTCCAAAATTCCGAGACCCAACCCACCGCGCCCGCCGAAACAAGAACACGAATCTCCGAATGGGTTACACAAACCGTCGACGGATCCACCGTCCACGGCGTCGAAAACGAGCTTCTAGTTCTACAGAAAATGCTCGACATACCACCTATCAGCGGCGGCGGAAACGGCTTCAGAGCAATCGGAATCATCGGAGTACGAGGTATCGGAAAGTCAACAATTTCTCGAGCCTTTCTCCAAAACCCAGAAGTAAAATCCAAGTTCCTCCCCAGAATTTGGATCTCAATGTCGGAAAATTTCACAGAAGACGCCGATCCCAAAATCGCTCTTCTGAAGAGAATCCTAATCTCTCTCGGAGTTGACACGAAGTTTCCCGGTGGCGAAACACTCGGCAGCCTCCTCTACGCTCTCCGACTTCAACTGAGAGGGAAACGGTATCTGATTGTACTGGATGATGTTCAAGAGTTTAAAACAGAGGAAGAACAGAATGATTGGTACTGGGATTTGAATTCTTGTGAGAAAAATGGGGAGAAATTAAGAGATGGGTTTCCGAAAGGGAATGGAGGAGCTGTGATTTTGACGAGTAGAAGTGAGAAAGCTGCAAAAGCTATGGTAGGAGAGGGAAATTTGAGGTGTTTGGTTCCTCATAAAGACCCAGAAAGTTTCTGGGAAATTTTCCGGCAAGAAGTTGTGAAAGATGGAATTTCGATCCCTGATGAAATCCTGAACTTCAAGGAATTGAAAGTGAAATTGCTGAAGAAATGTGGTGGACTTCCGTTGATCGCTAAGATGATGGGAGAGATTCAATTCAAAAAAGAACTAGAAAAGAAGAAAAATACAGAACAACAACGACGAGAAGAAGAAGATCGATGATTAAAATTAGCAATCAATTTCTTTTATATCTTTGTTGAACTAAAATTTTTCATGTTTGTATGTTTCTTAAACTACCACTTTCCCTCTGTTGTTGTTAGTTTGATTAAAGATTTCTTAACCAAATGATAATTTGTTGTTAATGAATCATAAATCTTAAATAATTAATAATAATGATTTTGGTGAAAAATAAATACATAAATTTAATACTCAAAATAGTAAAACTATAATGTAAATTTGGTTTCACACATTGAATATAAGAAAAGGCATATGGGCAATAATATTATAATGTAAGATGCTTGATAGAAAGATAAAGCAAAAAACTATAATATAATTCAATTAATTATATTAAATAACATGAAAGTTTATATCGAAATTAATTGATAAGAAGATAAATAGTTCAATCTTATAAATACGAGATTGCAATAGGTTTTTAATACAAAAATGACAACATGTCCAATCAAATGTTTCTCACTAGATTCATTATTGCAATAGGTTTTTAATACAAAAATGACAACATGTCCAATAAAATGTTTCTCATTAGATTCATTATTTTGGTTCTGCAGATTTCGATTTTTGTTTTTAG ATGAACAGCCTACTCCAAAATTCCGAGACCCAACCCACCGCGCCCGCCGAAACAAGAACACGAATCTCCGAATGGGTTACACAAACCGTCGACGGATCCACCGTCCACGGCGTCGAAAACGAGCTTCTAGTTCTACAGAAAATGCTCGACATACCACCTATCAGCGGCGGCGGAAACGGCTTCAGAGCAATCGGAATCATCGGAGTACGAGGTATCGGAAAGTCAACAATTTCTCGAGCCTTTCTCCAAAACCCAGAAGTAAAATCCAAGTTCCTCCCCAGAATTTGGATCTCAATGTCGGAAAATTTCACAGAAGACGCCGATCCCAAAATCGCTCTTCTGAAGAGAATCCTAATCTCTCTCGGAGTTGACACGAAGTTTCCCGGTGGCGAAACACTCGGCAGCCTCCTCTACGCTCTCCGACTTCAACTGAGAGGGAAACGGTATCTGATTGTACTGGATGATGTTCAAGAGTTTAAAACAGAGGAAGAACAGAATGATTGGTACTGGGATTTGAATTCTTGTGAGAAAAATGGGGAGAAATTAAGAGATGGGTTTCCGAAAGGGAATGGAGGAGCTGTGATTTTGACGAGTAGAAATTTCGATTTTTGTTTTTAG ATGAACAGCCTACTCCAAAATTCCGAGACCCAACCCACCGCGCCCGCCGAAACAAGAACACGAATCTCCGAATGGGTTACACAAACCGTCGACGGATCCACCGTCCACGGCGTCGAAAACGAGCTTCTAGTTCTACAGAAAATGCTCGACATACCACCTATCAGCGGCGGCGGAAACGGCTTCAGAGCAATCGGAATCATCGGAGTACGAGGTATCGGAAAGTCAACAATTTCTCGAGCCTTTCTCCAAAACCCAGAAGTAAAATCCAAGTTCCTCCCCAGAATTTGGATCTCAATGTCGGAAAATTTCACAGAAGACGCCGATCCCAAAATCGCTCTTCTGAAGAGAATCCTAATCTCTCTCGGAGTTGACACGAAGTTTCCCGGTGGCGAAACACTCGGCAGCCTCCTCTACGCTCTCCGACTTCAACTGAGAGGGAAACGGTATCTGATTGTACTGGATGATGTTCAAGAGTTTAAAACAGAGGAAGAACAGAATGATTGGTACTGGGATTTGAATTCTTGTGAGAAAAATGGGGAGAAATTAAGAGATGGGTTTCCGAAAGGGAATGGAGGAGCTGTGATTTTGACGAGTAGAAATTTCGATTTTTGTTTTTAG MNSLLQNSETQPTAPAETRTRISEWVTQTVDGSTVHGVENELLVLQKMLDIPPISGGGNGFRAIGIIGVRGIGKSTISRAFLQNPEVKSKFLPRIWISMSENFTEDADPKIALLKRILISLGVDTKFPGGETLGSLLYALRLQLRGKRYLIVLDDVQEFKTEEEQNDWYWDLNSCEKNGEKLRDGFPKGNGGAVILTSRNFDFCF
BLAST of CsGy5G004520 vs. NCBI nr
Match: XP_004152419.2 (PREDICTED: probable disease resistance protein At4g19060 [Cucumis sativus] >KGN50285.1 hypothetical protein Csa_5G165310 [Cucumis sativus]) HSP 1 Score: 400.2 bits (1027), Expect = 4.2e-108 Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CsGy5G004520 vs. NCBI nr
Match: XP_008437034.1 (PREDICTED: probable disease resistance protein At4g19060 [Cucumis melo]) HSP 1 Score: 354.0 bits (907), Expect = 3.5e-94 Identity = 176/200 (88.00%), Postives = 186/200 (93.00%), Query Frame = 0
BLAST of CsGy5G004520 vs. NCBI nr
Match: XP_022996103.1 (probable disease resistance protein At4g19060 [Cucurbita maxima]) HSP 1 Score: 277.7 bits (709), Expect = 3.1e-71 Identity = 141/202 (69.80%), Postives = 164/202 (81.19%), Query Frame = 0
BLAST of CsGy5G004520 vs. NCBI nr
Match: XP_023521385.1 (probable disease resistance protein At4g19060 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 275.8 bits (704), Expect = 1.2e-70 Identity = 143/202 (70.79%), Postives = 164/202 (81.19%), Query Frame = 0
BLAST of CsGy5G004520 vs. NCBI nr
Match: XP_022958545.1 (probable disease resistance protein At4g19060 [Cucurbita moschata]) HSP 1 Score: 273.1 bits (697), Expect = 7.8e-70 Identity = 141/202 (69.80%), Postives = 163/202 (80.69%), Query Frame = 0
BLAST of CsGy5G004520 vs. TAIR10
Match: AT4G19060.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein) HSP 1 Score: 110.9 bits (276), Expect = 9.2e-25 Identity = 78/194 (40.21%), Postives = 102/194 (52.58%), Query Frame = 0
BLAST of CsGy5G004520 vs. TAIR10
Match: AT5G45440.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein) HSP 1 Score: 109.0 bits (271), Expect = 3.5e-24 Identity = 74/196 (37.76%), Postives = 105/196 (53.57%), Query Frame = 0
BLAST of CsGy5G004520 vs. TAIR10
Match: AT5G45490.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein) HSP 1 Score: 106.7 bits (265), Expect = 1.7e-23 Identity = 71/201 (35.32%), Postives = 102/201 (50.75%), Query Frame = 0
BLAST of CsGy5G004520 vs. TAIR10
Match: AT3G50950.2 (HOPZ-ACTIVATED RESISTANCE 1) HSP 1 Score: 87.0 bits (214), Expect = 1.4e-17 Identity = 55/176 (31.25%), Postives = 97/176 (55.11%), Query Frame = 0
BLAST of CsGy5G004520 vs. TAIR10
Match: AT5G45260.1 (Disease resistance protein (TIR-NBS-LRR class)) HSP 1 Score: 58.5 bits (140), Expect = 5.4e-09 Identity = 50/165 (30.30%), Postives = 78/165 (47.27%), Query Frame = 0
BLAST of CsGy5G004520 vs. Swiss-Prot
Match: sp|Q84WD3|DRL26_ARATH (Probable disease resistance protein At4g19060 OS=Arabidopsis thaliana OX=3702 GN=At4g19060 PE=2 SV=2) HSP 1 Score: 110.9 bits (276), Expect = 1.7e-23 Identity = 78/194 (40.21%), Postives = 102/194 (52.58%), Query Frame = 0
BLAST of CsGy5G004520 vs. Swiss-Prot
Match: sp|Q9FHJ2|DRL34_ARATH (Probable disease resistance protein At5g45440 OS=Arabidopsis thaliana OX=3702 GN=At5g45440 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 6.3e-23 Identity = 74/196 (37.76%), Postives = 105/196 (53.57%), Query Frame = 0
BLAST of CsGy5G004520 vs. Swiss-Prot
Match: sp|Q9FHI7|DRL35_ARATH (Probable disease resistance protein At5g45490 OS=Arabidopsis thaliana OX=3702 GN=At5g45490 PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 3.1e-22 Identity = 71/201 (35.32%), Postives = 102/201 (50.75%), Query Frame = 0
BLAST of CsGy5G004520 vs. Swiss-Prot
Match: sp|Q38834|R13L4_ARATH (Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=RPP13L4 PE=1 SV=2) HSP 1 Score: 87.0 bits (214), Expect = 2.6e-16 Identity = 55/176 (31.25%), Postives = 97/176 (55.11%), Query Frame = 0
BLAST of CsGy5G004520 vs. Swiss-Prot
Match: sp|Q7XA42|RGA1_SOLBU (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2) HSP 1 Score: 63.5 bits (153), Expect = 3.1e-09 Identity = 44/137 (32.12%), Postives = 67/137 (48.91%), Query Frame = 0
BLAST of CsGy5G004520 vs. TrEMBL
Match: tr|A0A0A0KKR5|A0A0A0KKR5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165310 PE=4 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 2.8e-108 Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CsGy5G004520 vs. TrEMBL
Match: tr|A0A1S3ASP5|A0A1S3ASP5_CUCME (probable disease resistance protein At4g19060 OS=Cucumis melo OX=3656 GN=LOC103482583 PE=4 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 2.3e-94 Identity = 176/200 (88.00%), Postives = 186/200 (93.00%), Query Frame = 0
BLAST of CsGy5G004520 vs. TrEMBL
Match: tr|A0A251N8A3|A0A251N8A3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G078500 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.1e-32 Identity = 83/185 (44.86%), Postives = 115/185 (62.16%), Query Frame = 0
BLAST of CsGy5G004520 vs. TrEMBL
Match: tr|M5VUK1|M5VUK1_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppb014730mg PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.1e-32 Identity = 83/185 (44.86%), Postives = 115/185 (62.16%), Query Frame = 0
BLAST of CsGy5G004520 vs. TrEMBL
Match: tr|A0A2P4IP60|A0A2P4IP60_QUESU (Putative disease resistance protein OS=Quercus suber OX=58331 GN=CFP56_49635 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 6.1e-31 Identity = 85/194 (43.81%), Postives = 118/194 (60.82%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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