Cp4.1LG07g02760.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGGATACAGAGGAATTGAAGAAAAACCTGTTCGAGAATCAGAGTTTTTTTTTTTTTAATTCGTATAATATGAATTTCATATTCGATCAAATGAAATCGTAGCGAAACAATATTCAAAAGCCGACGAGTCGGATGTTGCTCTGAAAATCGCTCTCTGTTTTCATTTCACAGGAATTGAACGACATGTCGAAGCCTCTGTTTCTCTCCGTCTTCTTCCTCGCTCATCTCTTCCATCTCTCCCATGGAGATATCGGCACTGCAACGCATTACAGTCCTCCATATTTACGTAAGTTCCATTTCATTTGCATTCTTCATGTTCTTGATTCGCGGTGGTAATTGAATGAATGAATGAAATTTACACAGCCACCGCCTGTGCCGGAAACGATATCTCTCTGTTTCCGGCGAGTAGTCTATTTGCGGCGGCCGGAGAGGGAATATGGGAGAACGGAGCGGCTTGTGGAAGACAATACCTAGTGAGATGCTTCAGCGCCGCCGTGCCGATGTCGTGCGTTCCGGATCAGACGATTCAGGTCACGATAGTCGATCGTGCGATTTCAACGGTGTCGAAGCCGGCGAAAGCGGCTACGACGATGGTGCTGTCAACGACGGCGTATAAATCCATCGTTCAAAGAAATGTGGCCTTCGTGAATGTCGAATTTCGGGAGTGA TGGATACAGAGGAATTGAAGAAAAACCTGTTCGAGAATCAGAGTTTTTTTTTTTTTAATTCGTATAATATGAATTTCATATTCGATCAAATGAAATCGTAGCGAAACAATATTCAAAAGCCGACGAGTCGGATGTTGCTCTGAAAATCGCTCTCTGTTTTCATTTCACAGGAATTGAACGACATGTCGAAGCCTCTGTTTCTCTCCGTCTTCTTCCTCGCTCATCTCTTCCATCTCTCCCATGGAGATATCGGCACTGCAACGCATTACAGTCCTCCATATTTACCCACCGCCTGTGCCGGAAACGATATCTCTCTGTTTCCGGCGAGTAGTCTATTTGCGGCGGCCGGAGAGGGAATATGGGAGAACGGAGCGGCTTGTGGAAGACAATACCTAGTGAGATGCTTCAGCGCCGCCGTGCCGATGTCGTGCGTTCCGGATCAGACGATTCAGGTCACGATAGTCGATCGTGCGATTTCAACGGTGTCGAAGCCGGCGAAAGCGGCTACGACGATGGTGCTGTCAACGACGGCGTATAAATCCATCGTTCAAAGAAATGTGGCCTTCGTGAATGTCGAATTTCGGGAGTGA ATGTCGAAGCCTCTGTTTCTCTCCGTCTTCTTCCTCGCTCATCTCTTCCATCTCTCCCATGGAGATATCGGCACTGCAACGCATTACAGTCCTCCATATTTACCCACCGCCTGTGCCGGAAACGATATCTCTCTGTTTCCGGCGAGTAGTCTATTTGCGGCGGCCGGAGAGGGAATATGGGAGAACGGAGCGGCTTGTGGAAGACAATACCTAGTGAGATGCTTCAGCGCCGCCGTGCCGATGTCGTGCGTTCCGGATCAGACGATTCAGGTCACGATAGTCGATCGTGCGATTTCAACGGTGTCGAAGCCGGCGAAAGCGGCTACGACGATGGTGCTGTCAACGACGGCGTATAAATCCATCGTTCAAAGAAATGTGGCCTTCGTGAATGTCGAATTTCGGGAGTGA MSKPLFLSVFFLAHLFHLSHGDIGTATHYSPPYLPTACAGNDISLFPASSLFAAAGEGIWENGAACGRQYLVRCFSAAVPMSCVPDQTIQVTIVDRAISTVSKPAKAATTMVLSTTAYKSIVQRNVAFVNVEFRE
BLAST of Cp4.1LG07g02760.1 vs. Swiss-Prot
Match: EGC_CITJA (EG45-like domain containing protein OS=Citrus jambhiri GN=CjBAp12 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 6.4e-08 Identity = 43/139 (30.94%), Postives = 65/139 (46.76%), Query Frame = 1
BLAST of Cp4.1LG07g02760.1 vs. TrEMBL
Match: A0A0A0LQ33_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379920 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 7.7e-45 Identity = 94/141 (66.67%), Postives = 109/141 (77.30%), Query Frame = 1
BLAST of Cp4.1LG07g02760.1 vs. TrEMBL
Match: B9IKT6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s01330g PE=4 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 7.5e-40 Identity = 85/130 (65.38%), Postives = 103/130 (79.23%), Query Frame = 1
BLAST of Cp4.1LG07g02760.1 vs. TrEMBL
Match: A0A068U8D9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019532001 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 2.9e-39 Identity = 82/131 (62.60%), Postives = 103/131 (78.63%), Query Frame = 1
BLAST of Cp4.1LG07g02760.1 vs. TrEMBL
Match: A0A061GQI5_THECC (Plant natriuretic peptide A OS=Theobroma cacao GN=TCM_038363 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 3.7e-39 Identity = 81/127 (63.78%), Postives = 101/127 (79.53%), Query Frame = 1
BLAST of Cp4.1LG07g02760.1 vs. TrEMBL
Match: F6H3S8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g04670 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 2.4e-38 Identity = 77/131 (58.78%), Postives = 104/131 (79.39%), Query Frame = 1
BLAST of Cp4.1LG07g02760.1 vs. TAIR10
Match: AT2G18660.1 (AT2G18660.1 plant natriuretic peptide A) HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06 Identity = 29/94 (30.85%), Postives = 43/94 (45.74%), Query Frame = 1
BLAST of Cp4.1LG07g02760.1 vs. NCBI nr
Match: gi|659088769|ref|XP_008445151.1| (PREDICTED: EG45-like domain containing protein 2 [Cucumis melo]) HSP 1 Score: 199.5 bits (506), Expect = 3.7e-48 Identity = 96/135 (71.11%), Postives = 117/135 (86.67%), Query Frame = 1
BLAST of Cp4.1LG07g02760.1 vs. NCBI nr
Match: gi|778672397|ref|XP_011649798.1| (PREDICTED: EG45-like domain containing protein [Cucumis sativus]) HSP 1 Score: 188.0 bits (476), Expect = 1.1e-44 Identity = 94/141 (66.67%), Postives = 109/141 (77.30%), Query Frame = 1
BLAST of Cp4.1LG07g02760.1 vs. NCBI nr
Match: gi|566213631|ref|XP_002324844.2| (hypothetical protein POPTR_0018s01330g [Populus trichocarpa]) HSP 1 Score: 171.4 bits (433), Expect = 1.1e-39 Identity = 85/130 (65.38%), Postives = 103/130 (79.23%), Query Frame = 1
BLAST of Cp4.1LG07g02760.1 vs. NCBI nr
Match: gi|1021555557|ref|XP_016169212.1| (PREDICTED: EG45-like domain containing protein [Arachis ipaensis]) HSP 1 Score: 169.5 bits (428), Expect = 4.1e-39 Identity = 78/127 (61.42%), Postives = 103/127 (81.10%), Query Frame = 1
BLAST of Cp4.1LG07g02760.1 vs. NCBI nr
Match: gi|661891540|emb|CDP04805.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 169.5 bits (428), Expect = 4.1e-39 Identity = 82/131 (62.60%), Postives = 103/131 (78.63%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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