CsGy2G012060 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGAGGCTCGATTGTTCGAAGCGACAGAGAAACTGAGAGATGCAGTAAAAGGTGAAGCTACTACCATTTTGAGCGAAGCTTGTGAGAATGGCGCTGAGTTCTTAGAGCTCCAATATGAAACCAAAGAAAGAGACTATAGGAATTACAACAGTATCAACGAAGCTCCAAGATTAGCTTCCCATTGTACCACTCCTACATGTTTGCTTAAGGCCCAATGGGCCGGCCCATGTTTCAAATAATTCGTTTCTGGTTTTTCAATAAGAGATAGTTCGATAACAATTATATTCAAGAAAAATTGTAGATAGCAACTCAAAAAAATGACAAAAGACGGCATAAAGAAGAAACACTCCAAAAAGCTAGGTGTACCATTTTTTATAATTATATTAACCTCCAATTTACCCAATGATTATGGGATAATTTGTAGATTGAAAGCAGTATATTTTAATGGCTTCAATATGAGGTCGAATATCGCAGATTTCACAAAAAAAAAAAAAAAATGTATTTTACGAACAACCTTCAACTAGAAATCTATGATTTTGTTGTTGGACAATATTGCAATGTAAAGCACTTATTTTAGCATGTTTAAAAATTGAAACTAGGTAACATTTAATAGGATCCATTTCTTTAGTAAAGGTGGAAGATATGAAGTTGTAGTTTGTACTATAGGTGTTGAATCATTAATGGTAGGCTTTCCTATTACTAGTAATCCTACAGGCTTATTGTTGAATAGACTTGGAATTGATTTATGTGAAACTCGCTTAACTTTCTTTTCATCCCTCTTAGCCTATGATTTTAAGGATTGGTCTTTCCTTTTGTCTAAATTGTCTCATCATCACGTGTCACTAGTTTTGCACTACTTAGAAATTTCAATACCAGTTTATTATATAAGTTGCACATTATTTTATAGCTTCTTAAGGAGACATTGGACAACCGTGTTAGTAGAAACTTTGTTACAAGTTCTTAGTATTTGCTTAAGTGAGAAATATTCTTTAAAGAAAAATGCAACGGTTATATATGCCTAGGAATTATTTAAGGTGTTACAATACATGTTTAGGAGTACAAGCAATTAAGTTCAGTAAGCCTCTTATGGCAATTAAGTTCAGTAAGCCTCTTATGTACTTTTGTTTTATCTCACACGCATCTTGTACATTCCAATATTTCACTATACGTTTTGAAATCAAATTGCTACATGTCCTAAGCCATTTAAAGTGATTCTATGCATGTTTAATAAGTCTCTTAGGCTCTTATGTTTTATCTCGCATGCATCCCACATATATCTTTCACATTCCAAACTTTCACTATGCATTTCAAAATTAAATTGCTACCCCTCCTAAGTCATTTGGAGTGGAGTGTTCTATGCATGTTTAGTAAGTCTCTTATACCCTTATATTTTATCTAGCACATTTCAAACTTTCAATATGGGTTTTAAAATCAAATTGCTATCCCTCTTAAGCTATTTAGAGTGTTTCTATACATATTTAGTAAGTTTTAGGTCCTTATATTTTATCTCGCACACACTCCAAACTTTCACTGTGTGTTTTAAAATTAAATTGCTACATTTTCTAAACGATTTGAAGTGATTCTATACATATTTAGCAAGTATTTTAGACCTTAGAAATTTTATCTCGTACTCATCATCCAACACATTTTAAACTTTCGCCATAGATTTCAGAATGAAATTGCTACCCCTTCTAGTTAGTTTGAAGTCAAAATTTAAAAAATCTATCCCAAAAATCTTTTATACTTTTTTTTTTTTTTTTTTTTTTGCAATCTCCCAAGAATATATTTAATTAGGTTGAAGAAATTAGGAAATTGGGAAATTTGATTTCCTCTCTTCTTCGCCATATTCCGATCTCAGTTCTCTCTCTCGACATCTCTCACTGTCTCGGCTCTCCTAGGCACAGCGCCGCCCACGCACGTCGCCGCCGCTCCGCTGCTGCACCTCCGTCCAACATTCATCCAGCCTCCGTAGTCTTGTGCCGGTGAGCTCTCTTCCATCTCTATATTTCTTTCTGCATACCGTTTCCAACGCGCTGGTCATGAATTTCGAAAAAATGGATTAAAGACGGGCAAGAATGTATAGAATTTAAGGTTGGATGCAATGGAAACGAAAGAATTTTGAAGCTATAAATTTGATTTTTCACCTTAGTTTTAGAAATGAAATTTTGTTCCAACCTTCTTCGTAAAGAGTAAATTGCTGACGCTTTTGATCTCCCCCGATTCTCCTCCTCACTTGGTAATCCATCTCTTTCAGTTTTCTGAGCCCTTCACTCTTCATTGCTCTCTCCACAGCACCCAACAGTTTACAGCAGAAAATTTGTGGTTTGCTACTCGTCCCACTTTCTGTTTCGGTATTGAAATCGTTGCTTATAAAGATTGAACCGAACCCAAAAGGGAGAAACCTGATACGCTTTTCAAGTTTGTTTTTCTTAATTTTGGTGGGTTGAATTCAGAGGATTCGATGGTTTTCACTGCCATTTTCTTCTTTTCTTCCACCTCCGCTGGGGACTTTTCAATTTACGCCTCTCTTTTCTATTTTCGTAGATTATTGTCTTCCCTGTGCCTCATCATTATGAGTTTTTCTAAAAGAGAGAGACATATAGCTTGAACAAGTTTCCCCTCATTAACGGAAGGTTTTCTTCTCGCGGAGTGCCATCCCCATTTTATAGCTTATCTTTCACTTTTTGGGTTCAATGCTTTTAACTCGTGAACAAATTATTGATGATGTTAGATGTTTTATTAAATTTGCATTCACCGCTTAGCTTAAGCTTTTGGCTATCAAGTTGTTTCAGGATGTTATGGGTTCAAGTACTTGCAATGTTTTTTCCTCTCCAATTAATATACATTCACACTTGCTTGGCCAGTAAGGGGAGTGTTAGATATGATATTAAATTTTTCTTCACCCATCAGCTTAAGCTTTTGTGTTGAGCTGGTGATTTAAGAGATGATCTGCATTGTTGAATGTATTTTCCATTTTTATTTCCTTGAATCGTTGCATATTTTGCTGCTAGAAATCATCTTAAAAGGCATTAGCCTATTGAGTTTTCACCCCTAGCTGGTTGGTAGCCCGGTGTATATATCTATTTCCCTGCCCCCTTTTCTAGAAGAGAAACAATGTCATTTCAATGGCATGAAGCGAGAGAATCCTGACACATCTGTAGGTGAATTACATGAACGTTCTCCAATTAGAAATTAGCGAAGGTAGGGTATCTGCATTATGTGTACATAGTATGACAAAGAATTAGGTTCATAAAGTTACCAAAAGAAGAGAGTATCCGTGAAAATTCTATCAAGAGTCAATTTTAAAGTCCTCTTTGCAACCTGGAAAGGGTGACCCGTCAAACTTAAAGTGGGAAAATCAAAGATAGTGTTAGGCTAAGGTATGGAACAATTGAAAGAAGTTAAAATAATATCCCCTATCGACAAGTACAAAGACAGTGAGCAAATAGGTGGATCTCTTAAGCTGCAGAACACATAACACACCAAGATGGAGAAAGGTGCAAGGGAACTAATTGGGATTAGTTTGGTAATAGTAGGGGGCGGTCAGGTAATTAGTTAGGAAGTTGGTTAGGGTATTTGGTTATATATAGAGGTAGGGGGATTGAGGGAAGGAATCAAGTAGTTAGTGATTTACTTACAGCATCATATATTCATATAAATGAACACACAAAACGTTTATGTTTTAGTTTTTGTTGTCAGGATTAGGAATACAAACATAGTCCCATCCTGGCTAGGGAAGGAAAAGATCCATGGTATATAATTGAGGATGCTTATCAGTTATCTCCATTGGACCATTGGTATAATCATTTTTAGGTAAAGTCAAGAGCAAACCATGAGAGCTTATCTTCAGAAGAGTATCTTACCGGTTGCCATTGTCGAAATATGTTGAGGGTCCAAATCATCTTTAACATTTGTTTTTATTGAATAATTTAAACAAATATGGGTTCTTTTACACAGTTTGTAGGCTAAAGTGGCATATGAAAGTTTAGGAACCAAAATGCAATTGATATCTAAGTTCAAGTTCTTGCTTGTATTCTCGTGCATATTAGCATTTCCCAAGAGACTAGACTCTAGGTACTTACTTCCTTGGTTACCGTATATTTAGGTATCTGATATGGACAGCCTAGTGGACTCTTTAAATAACGCATATCAGGAGTTTGTTGCTGGAGCAGCTAATGTTCTTGAAGCAAATGAAGCCTCTGGGGCTCAGAAGACAGCAGCAACAGATGCCGCTCTTGAGAATTTTAAACAAAAATGGGAGCTATTCAGGGTTGCTTGTGATCAAGCAGAGGAGTTTGTAGAGTCTGTGAAGCAAAGGATAGGATCAGAGTGCCTTGTTGACGAGGCCACTGGTTCACTGGCTGGCAAGTCTGGGCAGTCTGCCACCACTAGCCTTCCTCCAATCAGTGCTGTTCGATTGGAACAGATGAGCAAAGCGGTAAGATGGCTCGTGATTGAGTTGCAGCACGGCTCAGGAGCTGCTGCTTCTGCTTCAGCACACTCTCATCAGTCTGCTCCTTTTGATGCTAGATTTACTGAGGATGCAACCCAATAGGTACCTATTATCTTTTGAGGTTATAACGTAACAAGTTCTTGTTTTCTGTTTTGCATGAAATGGCTTTTTTGGTTGGCGGTGGAGCGTTTACTGTGTAAGATAATCGGCTTGAGCTTTAACTATACATGAAAAAGCGGATCCATTTGTTCTGTATCTATTGTTAACTAATATAGTTTCATGTTCTTTGTACTTGTTTGTTTTTCTTGGAGGTTTGGTGGGGAGAAATTGTCTCTAGTATATATACTAATGTGGGGATTCAAAACTAAGGTGTCTCCAGTTTGTGGATTTGATTTCATTTGTGTTATTAAAATGCATAGAAAAATATTTCTATTTAACATTTAGTTTAGGGGTAATTTGAGAGAGTATTATGCAAGATTATAATAATCACGTGCAGCCACCGTAAACCCCTCATTTGCTGTGTACTATTTGTTACACTTTTTGCTAATTGATATTCATCTTTTCTTTATTATTTGATACAATGTTTACTATTTCCTTTCCAAACTAAA ATGGATGAGGCTCGATTGTTCGAAGCGACAGAGAAACTGAGAGATGCAGCACAGCGCCGCCCACGCACGTCGCCGCCGCTCCGCTGCTGCACCTCCGTCCAACATTCATCCAGCCTCCGTAGTCTTGTGCCGGTATCTGATATGGACAGCCTAGTGGACTCTTTAAATAACGCATATCAGGAGTTTGTTGCTGGAGCAGCTAATGTTCTTGAAGCAAATGAAGCCTCTGGGGCTCAGAAGACAGCAGCAACAGATGCCGCTCTTGAGAATTTTAAACAAAAATGGGAGCTATTCAGGGTTGCTTGTGATCAAGCAGAGGAGTTTGTAGAGTCTGTGAAGCAAAGGATAGGATCAGAGTGCCTTGTTGACGAGGCCACTGGTTCACTGGCTGGCAAGTCTGGGCAGTCTGCCACCACTAGCCTTCCTCCAATCAGTGCTGTTCGATTGGAACAGATGAGCAAAGCGGTAAGATGGCTCGTGATTGAGTTGCAGCACGGCTCAGGAGCTGCTGCTTCTGCTTCAGCACACTCTCATCAGTCTGCTCCTTTTGATGCTAGATTTACTGAGGATGCAACCCAATAGGTACCTATTATCTTTTGAGGTTATAACGTAACAAGTTCTTGTTTTCTGTTTTGCATGAAATGGCTTTTTTGGTTGGCGGTGGAGCGTTTACTGTGTAAGATAATCGGCTTGAGCTTTAACTATACATGAAAAAGCGGATCCATTTGTTCTGTATCTATTGTTAACTAATATAGTTTCATGTTCTTTGTACTTGTTTGTTTTTCTTGGAGGTTTGGTGGGGAGAAATTGTCTCTAGTATATATACTAATGTGGGGATTCAAAACTAAGGTGTCTCCAGTTTGTGGATTTGATTTCATTTGTGTTATTAAAATGCATAGAAAAATATTTCTATTTAACATTTAGTTTAGGGGTAATTTGAGAGAGTATTATGCAAGATTATAATAATCACGTGCAGCCACCGTAAACCCCTCATTTGCTGTGTACTATTTGTTACACTTTTTGCTAATTGATATTCATCTTTTCTTTATTATTTGATACAATGTTTACTATTTCCTTTCCAAACTAAA ATGGATGAGGCTCGATTGTTCGAAGCGACAGAGAAACTGAGAGATGCAGCACAGCGCCGCCCACGCACGTCGCCGCCGCTCCGCTGCTGCACCTCCGTCCAACATTCATCCAGCCTCCGTAGTCTTGTGCCGGTATCTGATATGGACAGCCTAGTGGACTCTTTAAATAACGCATATCAGGAGTTTGTTGCTGGAGCAGCTAATGTTCTTGAAGCAAATGAAGCCTCTGGGGCTCAGAAGACAGCAGCAACAGATGCCGCTCTTGAGAATTTTAAACAAAAATGGGAGCTATTCAGGGTTGCTTGTGATCAAGCAGAGGAGTTTGTAGAGTCTGTGAAGCAAAGGATAGGATCAGAGTGCCTTGTTGACGAGGCCACTGGTTCACTGGCTGGCAAGTCTGGGCAGTCTGCCACCACTAGCCTTCCTCCAATCAGTGCTGTTCGATTGGAACAGATGAGCAAAGCGGTAAGATGGCTCGTGATTGAGTTGCAGCACGGCTCAGGAGCTGCTGCTTCTGCTTCAGCACACTCTCATCAGTCTGCTCCTTTTGATGCTAGATTTACTGAGGATGCAACCCAATAG MDEARLFEATEKLRDAAQRRPRTSPPLRCCTSVQHSSSLRSLVPVSDMDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLAGKSGQSATTSLPPISAVRLEQMSKAVRWLVIELQHGSGAAASASAHSHQSAPFDARFTEDATQ
BLAST of CsGy2G012060 vs. NCBI nr
Match: XP_004148855.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 32 [Cucumis sativus] >KGN61780.1 hypothetical protein Csa_2G245440 [Cucumis sativus]) HSP 1 Score: 253.1 bits (645), Expect = 7.8e-64 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of CsGy2G012060 vs. NCBI nr
Match: XP_008457936.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 32 [Cucumis melo]) HSP 1 Score: 248.4 bits (633), Expect = 1.9e-62 Identity = 143/146 (97.95%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of CsGy2G012060 vs. NCBI nr
Match: XP_022986620.1 (mediator of RNA polymerase II transcription subunit 32-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 245.4 bits (625), Expect = 1.6e-61 Identity = 145/156 (92.95%), Postives = 150/156 (96.15%), Query Frame = 0
BLAST of CsGy2G012060 vs. NCBI nr
Match: XP_022986622.1 (mediator of RNA polymerase II transcription subunit 32-like isoform X2 [Cucurbita maxima] >XP_022986623.1 mediator of RNA polymerase II transcription subunit 32-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 235.0 bits (598), Expect = 2.2e-58 Identity = 140/149 (93.96%), Postives = 143/149 (95.97%), Query Frame = 0
BLAST of CsGy2G012060 vs. NCBI nr
Match: XP_022944394.1 (mediator of RNA polymerase II transcription subunit 32-like [Cucurbita moschata] >XP_022944395.1 mediator of RNA polymerase II transcription subunit 32-like [Cucurbita moschata] >XP_022944396.1 mediator of RNA polymerase II transcription subunit 32-like [Cucurbita moschata]) HSP 1 Score: 234.6 bits (597), Expect = 2.9e-58 Identity = 141/151 (93.38%), Postives = 143/151 (94.70%), Query Frame = 0
BLAST of CsGy2G012060 vs. TAIR10
Match: AT1G11760.1 (MED32) HSP 1 Score: 177.6 bits (449), Expect = 7.6e-45 Identity = 98/153 (64.05%), Postives = 113/153 (73.86%), Query Frame = 0
BLAST of CsGy2G012060 vs. Swiss-Prot
Match: sp|Q84VW5|MED32_ARATH (Mediator of RNA polymerase II transcription subunit 32 OS=Arabidopsis thaliana OX=3702 GN=MED32 PE=1 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.4e-43 Identity = 98/153 (64.05%), Postives = 113/153 (73.86%), Query Frame = 0
BLAST of CsGy2G012060 vs. TrEMBL
Match: tr|A0A0A0LIN7|A0A0A0LIN7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G245440 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 5.2e-64 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of CsGy2G012060 vs. TrEMBL
Match: tr|A0A1S3C6T6|A0A1S3C6T6_CUCME (mediator of RNA polymerase II transcription subunit 32 OS=Cucumis melo OX=3656 GN=LOC103497499 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.3e-62 Identity = 143/146 (97.95%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of CsGy2G012060 vs. TrEMBL
Match: tr|A0A2I4GYT8|A0A2I4GYT8_9ROSI (mediator of RNA polymerase II transcription subunit 32 isoform X3 OS=Juglans regia OX=51240 GN=LOC109012066 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 8.8e-56 Identity = 121/146 (82.88%), Postives = 126/146 (86.30%), Query Frame = 0
BLAST of CsGy2G012060 vs. TrEMBL
Match: tr|A0A2I4GYU4|A0A2I4GYU4_9ROSI (mediator of RNA polymerase II transcription subunit 32 isoform X2 OS=Juglans regia OX=51240 GN=LOC109012066 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 8.8e-56 Identity = 121/146 (82.88%), Postives = 126/146 (86.30%), Query Frame = 0
BLAST of CsGy2G012060 vs. TrEMBL
Match: tr|A0A2I4GYU5|A0A2I4GYU5_9ROSI (mediator of RNA polymerase II transcription subunit 32 isoform X1 OS=Juglans regia OX=51240 GN=LOC109012066 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 8.8e-56 Identity = 121/146 (82.88%), Postives = 126/146 (86.30%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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