Cp4.1LG16g01680 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGATGGGCGTGGGTATGCACTCTATAAACATGGATGGATGACATGATAGATGAAATATGTTTATAGGATAGAAAATAATGAAAAAGAAAAAGGAAGGAGGAGGAGGAGGCAGCATTGGAGTCCAATGAATGGTGAAAAGAAACAGTGTGGGGCTGAAATAGAGGCATGAAAAACACAGCGAAGGCATGATTGGGAGCTCTTTCCTTACCCCTAAACAGCCCATATCCCAACAAAAACAAAACAATGAAATGGGTGTGTTTTAAGGGAAAAGGCCTTTGATTAATTAACCAAACACACATCAGAATCAAGATCAGCCAAAAGCAAAAAGAGGTAATCTTTTGAAGCCGAATCCCCCAATACCCAATACCCAAATTCCCAAATTCCCAAATCCCAAACACACAAAAATAAAAATGAGACCAAACTTGGCCTCCTTCGGTTCCTCCACACATACAGATACTGCCCCCCCTTTACCCACACAAACCTTCGGACACTAAAAACAAACACTACAGAGAGTGACAGAGAGAGCAATCCAGATGGTGGACACACAGGCTGATCTATGTCCCATGATTTTCTTCTCTGTCTCAGACTATGTTTGAGGTTTTCTGGGTGTTTTAGCAAAAGGGGTTTTGGTGGGTTTTGTGGATTAGTCGCTACACAACTGGTGGTCGGCGGCGGAGGTGGAGGCAGAGGCGGAGGAGGAACTCTCGTGTTATTATGAACAACAGTGGCGGTGGCGGTGAGGATGGGAGTAGGACAGTAGCAGCAACAGCAAGTGGAATGATGGGGATGAATAGGTCACCTTTCACAGTGTTACAGTGGCAGGAGCTGGAGCATCAGGCTCTGATCTTCAAGTATATGATGGCAGGTCTGCCTGTTCCACCGGATCTTGTACTCCCTATTCAGAGGAGTTTCGAGTCCATTTCTCATAGGTTCTTCCATCATCCCACCAGTAATCTTACCTCAACCCTCTCCTTTTTTTTTTATTTTTTATCTCATTTTCTCTCTCTCTTTCTGGGCTCTGTCAGTTTGATTGGTTTCTGTTTGTGTTTGATTTGATTTTGGTGATCTTGTTCATTTCTTGTTTCCCCCTTTCTTTTTCTTCATCTCATTTTTTATGTACAGTTCTTTTCCTCTAATGGGTTCATTTTGATTCATGAATGGTGCTTTTTTTTTAAGTTCCCTTGCTTCAAACACTTAACAATCTTGTATTTCCACTCCCCTTATGTCTATAAGTTCTGAATCTGCAAGTTATATAAGAAATAATGGTGTTTTTCAGCTGAATGAATGAGGGGTTTGGTGTCTAATAACCCTTCATTAGTTTCAATCTTTGTACTGTAATAAATCCCCCAATCTAAAGCCTTAGCTTCATCATTTTGGGTATGTAAAGCCAAGAATATGTTTGAGCTATCTTCGTGTTAGTTCATGTTTTGATATGTGCGAGATTTGTGCAGTGGCTTATTGTTCATTCTATGGGAAGAAGGTGGACCCAGAGCCTGGAAGATGCAGGAGAACTGATGGAAAGAAATGGAGATGCTCCAAAGATGCATATCCAAACTCCAAATACTGTGAGCGCCATATGCACCGTGGCCGAAACCGTTCAAGAAAGCCTGTGGAATCTCAAACAATGACACAATCGTCGTCCACTGCGACATCTCTTACCGCTACTGGAAGCAGTAGCACCGGAGCTGGAAGCTTCCATGGTCTTCCATTGAATGCCTTAAGCAACTCCGAGGCGACTACAACTAGAACCAGCCAGCCTGATTATCCTTTGGACTCCATTCCATATGGAATACCAAGCAAAGATTATAGGTATCGTATAAATCCTCCCTGCAACTTCGTTTTGTCGAATCATATCGCAACGCAAGAACTTATGAACATTCATATCCAATTGCCATGATGTTTGATATCAAATGGGAGGAGTTTCCATGCATTTATTTGCAAGAAAGGAAAAGTTTGCACTCTTGGGGACCATATTCAAGCTATGTGGTGGGAGCCCAAACTGTTCTCTTCTCTGCCATATGTTTTATTGAATGTTTTAAACACACCTTTTTGAATTCTTTTGGATCCAACTCTTTGGGCCCTATTCATTTCTTTTGTTCATAATTTTTTTTGTGTTATCCTAAGTATACATGCTTCACTGATCCTATGATGTCTTGCTTTTATGTTCTTTCCAATTGATGCCGGCCTGACATAGCCATAAAAAATTGTCTTGCTGTTAAAACAATTGTACTAACCCTATTGGTTATATACCTTAGCTCAATATCAAAAGATATCAAGACAGAGAAAGAAATGTCAGTTCTGCTCCAATTCTAGTGGTCTGTAAAGTTGAATTGTCTCTCTTTTTCTCTCTCTCTCTCTCTCTCTCTTTGGCTTTTCTTAGCTCATCTTTTTTACCCTTCAAATTGTCTGTGTCTATGGTAATGTTCCATATTTCGCTGACATTCTGCGATCGATGTTTGCTGAAGAGTAACCGTTCTGATGGTCGTTGGCGTTCACTTTTGTTAACTTTAACTGATAAACTTTTGCGTGATCTGGTTTGTTCTAGGTCGATTCTTGTGAATTTAGGTACGAGTTAGAAAATTCTCGTCGTTATTTGTTTTTTTTTTTCATGGTCCAACATATCGGGTCCTAATGTCGGCGGATGGCTGCCGAGTTCAGTTTTGTTGTTCATAGGGAACAACTCTGACAATCATTATGTTCTTTTGAACTCTTGCTATTTAGCTTTAATTGTTCCTAGCTGCCTCAGTTATTGTGTGAGCTGACTGAACTTATGGAGCTTAATGGGTAAACCATGCTTAAGCTTTCAATCTGTCATCGGTTTGTACCTCGGGGTTTGTACCGGTATTAGGTGGTTTGCTCTCTTCTTTTTCGCATCATAGCGAACATTTTAACTTGCTTATTGTCCTTCACCAAAGCGGCTTAAGCGTCTAGCTTTTGGCTCGACTTTGTGATCGATCTCTTCACGTCTTGAAAGAAGGCCTTTGGACATGTTTTATTTTTCGCTCTTGTCGCACGTTGCTTTACTGGAGCTATGTGAGGAAAAAGTGCCATGTTTTTTTAACTATTTTGATTGTTCTTTCATATACTTATGGACTCCTTAGTTCTGCTATAGATTTGAATCTATCTATTCCATAATTGATATTCTTTGTACTTGCAATATCCTTGATCATAGTCACAAGAAACCTGAATTTTAATAGCTTTGATCCTCCTTTGATGTCTCATCTGTCTGCTAATTTTATTTCTGCTGCTAACACGGTCTCCTTTCGAGCTACTTTCCTTCGACCTTTTCTTTTTCTGGGTCAAGTTCTGATAATCTTGGTCACGCATTGTGATATCCCACATCGGTTAAGGGTGTGGAAACCTTTCCCTAGCAAACGTGTCTTAAAAACTTTGAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCAGTGNGGGGGGGGGGGGGGGGGGGGGGACCTTGTTGGACCTTTCTGGTTAAAGAATCTATGGAACGTGACAGAAGCGCACAGGCTTACAGCCTAAAATATCTCATACTGTCATGGTTCATAGACGGAAATCGAGTAACAGAGAGCCACTTTGATGTCTGGTCGTGTCCGAACCATTGTAGTATACGATTCTCATTTTGTTACTAGTGACAATGGTTGAATTAACATTGAAGCATGTGCATTGGAGGTTAAATTTGCAGTGAAGTTGAGCATATAGATGCAAATTCTCTTCCCTTATTTATGTATTAATTGGATTACAGGTATCTTCAAGGGCTTAGACCTGAGGCTGGAGTGCATAGTTTCTTTTCTGAGGCATCAGGAAGCAGCAGGGCTGTTCAAATGGATGCACCAATGGACAACACATGGCCAATAATGCCATCTCGATCACCGTCTTTCCCGGCATCAAAATCGACTGAAAACTCCATCTTCCAAAGTGGATATCTGCAGCATTCGTTCTTCGGTGGCGAATATCCATCTGGGGAAACTCTGAAACAAGAAGCTCAATCGCTTCAACCGCTCTTCGACGAATGGCCGAGAACTAGGGAGTCATGGACTGGACTCGACGAAAGATCCAATCAAACTTCCTTCTCCACAACACAGCTCTCCATATCAATTCCAATGTCTTCATCCGACTTGTCGACCACAAGCTCGAAATCTCCTCATGGTTAGTACCTGCTTCTACCACGCCTGTTCGGTTTCTTCATGCATATTCTTAGTTCATCCTCAATATCATTCTCCATATATGATTGAAAGCAGCATGATGCTTTGAGAAAATTTTCAAGTTTTATCTCTCAACTTCAATGCCTGAATTTTGAATGCTAGTCGTTTACGTTCGGTATATGTGAGCGAACGTGTCGTTGGAGAATTCTGTTGTATTCTTGTCTTGTTTTCCCTTTGCAGCTCTGTTTTTCGGGGTATCGAAAACTTGGTTATGTGTAAACAATTTGGAAGCTGAATGTTGTTATTAGGCTTGGAATAATACAAAACTATGGCTTGAA TTGATGGGCGTGGGTATGCACTCTATAAACATGGATGGATGACATGATAGATGAAATATGTTTATAGGATAGAAAATAATGAAAAAGAAAAAGGAAGGAGGAGGAGGAGGCAGCATTGGAGTCCAATGAATGGTGAAAAGAAACAGTGTGGGGCTGAAATAGAGGCATGAAAAACACAGCGAAGGCATGATTGGGAGCTCTTTCCTTACCCCTAAACAGCCCATATCCCAACAAAAACAAAACAATGAAATGGGTGTGTTTTAAGGGAAAAGGCCTTTGATTAATTAACCAAACACACATCAGAATCAAGATCAGCCAAAAGCAAAAAGAGGTAATCTTTTGAAGCCGAATCCCCCAATACCCAATACCCAAATTCCCAAATTCCCAAATCCCAAACACACAAAAATAAAAATGAGACCAAACTTGGCCTCCTTCGGTTCCTCCACACATACAGATACTGCCCCCCCTTTACCCACACAAACCTTCGGACACTAAAAACAAACACTACAGAGAGTGACAGAGAGAGCAATCCAGATGGTGGACACACAGGCTGATCTATGTCCCATGATTTTCTTCTCTGTCTCAGACTATGTTTGAGGTTTTCTGGGTGTTTTAGCAAAAGGGGTTTTGGTGGGTTTTGTGGATTAGTCGCTACACAACTGGTGGTCGGCGGCGGAGGTGGAGGCAGAGGCGGAGGAGGAACTCTCGTGTTATTATGAACAACAGTGGCGGTGGCGGTGAGGATGGGAGTAGGACAGTAGCAGCAACAGCAAGTGGAATGATGGGGATGAATAGGTCACCTTTCACAGTGTTACAGTGGCAGGAGCTGGAGCATCAGGCTCTGATCTTCAAGTATATGATGGCAGGTCTGCCTGTTCCACCGGATCTTGTACTCCCTATTCAGAGGAGTTTCGAGTCCATTTCTCATAGGTTCTTCCATCATCCCACCATGGCTTATTGTTCATTCTATGGGAAGAAGGTGGACCCAGAGCCTGGAAGATGCAGGAGAACTGATGGAAAGAAATGGAGATGCTCCAAAGATGCATATCCAAACTCCAAATACTGTGAGCGCCATATGCACCGTGGCCGAAACCGTTCAAGAAAGCCTGTGGAATCTCAAACAATGACACAATCGTCGTCCACTGCGACATCTCTTACCGCTACTGGAAGCAGTAGCACCGGAGCTGGAAGCTTCCATGGTCTTCCATTGAATGCCTTAAGCAACTCCGAGGCGACTACAACTAGAACCAGCCAGCCTGATTATCCTTTGGACTCCATTCCATATGGAATACCAAGCAAAGATTATAGGTATCTTCAAGGGCTTAGACCTGAGGCTGGAGTGCATAGTTTCTTTTCTGAGGCATCAGGAAGCAGCAGGGCTGTTCAAATGGATGCACCAATGGACAACACATGGCCAATAATGCCATCTCGATCACCGTCTTTCCCGGCATCAAAATCGACTGAAAACTCCATCTTCCAAAGTGGATATCTGCAGCATTCGTTCTTCGGTGGCGAATATCCATCTGGGGAAACTCTGAAACAAGAAGCTCAATCGCTTCAACCGCTCTTCGACGAATGGCCGAGAACTAGGGAGTCATGGACTGGACTCGACGAAAGATCCAATCAAACTTCCTTCTCCACAACACAGCTCTCCATATCAATTCCAATGTCTTCATCCGACTTGTCGACCACAAGCTCGAAATCTCCTCATGGTTAGTACCTGCTTCTACCACGCCTGTTCGGTTTCTTCATGCATATTCTTAGTTCATCCTCAATATCATTCTCCATATATGATTGAAAGCAGCATGATGCTTTGAGAAAATTTTCAAGTTTTATCTCTCAACTTCAATGCCTGAATTTTGAATGCTAGTCGTTTACGTTCGGTATATGTGAGCGAACGTGTCGTTGGAGAATTCTGTTGTATTCTTGTCTTGTTTTCCCTTTGCAGCTCTGTTTTTCGGGGTATCGAAAACTTGGTTATGTGTAAACAATTTGGAAGCTGAATGTTGTTATTAGGCTTGGAATAATACAAAACTATGGCTTGAA ATGAACAACAGTGGCGGTGGCGGTGAGGATGGGAGTAGGACAGTAGCAGCAACAGCAAGTGGAATGATGGGGATGAATAGGTCACCTTTCACAGTGTTACAGTGGCAGGAGCTGGAGCATCAGGCTCTGATCTTCAAGTATATGATGGCAGGTCTGCCTGTTCCACCGGATCTTGTACTCCCTATTCAGAGGAGTTTCGAGTCCATTTCTCATAGGTTCTTCCATCATCCCACCATGGCTTATTGTTCATTCTATGGGAAGAAGGTGGACCCAGAGCCTGGAAGATGCAGGAGAACTGATGGAAAGAAATGGAGATGCTCCAAAGATGCATATCCAAACTCCAAATACTGTGAGCGCCATATGCACCGTGGCCGAAACCGTTCAAGAAAGCCTGTGGAATCTCAAACAATGACACAATCGTCGTCCACTGCGACATCTCTTACCGCTACTGGAAGCAGTAGCACCGGAGCTGGAAGCTTCCATGGTCTTCCATTGAATGCCTTAAGCAACTCCGAGGCGACTACAACTAGAACCAGCCAGCCTGATTATCCTTTGGACTCCATTCCATATGGAATACCAAGCAAAGATTATAGGTATCTTCAAGGGCTTAGACCTGAGGCTGGAGTGCATAGTTTCTTTTCTGAGGCATCAGGAAGCAGCAGGGCTGTTCAAATGGATGCACCAATGGACAACACATGGCCAATAATGCCATCTCGATCACCGTCTTTCCCGGCATCAAAATCGACTGAAAACTCCATCTTCCAAAGTGGATATCTGCAGCATTCGTTCTTCGGTGGCGAATATCCATCTGGGGAAACTCTGAAACAAGAAGCTCAATCGCTTCAACCGCTCTTCGACGAATGGCCGAGAACTAGGGAGTCATGGACTGGACTCGACGAAAGATCCAATCAAACTTCCTTCTCCACAACACAGCTCTCCATATCAATTCCAATGTCTTCATCCGACTTGTCGACCACAAGCTCGAAATCTCCTCATGGTTAG MNNSGGGGEDGSRTVAATASGMMGMNRSPFTVLQWQELEHQALIFKYMMAGLPVPPDLVLPIQRSFESISHRFFHHPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPNSKYCERHMHRGRNRSRKPVESQTMTQSSSTATSLTATGSSSTGAGSFHGLPLNALSNSEATTTRTSQPDYPLDSIPYGIPSKDYRYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPIMPSRSPSFPASKSTENSIFQSGYLQHSFFGGEYPSGETLKQEAQSLQPLFDEWPRTRESWTGLDERSNQTSFSTTQLSISIPMSSSDLSTTSSKSPHG
BLAST of Cp4.1LG16g01680 vs. Swiss-Prot
Match: GRF3_ORYSJ (Growth-regulating factor 3 OS=Oryza sativa subsp. japonica GN=GRF3 PE=3 SV=2) HSP 1 Score: 255.8 bits (652), Expect = 6.7e-67 Identity = 153/358 (42.74%), Postives = 212/358 (59.22%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. Swiss-Prot
Match: GRF4_ORYSJ (Growth-regulating factor 4 OS=Oryza sativa subsp. japonica GN=GRF4 PE=2 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 2.8e-65 Identity = 162/368 (44.02%), Postives = 224/368 (60.87%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. Swiss-Prot
Match: GRF5_ORYSJ (Growth-regulating factor 5 OS=Oryza sativa subsp. japonica GN=GRF5 PE=2 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 4.5e-63 Identity = 154/361 (42.66%), Postives = 204/361 (56.51%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. Swiss-Prot
Match: GRF1_ORYSI (Growth-regulating factor 1 OS=Oryza sativa subsp. indica GN=GRF1 PE=2 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 4.0e-43 Identity = 145/393 (36.90%), Postives = 188/393 (47.84%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. Swiss-Prot
Match: GRF1_ORYSJ (Growth-regulating factor 1 OS=Oryza sativa subsp. japonica GN=GRF1 PE=3 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.0e-42 Identity = 144/394 (36.55%), Postives = 190/394 (48.22%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. TrEMBL
Match: A0A0A0LN73_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432230 PE=4 SV=1) HSP 1 Score: 604.4 bits (1557), Expect = 8.6e-170 Identity = 309/335 (92.24%), Postives = 317/335 (94.63%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. TrEMBL
Match: M5XGT1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022199mg PE=4 SV=1) HSP 1 Score: 486.1 bits (1250), Expect = 3.4e-134 Identity = 249/331 (75.23%), Postives = 281/331 (84.89%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. TrEMBL
Match: F6HEC9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g01450 PE=4 SV=1) HSP 1 Score: 479.9 bits (1234), Expect = 2.4e-132 Identity = 239/316 (75.63%), Postives = 272/316 (86.08%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. TrEMBL
Match: A0A067EAQ2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020051mg PE=4 SV=1) HSP 1 Score: 478.4 bits (1230), Expect = 7.1e-132 Identity = 246/335 (73.43%), Postives = 278/335 (82.99%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. TrEMBL
Match: A0A061EZZ6_THECC (Growth-regulating factor 5 OS=Theobroma cacao GN=TCM_025561 PE=4 SV=1) HSP 1 Score: 474.9 bits (1221), Expect = 7.8e-131 Identity = 247/347 (71.18%), Postives = 277/347 (79.83%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. TAIR10
Match: AT3G13960.1 (AT3G13960.1 growth-regulating factor 5) HSP 1 Score: 154.5 bits (389), Expect = 1.2e-37 Identity = 82/166 (49.40%), Postives = 115/166 (69.28%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. TAIR10
Match: AT2G06200.1 (AT2G06200.1 growth-regulating factor 6) HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32 Identity = 71/124 (57.26%), Postives = 86/124 (69.35%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. TAIR10
Match: AT2G36400.1 (AT2G36400.1 growth-regulating factor 3) HSP 1 Score: 136.7 bits (343), Expect = 2.6e-32 Identity = 73/146 (50.00%), Postives = 96/146 (65.75%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. TAIR10
Match: AT4G37740.1 (AT4G37740.1 growth-regulating factor 2) HSP 1 Score: 130.6 bits (327), Expect = 1.8e-30 Identity = 79/172 (45.93%), Postives = 106/172 (61.63%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. TAIR10
Match: AT3G52910.1 (AT3G52910.1 growth-regulating factor 4) HSP 1 Score: 127.5 bits (319), Expect = 1.6e-29 Identity = 77/161 (47.83%), Postives = 101/161 (62.73%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. NCBI nr
Match: gi|659125640|ref|XP_008462790.1| (PREDICTED: growth-regulating factor 4-like [Cucumis melo]) HSP 1 Score: 605.9 bits (1561), Expect = 4.2e-170 Identity = 309/335 (92.24%), Postives = 317/335 (94.63%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. NCBI nr
Match: gi|778673778|ref|XP_011650059.1| (PREDICTED: growth-regulating factor 4-like [Cucumis sativus]) HSP 1 Score: 604.4 bits (1557), Expect = 1.2e-169 Identity = 309/335 (92.24%), Postives = 317/335 (94.63%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. NCBI nr
Match: gi|596032228|ref|XP_007219489.1| (hypothetical protein PRUPE_ppa022199mg [Prunus persica]) HSP 1 Score: 486.1 bits (1250), Expect = 4.9e-134 Identity = 249/331 (75.23%), Postives = 281/331 (84.89%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. NCBI nr
Match: gi|359489864|ref|XP_002270427.2| (PREDICTED: growth-regulating factor 4-like isoform X2 [Vitis vinifera]) HSP 1 Score: 483.8 bits (1244), Expect = 2.4e-133 Identity = 246/332 (74.10%), Postives = 280/332 (84.34%), Query Frame = 1
BLAST of Cp4.1LG16g01680 vs. NCBI nr
Match: gi|297737265|emb|CBI26466.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 481.9 bits (1239), Expect = 9.2e-133 Identity = 242/324 (74.69%), Postives = 276/324 (85.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |