Cp4.1LG02g07940.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG02g07940.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	SAUR-like auxin-responsive protein family
Location	Cp4.1LG02 : 414547 .. 414999 (-)
Sequence length	453

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGCTGGACTCGGGAAATGCAGCAAAATCCGACACATTGTCAGGCTCCGACAAATGCTCCGACGGTGGCGCAACAAGGCACGAATATCCGCCAATCGTATCCCCTCGGACGTACCGGCCGGACACGTGGCCGTTTGCGTTGGAACGAGCTGTCGACGGTTCGTCGTCCGGGCAACTTACTTGAACCACCCGGTTTTCAAGAAGCTTTTAGTCGAAGCAGAAGAGGAATACGGGTTTAGCAATTCAGGCCCCTTGGCAATCCCTTGCGACGAATCGGTTTTCGAAGAAGTGATCCGGTTCATCTCTAGATCCGAGCCACCCAACTCGGGGCGGTTCGTGAAATTGGACGATTGTCAGAGTTACTACCATATCGGAATCAGAAACAGAGTCGATTTCTGGCCGGAATCTCGGCCTTTGCTTCATGGATTGGCCGAGAAATCCATCTGGTAA

mRNA sequence

ATGACGGCTGGACTCGGGAAATGCAGCAAAATCCGACACATTGTCAGGCTCCGACAAATGCTCCGACGGTGGCGCAACAAGGCACGAATATCCGCCAATCGTATCCCCTCGGACGTACCGGCCGGACACGTGGCCGTTTGCGTTGGAACGAGCTGTCGACGGTTCGTCGTCCGGGCAACTTACTTGAACCACCCGGTTTTCAAGAAGCTTTTAGTCGAAGCAGAAGAGGAATACGGGTTTAGCAATTCAGGCCCCTTGGCAATCCCTTGCGACGAATCGGTTTTCGAAGAAGTGATCCGGTTCATCTCTAGATCCGAGCCACCCAACTCGGGGCGGTTCGTGAAATTGGACGATTGTCAGAGTTACTACCATATCGGAATCAGAAACAGAGTCGATTTCTGGCCGGAATCTCGGCCTTTGCTTCATGGATTGGCCGAGAAATCCATCTGGTAA

Coding sequence (CDS)

ATGACGGCTGGACTCGGGAAATGCAGCAAAATCCGACACATTGTCAGGCTCCGACAAATGCTCCGACGGTGGCGCAACAAGGCACGAATATCCGCCAATCGTATCCCCTCGGACGTACCGGCCGGACACGTGGCCGTTTGCGTTGGAACGAGCTGTCGACGGTTCGTCGTCCGGGCAACTTACTTGAACCACCCGGTTTTCAAGAAGCTTTTAGTCGAAGCAGAAGAGGAATACGGGTTTAGCAATTCAGGCCCCTTGGCAATCCCTTGCGACGAATCGGTTTTCGAAGAAGTGATCCGGTTCATCTCTAGATCCGAGCCACCCAACTCGGGGCGGTTCGTGAAATTGGACGATTGTCAGAGTTACTACCATATCGGAATCAGAAACAGAGTCGATTTCTGGCCGGAATCTCGGCCTTTGCTTCATGGATTGGCCGAGAAATCCATCTGGTAA

Protein sequence

MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQSYYHIGIRNRVDFWPESRPLLHGLAEKSIW

Homology

[Close]

BLAST of Cp4.1LG02g07940.1 vs. Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.1e-12
Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 1


Query: 27  KARISANRIPS---DVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSN- 86
           KA  SAN+  S   DV  G++AV VG   RRFV+  +YLN P F+ LL +AEEE+G+ + 
Sbjct: 10  KASFSANQASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHP 69

Query: 87  SGPLAIPCDESVFEEVIRFIS 104
           +G L IPC E VF+ +  F++
Sbjct: 70  NGGLTIPCSEDVFQHITSFLN 90

[Close]

BLAST of Cp4.1LG02g07940.1 vs. Swiss-Prot
Match: SAU40_ARATH (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 8.1e-12
Identity = 34/65 (52.31%), Postives = 43/65 (66.15%), Query Frame = 1


Query: 35  IPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESV 94
           + S VP+GHV V VG    RFVV A  LNHPVF  LL  + +EYG++  G L IPC+  V
Sbjct: 44  VASSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFV 103

Query: 95  FEEVI 100
           FE+V+
Sbjct: 104 FEQVV 108

[Close]

BLAST of Cp4.1LG02g07940.1 vs. Swiss-Prot
Match: SAU71_ARATH (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 36/80 (45.00%), Postives = 45/80 (56.25%), Query Frame = 1


Query: 20  MLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYG 79
           +LR    + R    +  S VP GHV V VG    RFVV A  LNHPVF  LL ++ +EYG
Sbjct: 19  LLRSESQRGRTKKEKHKSWVPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYG 78

Query: 80  FSNSGPLAIPCDESVFEEVI 100
           +   G L IPC   VFE ++
Sbjct: 79  YEQQGVLRIPCHVLVFERIL 98

[Close]

BLAST of Cp4.1LG02g07940.1 vs. Swiss-Prot
Match: SAU72_ARATH (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana GN=SAUR72 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.2e-11
Identity = 34/71 (47.89%), Postives = 40/71 (56.34%), Query Frame = 1


Query: 37  SDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFE 96
           S VP GHV V VG    RFVV A  LNHPVF  LL  + +EYG+   G L IPC   VFE
Sbjct: 48  SSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFE 107

Query: 97  EVIRFISRSEP 108
            ++  +    P
Sbjct: 108 RIMESLRLGLP 118

[Close]

BLAST of Cp4.1LG02g07940.1 vs. Swiss-Prot
Match: SAU36_ARATH (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.8e-11
Identity = 41/89 (46.07%), Postives = 52/89 (58.43%), Query Frame = 1


Query: 16  RLRQMLRR--WRNKARISANRIPSD-VPAGHVAVCVGTS---CRRFVVRATYLNHPVFKK 75
           RL+Q  RR   R  A I  +   +D VP GH+A+ VG     C R +V   Y NHP+F +
Sbjct: 53  RLKQSFRRRSTRRSAYIPVDHKKADPVPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGE 112

Query: 76  LLVEAEEEYGFSNSGPLAIPCDESVFEEV 99
           LL EAE+EYGF + G + IPC  S FE V
Sbjct: 113 LLREAEKEYGFCHEGGITIPCLYSDFERV 141

[Close]

BLAST of Cp4.1LG02g07940.1 vs. TrEMBL
Match: A0A0A0LDJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G866530 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.5e-73
Identity = 136/149 (91.28%), Postives = 141/149 (94.63%), Query Frame = 1


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTS RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQ 120
           YLNHPVFKKLLV+AEEEYGF+N GPLAIPCDESVFEEVIRFISRSE PNSGRFVKLDD Q
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYYHIGIRNRVDFWPESRPLLHGLAEKSI 150
           SY HIGIR  +D WPESRPLLHGLAEKSI
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSI 149

[Close]

BLAST of Cp4.1LG02g07940.1 vs. TrEMBL
Match: A0A061FKF0_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_034196 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.1e-67
Identity = 123/150 (82.00%), Postives = 136/150 (90.67%), Query Frame = 1


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SA RIPSDVP GHVAVCVGTSCRRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSAGRIPSDVPEGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQ 120
           YLNHPVFKKLLV+AEEEYGF+N GPLAIPCDESVFEEVIRFISRSE  +S RFV L+D +
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESGHSARFVNLEDFK 120

Query: 121 SYYHIGIRNRVDFWPESRPLLHGLAEKSIW 151
              H+GIR++++ W ESRPLLHG AEK+IW
Sbjct: 121 GNCHVGIRSQLNLWTESRPLLHGFAEKTIW 150

[Close]

BLAST of Cp4.1LG02g07940.1 vs. TrEMBL
Match: A0A067KXE4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08236 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.4e-66
Identity = 121/150 (80.67%), Postives = 135/150 (90.00%), Query Frame = 1


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+AG GKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGT+ RRFVVRAT
Sbjct: 1   MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTTGRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQ 120
           YLNHPVFKKLLV+AEEEYGFSN GPLAIPCDE+VFEEV+R+ISRSE  NS RF  L+D Q
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFSNQGPLAIPCDETVFEEVLRYISRSESGNSIRFSNLEDFQ 120

Query: 121 SYYHIGIRNRVDFWPESRPLLHGLAEKSIW 151
            Y H+G+R+ +D W ESRPLLHG A+K+IW
Sbjct: 121 RYCHVGVRSTLDLWTESRPLLHGFADKTIW 150

[Close]

BLAST of Cp4.1LG02g07940.1 vs. TrEMBL
Match: A0A067HAW0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043725mg PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 2.3e-66
Identity = 119/150 (79.33%), Postives = 132/150 (88.00%), Query Frame = 1


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+ G GKCSKIRHIVRLRQMLRRWRNKAR+SA RIPSDVPAG+VAVCVGTSCRRFVVRAT
Sbjct: 1   MSVGFGKCSKIRHIVRLRQMLRRWRNKARMSAARIPSDVPAGYVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQ 120
           YLNHPVFKKLLV+AEEEYGF+N GPLAIPCDES+FEE IRFISRSE  +S RFV  +D Q
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESLFEEAIRFISRSESGHSARFVNFEDFQ 120

Query: 121 SYYHIGIRNRVDFWPESRPLLHGLAEKSIW 151
            Y H+G +  +DFW ESRPLLHG+A K+IW
Sbjct: 121 RYCHVGFKKNIDFWTESRPLLHGIASKTIW 150

[Close]

BLAST of Cp4.1LG02g07940.1 vs. TrEMBL
Match: V4SKV7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003150mg PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 6.8e-66
Identity = 118/150 (78.67%), Postives = 131/150 (87.33%), Query Frame = 1


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+ G GKCSKIRHIVRLRQMLRRWRNKAR+SA RIPSDVPAG+VAVCVGTSCRRFVVR T
Sbjct: 1   MSVGFGKCSKIRHIVRLRQMLRRWRNKARMSAARIPSDVPAGYVAVCVGTSCRRFVVRTT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQ 120
           YLNHPVFKKLLV+AEEEYGF+N GPLAIPCDES+FEE IRFISRSE  +S RFV  +D Q
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESLFEEAIRFISRSESGHSARFVNFEDFQ 120

Query: 121 SYYHIGIRNRVDFWPESRPLLHGLAEKSIW 151
            Y H+G +  +DFW ESRPLLHG+A K+IW
Sbjct: 121 RYCHVGFKKNIDFWTESRPLLHGIASKTIW 150

[Close]

BLAST of Cp4.1LG02g07940.1 vs. TAIR10
Match: AT1G75590.1 (AT1G75590.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 220.7 bits (561), Expect = 6.1e-58
Identity = 106/154 (68.83%), Postives = 126/154 (81.82%), Query Frame = 1


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANR---IPSDVPAGHVAVCVGTSCRRFVV 60
           M  GLGKCSKIRHIVRLRQMLRRWR++AR+S++    +PSDVP+GHVAV VG+SCRRFVV
Sbjct: 1   MAGGLGKCSKIRHIVRLRQMLRRWRDQARMSSSFSRCVPSDVPSGHVAVYVGSSCRRFVV 60

Query: 61  RATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLD 120
           RATYLNHPV + LLV+AEEE+GF N GPL IPC+ESVFEE IRFISRS+   S RF   D
Sbjct: 61  RATYLNHPVLRNLLVQAEEEFGFVNQGPLVIPCEESVFEESIRFISRSDSTRSRRFTCPD 120

Query: 121 DCQSYYH-IGIRNRVDFWPESRPLLHGLAEKSIW 151
           D Q   H +GIR+++D W ESRPLLHG+ EK++W
Sbjct: 121 DFQKNCHVVGIRSKLDLWIESRPLLHGVTEKAVW 154

[Close]

BLAST of Cp4.1LG02g07940.1 vs. TAIR10
Match: AT1G19840.1 (AT1G19840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 211.5 bits (537), Expect = 3.7e-55
Identity = 103/153 (67.32%), Postives = 121/153 (79.08%), Query Frame = 1


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISA--NRIPSDVPAGHVAVCVGTSCRRFVVR 60
           M   L KCSKIRHIVRLRQMLRRWRNKAR+S+    +PSDVP+GHVAVCVG+ CRRFVVR
Sbjct: 1   MAGSLVKCSKIRHIVRLRQMLRRWRNKARLSSVSRCVPSDVPSGHVAVCVGSGCRRFVVR 60

Query: 61  ATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDD 120
           A+YLNHP+   LLV+AEEE+GF+N GPL IPC+ESVFEE IRFISRS+   S RF   DD
Sbjct: 61  ASYLNHPIISNLLVQAEEEFGFANQGPLVIPCEESVFEEAIRFISRSDSSRSSRFTCPDD 120

Query: 121 CQSYY-HIGIRNRVDFWPESRPLLHGLAEKSIW 151
            Q     I I++++D   ESRPLLHG+AEK+IW
Sbjct: 121 LQKCNGGIKIKSKLDLMIESRPLLHGVAEKAIW 153

[Close]

BLAST of Cp4.1LG02g07940.1 vs. TAIR10
Match: AT5G10990.1 (AT5G10990.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 203.4 bits (516), Expect = 1.0e-52
Identity = 100/151 (66.23%), Postives = 120/151 (79.47%), Query Frame = 1


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANR--IPSDVPAGHVAVCVGTSCRRFVVR 60
           M  G+GKCSKIRHIV+LRQMLR+WRNKAR+S+ R  +PSDVP+GHVAV VG SCRRFVV 
Sbjct: 1   MAGGIGKCSKIRHIVKLRQMLRQWRNKARMSSVRRSVPSDVPSGHVAVYVGRSCRRFVVL 60

Query: 61  ATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDD 120
           ATYLNHP+   LLV+AEEE+GF+N GPL IPC+ESVFEE IRFI+R     S RF   DD
Sbjct: 61  ATYLNHPILMNLLVKAEEEFGFANQGPLVIPCEESVFEESIRFITR-----SSRFTCTDD 120

Query: 121 CQSYYHIGIRNRVDFWPESRPLLHGLAEKSI 150
            +   H GIR+++D   ESRPLLHG++EK+I
Sbjct: 121 LKKNRHGGIRSKLDLLMESRPLLHGVSEKAI 146

[Close]

BLAST of Cp4.1LG02g07940.1 vs. TAIR10
Match: AT4G34750.1 (AT4G34750.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 157.5 bits (397), Expect = 6.3e-39
Identity = 85/153 (55.56%), Postives = 113/153 (73.86%), Query Frame = 1


Query: 5   LGKCSKIRHIVRLRQMLRRWRNKARI-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYL 64
           +GK +KI  +VR+RQML++W+ KA I S+N  P SDVP GHVAV VG + RR+VVRA +L
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHL 60

Query: 65  NHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSE-PPNSGR----FVKLD 124
           NHP+F++LL EAEEEYGF+N GPLAIPCDES+FE++I  ++R E   +SGR       L+
Sbjct: 61  NHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLE 120

Query: 125 DCQSYYHIGI-RNRVDFWPESRPLLHGLAEKSI 150
           D +   H+G+ +N V    ESRPLL G+AEKS+
Sbjct: 121 DLRRCSHVGLAKNNV----ESRPLLPGIAEKSV 149

[Close]

BLAST of Cp4.1LG02g07940.1 vs. TAIR10
Match: AT2G24400.1 (AT2G24400.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 78.6 bits (192), Expect = 3.7e-15
Identity = 47/135 (34.81%), Postives = 69/135 (51.11%), Query Frame = 1


Query: 7   KCSKIRHIVRLRQMLRRWRNKA---------------------------RISANRIPSDV 66
           K +KIR IV+L+Q+L++WR +A                           R  +    + V
Sbjct: 5   KSNKIREIVKLQQLLKKWRKQAIASKAANNNNEDNNSSGGGSKSIKFLKRTLSFTDVTAV 64

Query: 67  PAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVI 115
           P G++AV VG   +R+ +   YL+H  F  LL EAEEE+GF  +G L IPC+ SVFE ++
Sbjct: 65  PKGYLAVSVGLEKKRYTIPTEYLSHQAFYVLLREAEEEFGFQQAGVLRIPCEVSVFESIL 124

[Close]

BLAST of Cp4.1LG02g07940.1 vs. NCBI nr
Match: gi|778686744|ref|XP_011652445.1| (PREDICTED: auxin-induced protein 6B-like [Cucumis sativus])

HSP 1 Score: 287.7 bits (735), Expect = 1.1e-74
Identity = 137/150 (91.33%), Postives = 142/150 (94.67%), Query Frame = 1


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTS RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQ 120
           YLNHPVFKKLLV+AEEEYGF+N GPLAIPCDESVFEEVIRFISRSE PNSGRFVKLDD Q
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYYHIGIRNRVDFWPESRPLLHGLAEKSIW 151
           SY HIGIR  +D WPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of Cp4.1LG02g07940.1 vs. NCBI nr
Match: gi|659132995|ref|XP_008466498.1| (PREDICTED: auxin-induced protein 6B [Cucumis melo])

HSP 1 Score: 287.3 bits (734), Expect = 1.5e-74
Identity = 136/150 (90.67%), Postives = 142/150 (94.67%), Query Frame = 1


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTS RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQ 120
           YLNHPVFKKLL++AEEEYGF+N GPLAIPCDESVFEEVIRFISRSE PNSGRFVKLDD Q
Sbjct: 61  YLNHPVFKKLLIQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYYHIGIRNRVDFWPESRPLLHGLAEKSIW 151
           SY HIGIR  +D WPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of Cp4.1LG02g07940.1 vs. NCBI nr
Match: gi|700204887|gb|KGN60020.1| (hypothetical protein Csa_3G866530 [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 2.2e-73
Identity = 136/149 (91.28%), Postives = 141/149 (94.63%), Query Frame = 1


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTS RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQ 120
           YLNHPVFKKLLV+AEEEYGF+N GPLAIPCDESVFEEVIRFISRSE PNSGRFVKLDD Q
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYYHIGIRNRVDFWPESRPLLHGLAEKSI 150
           SY HIGIR  +D WPESRPLLHGLAEKSI
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSI 149

[Close]

BLAST of Cp4.1LG02g07940.1 vs. NCBI nr
Match: gi|1009168987|ref|XP_015902955.1| (PREDICTED: auxin-induced protein 6B-like [Ziziphus jujuba])

HSP 1 Score: 265.4 bits (677), Expect = 6.1e-68
Identity = 124/151 (82.12%), Postives = 137/151 (90.73%), Query Frame = 1


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+ GLGKC+KIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVG SCRRFVVRAT
Sbjct: 1   MSVGLGKCTKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGRSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSG-RFVKLDDC 120
           YLNHPVFK LLV+AEEEYGF+N GPLAIPC+ES+FEEV+RFISRSE  NS  RFV L+D 
Sbjct: 61  YLNHPVFKNLLVQAEEEYGFNNHGPLAIPCEESLFEEVLRFISRSESGNSSTRFVNLEDF 120

Query: 121 QSYYHIGIRNRVDFWPESRPLLHGLAEKSIW 151
           Q Y H+GIR+ +DFWP+SRPLLHG AEKSIW
Sbjct: 121 QRYCHVGIRSNLDFWPDSRPLLHGFAEKSIW 151

[Close]

BLAST of Cp4.1LG02g07940.1 vs. NCBI nr
Match: gi|1009135108|ref|XP_015884808.1| (PREDICTED: auxin-induced protein 6B [Ziziphus jujuba])

HSP 1 Score: 263.5 bits (672), Expect = 2.3e-67
Identity = 123/151 (81.46%), Postives = 137/151 (90.73%), Query Frame = 1


Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+ GLGKC+KIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVG SCRRFVVRAT
Sbjct: 1   MSVGLGKCTKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGRSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSG-RFVKLDDC 120
           YLNHPVFK LLV+AEEEYGF+N GPLAIPC+ES+FEEV+RFISRSE  +S  RFV L+D 
Sbjct: 61  YLNHPVFKNLLVQAEEEYGFNNHGPLAIPCEESLFEEVLRFISRSESGSSSTRFVNLEDF 120

Query: 121 QSYYHIGIRNRVDFWPESRPLLHGLAEKSIW 151
           Q Y H+GIR+ +DFWP+SRPLLHG AEKSIW
Sbjct: 121 QRYCHVGIRSNLDFWPDSRPLLHGFAEKSIW 151

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g07940.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AX6B_SOYBN	2.1e-12	46.91	Auxin-induced protein 6B OS=Glycine max PE=2 SV=1	[more]
SAU40_ARATH	8.1e-12	52.31	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana GN=SAUR40 PE=2 SV=1	[more]
SAU71_ARATH	1.1e-11	45.00	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana GN=SAUR71 PE=2 SV=1	[more]
SAU72_ARATH	5.2e-11	47.89	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana GN=SAUR72 PE=2 SV=1	[more]
SAU36_ARATH	6.8e-11	46.07	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana GN=SAUR36 PE=2 SV=1	[more]

BLAST of Cp4.1LG02g07940.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDJ7_CUCSA	1.5e-73	91.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G866530 PE=4 SV=1	[more]
A0A061FKF0_THECC	2.1e-67	82.00	SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_034196 PE=4 ...	[more]
A0A067KXE4_JATCU	1.4e-66	80.67	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08236 PE=4 SV=1	[more]
A0A067HAW0_CITSI	2.3e-66	79.33	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043725mg PE=4 SV=1	[more]
V4SKV7_9ROSI	6.8e-66	78.67	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003150mg PE=4 SV=1	[more]

BLAST of Cp4.1LG02g07940.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G75590.1	6.1e-58	68.83	SAUR-like auxin-responsive protein family	[more]
AT1G19840.1	3.7e-55	67.32	SAUR-like auxin-responsive protein family	[more]
AT5G10990.1	1.0e-52	66.23	SAUR-like auxin-responsive protein family	[more]
AT4G34750.1	6.3e-39	55.56	SAUR-like auxin-responsive protein family	[more]
AT2G24400.1	3.7e-15	34.81	SAUR-like auxin-responsive protein family	[more]

BLAST of Cp4.1LG02g07940.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778686744\|ref\|XP_011652445.1\|	1.1e-74	91.33	PREDICTED: auxin-induced protein 6B-like [Cucumis sativus]	[more]
gi\|659132995\|ref\|XP_008466498.1\|	1.5e-74	90.67	PREDICTED: auxin-induced protein 6B [Cucumis melo]	[more]
gi\|700204887\|gb\|KGN60020.1\|	2.2e-73	91.28	hypothetical protein Csa_3G866530 [Cucumis sativus]	[more]
gi\|1009168987\|ref\|XP_015902955.1\|	6.1e-68	82.12	PREDICTED: auxin-induced protein 6B-like [Ziziphus jujuba]	[more]
gi\|1009135108\|ref\|XP_015884808.1\|	2.3e-67	81.46	PREDICTED: auxin-induced protein 6B [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG02g07940	Cp4.1LG02g07940	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g07940.1:cds:001	Cp4.1LG02g07940.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g07940.1	Cp4.1LG02g07940.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 16..101 score: 1.2
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 5..148 score: 6.0
None	No IPR available	PANTHER	PTHR31374:SF34	F6F9.11 PROTEIN-RELATED	coord: 5..148 score: 6.0