Cp4.1LG10g03320 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTATCACTAATTCAAGGAGGCTTCTCCTTCCCGCCGTGACCGCCAGTCCGCCGGTGTCAGCGCAGCTGCGACCTGGGTTCGGGAGCTTTGACATGAACGTAGTGATGGTCCTTTCGGTTCTCCTCTGTGCTCTAGTTTGCTCTCTGGGTCTCAACGCGATCCTAAAATGCGCGTTGCGGTGTTCCAGTTTGTTGGCAACGATGTCGGGTGGACTTGGCGGTGGGATTTTGGCGGTGCATCCGAAAGGTGTTCGACGAAATGTCTTAAAGAAATTTCCGACGGTGGAATACCCAAAAGAGGGGAATAAATTAAGGGGAATCGATGGGGAATGCGTGATTTGTTTGTCGGAATTCGAGGGTGGGGATCGGGTTCGTGTATTGCCCAAATGCTACCATGGCTTCCACGTTCATTGCATTGATAAATGGCTGAGTTCCCATAATTCTTGCCCCAAGTGCCGCAATTGCCTCACTGACAGTTGCCATAAGATCGCCGCTGGAGGCAGCCAGGAGGCGCCTGACGGCGAGTTCATCGCTATTGACCCGCCACCGCCGCCACCTCCGGGGGAGGAAGTGGTTGTGAATGTTGTTATTGCTCCGGTGGAACGGGAAGGCTTGGTGTGCAACTATAGGTAAAGCAAGTAGTAGATGAGATTGAAGTGGTAAGTGGGGCTGTGGGGTTGGGCTTTTTTTGTGATTGATGGAGCATTTTGGTTCTTTTTGCTTTAGCTTACAAGTAAGCATCTTTTTTTTTTTTTCTTTTTTTCTTTTAATTAATTAGGATTATTACATCTAGCCAAGATTAGGGTACTAAATTCAAATGTAAATACCTCTTCCACTCTTTTCCCCTCAAATAAAAAGGTTTCGGTTATAATTTTCCGATCAATTAGCTCTAAATTTAAACTTTTGTCTTAACATTATTTTCATCCCCACTCTTAAATTAATTTATAAAATTTTAAATTTATTTTAGTAATATTGAAATTTGAGTTTTTAGAACCTATGTGAAATATTATATTATTAAAATATTTTATATTTTTTAAACTATATTGAAAAACATAAAATTTTCATTAAAAATTTCTTTTAAATGAATATATATATAGGAAGACTAAGAATTCTTTGCAGTGACAAGTTTATTACCAATAATGATTATTAAATATAAAAACTATTAAAAGGTCGATAATTAATCTTAAATAATGAATTATCTCTCGATTAGATATTAATTAATATGAAGTCGTGTCACGTGATTAGCGCAATTCCCGTCTAGAATTTGAATGGATCGGAGAAAGAAGGAGTGAAAGGAAGGTGAGAAAAAAGGGGCAAAAAAAAGGAAGGCAAGAGAGGAATGGGAATGGAAGGTGAGAGTGAAAAGCAAAACATAAATTGCACTGAAAAAGGGAGAATTTGGATGATAGAGTTCACATGTTGTGTTTGTTAGAACACATATATAATATATCACATACACCAACCCAAATACCCCAATATATATATATATATATAGAAGCATTGTACCATGTGCAAATGTTCCTTTGTCTTGCTGTCTTTGTGGAATGTTGTTGGTGATGTGTATCTCGAATGTCACCTCGACACATCCCTCTCAACCCCGACCTTTCTAGAACTTTTTTTAACTTGTTTATACTTCATTTGGTAATATTCTCACTCTTAGCTCGTGACATTTCCTATTTTCAATCATAATAAATAATAATAAATGTAAATACATTTTACTTCTAAAGTTAATGTTAAAACTATCTTACTCAGCTTCATAATTTTAAAAACAAATATATATTATTTATAATATTATTTTTTTGTAAAAACTTTTTATCTTTCTCTCTCCTCTCCGCCATAATCCCATCCCCGCCGGCGGCCGCTGCCCGCCAACTTTTCTTCCTTTTTTTTTTCCCTTCTTCTTGACTTCAGGAAGCTATTAGTGACCAAAGCTTCAATCCTGACGGACCCGCCGCCATCCGTGGATGAGCTGAATTCTGTTTGGGCGCCGTAG ATGTCTATCACTAATTCAAGGAGGCTTCTCCTTCCCGCCGTGACCGCCAGTCCGCCGGTGTCAGCGCAGCTGCGACCTGGGTTCGGGAGCTTTGACATGAACGTAGTGATGGTCCTTTCGGTTCTCCTCTGTGCTCTAGTTTGCTCTCTGGGTCTCAACGCGATCCTAAAATGCGCGTTGCGGTGTTCCAGTTTGTTGGCAACGATGTCGGGTGGACTTGGCGGTGGGATTTTGGCGGTGCATCCGAAAGGTGTTCGACGAAATGTCTTAAAGAAATTTCCGACGGTGGAATACCCAAAAGAGGGGAATAAATTAAGGGGAATCGATGGGGAATGCGTGATTTGTTTGTCGGAATTCGAGGGTGGGGATCGGGTTCGTGTATTGCCCAAATGCTACCATGGCTTCCACGTTCATTGCATTGATAAATGGCTGAGTTCCCATAATTCTTGCCCCAAGTGCCGCAATTGCCTCACTGACAGTTGCCATAAGATCGCCGCTGGAGGCAGCCAGGAGGCGCCTGACGGCGAGTTCATCGCTATTGACCCGCCACCGCCGCCACCTCCGGGGGAGGAAGTGGTTGTGAATGTTGTTATTGCTCCGGTGGAACGGGAAGGCTTGGTGTGCAACTATAGGAAGCTATTAGTGACCAAAGCTTCAATCCTGACGGACCCGCCGCCATCCGTGGATGAGCTGAATTCTGTTTGGGCGCCGTAG ATGTCTATCACTAATTCAAGGAGGCTTCTCCTTCCCGCCGTGACCGCCAGTCCGCCGGTGTCAGCGCAGCTGCGACCTGGGTTCGGGAGCTTTGACATGAACGTAGTGATGGTCCTTTCGGTTCTCCTCTGTGCTCTAGTTTGCTCTCTGGGTCTCAACGCGATCCTAAAATGCGCGTTGCGGTGTTCCAGTTTGTTGGCAACGATGTCGGGTGGACTTGGCGGTGGGATTTTGGCGGTGCATCCGAAAGGTGTTCGACGAAATGTCTTAAAGAAATTTCCGACGGTGGAATACCCAAAAGAGGGGAATAAATTAAGGGGAATCGATGGGGAATGCGTGATTTGTTTGTCGGAATTCGAGGGTGGGGATCGGGTTCGTGTATTGCCCAAATGCTACCATGGCTTCCACGTTCATTGCATTGATAAATGGCTGAGTTCCCATAATTCTTGCCCCAAGTGCCGCAATTGCCTCACTGACAGTTGCCATAAGATCGCCGCTGGAGGCAGCCAGGAGGCGCCTGACGGCGAGTTCATCGCTATTGACCCGCCACCGCCGCCACCTCCGGGGGAGGAAGTGGTTGTGAATGTTGTTATTGCTCCGGTGGAACGGGAAGGCTTGGTGTGCAACTATAGGAAGCTATTAGTGACCAAAGCTTCAATCCTGACGGACCCGCCGCCATCCGTGGATGAGCTGAATTCTGTTTGGGCGCCGTAG MSITNSRRLLLPAVTASPPVSAQLRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSSLLATMSGGLGGGILAVHPKGVRRNVLKKFPTVEYPKEGNKLRGIDGECVICLSEFEGGDRVRVLPKCYHGFHVHCIDKWLSSHNSCPKCRNCLTDSCHKIAAGGSQEAPDGEFIAIDPPPPPPPGEEVVVNVVIAPVEREGLVCNYRKLLVTKASILTDPPPSVDELNSVWAP
BLAST of Cp4.1LG10g03320 vs. Swiss-Prot
Match: ATL78_ARATH (RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.4e-42 Identity = 98/199 (49.25%), Postives = 126/199 (63.32%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. Swiss-Prot
Match: ATL10_ARATH (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 1.8e-34 Identity = 90/222 (40.54%), Postives = 128/222 (57.66%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. Swiss-Prot
Match: ATL76_ARATH (E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76 PE=1 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 5.9e-33 Identity = 88/210 (41.90%), Postives = 125/210 (59.52%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. Swiss-Prot
Match: ATL75_ARATH (RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.0e-32 Identity = 83/197 (42.13%), Postives = 117/197 (59.39%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. Swiss-Prot
Match: ATL77_ARATH (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.0e-29 Identity = 79/209 (37.80%), Postives = 117/209 (55.98%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. TrEMBL
Match: A0A0A0KF92_CUCSA (RING-H2 zinc finger protein OS=Cucumis sativus GN=Csa_6G484580 PE=4 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 6.9e-89 Identity = 168/214 (78.50%), Postives = 180/214 (84.11%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. TrEMBL
Match: Q8W550_CUCME (RING-H2 zinc finger protein (Fragment) OS=Cucumis melo PE=2 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 4.2e-78 Identity = 142/162 (87.65%), Postives = 146/162 (90.12%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. TrEMBL
Match: A0A0D2MKD6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G070100 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 3.6e-53 Identity = 118/211 (55.92%), Postives = 145/211 (68.72%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. TrEMBL
Match: A0A061DIQ7_THECC (RING zinc finger protein OS=Theobroma cacao GN=TCM_001369 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 9.1e-49 Identity = 119/219 (54.34%), Postives = 144/219 (65.75%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. TrEMBL
Match: V4UNR8_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10027222mg PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.2e-48 Identity = 115/212 (54.25%), Postives = 141/212 (66.51%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. TAIR10
Match: AT1G49230.1 (AT1G49230.1 RING/U-box superfamily protein) HSP 1 Score: 174.5 bits (441), Expect = 7.9e-44 Identity = 98/199 (49.25%), Postives = 126/199 (63.32%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. TAIR10
Match: AT1G49220.1 (AT1G49220.1 RING/U-box superfamily protein) HSP 1 Score: 147.5 bits (371), Expect = 1.0e-35 Identity = 90/222 (40.54%), Postives = 128/222 (57.66%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. TAIR10
Match: AT1G49210.1 (AT1G49210.1 RING/U-box superfamily protein) HSP 1 Score: 142.5 bits (358), Expect = 3.3e-34 Identity = 88/210 (41.90%), Postives = 125/210 (59.52%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. TAIR10
Match: AT1G49200.1 (AT1G49200.1 RING/U-box superfamily protein) HSP 1 Score: 141.7 bits (356), Expect = 5.7e-34 Identity = 83/197 (42.13%), Postives = 117/197 (59.39%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. TAIR10
Match: AT3G18773.1 (AT3G18773.1 RING/U-box superfamily protein) HSP 1 Score: 131.7 bits (330), Expect = 5.9e-31 Identity = 79/209 (37.80%), Postives = 117/209 (55.98%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. NCBI nr
Match: gi|659080851|ref|XP_008441014.1| (PREDICTED: RING-H2 finger protein ATL78-like [Cucumis melo]) HSP 1 Score: 337.0 bits (863), Expect = 2.6e-89 Identity = 172/217 (79.26%), Postives = 181/217 (83.41%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. NCBI nr
Match: gi|449461825|ref|XP_004148642.1| (PREDICTED: RING-H2 finger protein ATL78-like [Cucumis sativus]) HSP 1 Score: 335.1 bits (858), Expect = 9.9e-89 Identity = 168/214 (78.50%), Postives = 180/214 (84.11%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. NCBI nr
Match: gi|17016985|gb|AAL33552.1|AF436851_1 (RING-H2 zinc finger protein [Cucumis melo]) HSP 1 Score: 299.3 bits (765), Expect = 6.0e-78 Identity = 142/162 (87.65%), Postives = 146/162 (90.12%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. NCBI nr
Match: gi|823140945|ref|XP_012470295.1| (PREDICTED: RING-H2 finger protein ATL78-like [Gossypium raimondii]) HSP 1 Score: 216.5 bits (550), Expect = 5.1e-53 Identity = 118/211 (55.92%), Postives = 145/211 (68.72%), Query Frame = 1
BLAST of Cp4.1LG10g03320 vs. NCBI nr
Match: gi|590708371|ref|XP_007048258.1| (RING zinc finger protein [Theobroma cacao]) HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48 Identity = 119/219 (54.34%), Postives = 144/219 (65.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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