Cp4.1LG07g03270 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG07g03270
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCCR4-NOT transcription complex subunit 7
LocationCp4.1LG07 : 2047387 .. 2048211 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCATATTGCCGAAAGGTGAGTCGATTCATATCCGTGAGGTGTGGAACCATAACGTGGAGGAAGAGTTCGCTCTAATGCGTGAAATTGTCGACAAATTTAATTACATAGCGATGGATACTGAGTTCCCCGGCGTGGTGGTTCGCCCTGTGGGTGCTTTTAAGAATATCAACGATTATAACTATCAAACCCTCAAAGATAATGTCGACACGTTGAAGTTGATTCAGTTGGGTCTTACGTTTTCTGATGAGAATGGGAATCTCCCAACTTGTGGAACAGATAAGTTTTGCATTTGGCAGTTTAATTTCAGGGAGTTCAACATTAGTAACGATATTTTCGCTAGTGATTCCATTGAGCTTTTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATTGATGTCAATCACTTCGGTGAGCTTCTAATGTCATCTGGGATTGTTTTGAACGATAATGTTTACTGGGTGACCTTTCACAGTGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCGAAGCCTACCAGGGACGCAGGCTGCATTCTTTGATTTGATCAATATGTATTTCCCAATGGTTTATGACATCAAGCATTTGATGAAGTTTTGCAACAGTTTCCATGGTGGGCTGAACAAGCTTGCAGAGTTATTAGAAGTGGAAAGGATTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTGAGGGATACTTTTTTCAATGGGTCTACTCAGAAATACGCCGGTGTTTTATATGGTCTGGGCGTTGAAACTGGCCAGACTACTAATTAA

mRNA sequence

ATGTCCATATTGCCGAAAGGTGAGTCGATTCATATCCGTGAGGTGTGGAACCATAACGTGGAGGAAGAGTTCGCTCTAATGCGTGAAATTGTCGACAAATTTAATTACATAGCGATGGATACTGAGTTCCCCGGCGTGGTGGTTCGCCCTGTGGGTGCTTTTAAGAATATCAACGATTATAACTATCAAACCCTCAAAGATAATGTCGACACGTTGAAGTTGATTCAGTTGGGTCTTACGTTTTCTGATGAGAATGGGAATCTCCCAACTTGTGGAACAGATAAGTTTTGCATTTGGCAGTTTAATTTCAGGGAGTTCAACATTAGTAACGATATTTTCGCTAGTGATTCCATTGAGCTTTTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATTGATGTCAATCACTTCGGTGAGCTTCTAATGTCATCTGGGATTGTTTTGAACGATAATGTTTACTGGGTGACCTTTCACAGTGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCGAAGCCTACCAGGGACGCAGGCTGCATTCTTTGATTTGATCAATATGTATTTCCCAATGGTTTATGACATCAAGCATTTGATGAAGTTTTGCAACAGTTTCCATGGTGGGCTGAACAAGCTTGCAGAGTTATTAGAAGTGGAAAGGATTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTGAGGGATACTTTTTTCAATGGGTCTACTCAGAAATACGCCGGTGTTTTATATGGTCTGGGCGTTGAAACTGGCCAGACTACTAATTAA

Coding sequence (CDS)

ATGTCCATATTGCCGAAAGGTGAGTCGATTCATATCCGTGAGGTGTGGAACCATAACGTGGAGGAAGAGTTCGCTCTAATGCGTGAAATTGTCGACAAATTTAATTACATAGCGATGGATACTGAGTTCCCCGGCGTGGTGGTTCGCCCTGTGGGTGCTTTTAAGAATATCAACGATTATAACTATCAAACCCTCAAAGATAATGTCGACACGTTGAAGTTGATTCAGTTGGGTCTTACGTTTTCTGATGAGAATGGGAATCTCCCAACTTGTGGAACAGATAAGTTTTGCATTTGGCAGTTTAATTTCAGGGAGTTCAACATTAGTAACGATATTTTCGCTAGTGATTCCATTGAGCTTTTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATTGATGTCAATCACTTCGGTGAGCTTCTAATGTCATCTGGGATTGTTTTGAACGATAATGTTTACTGGGTGACCTTTCACAGTGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCGAAGCCTACCAGGGACGCAGGCTGCATTCTTTGATTTGATCAATATGTATTTCCCAATGGTTTATGACATCAAGCATTTGATGAAGTTTTGCAACAGTTTCCATGGTGGGCTGAACAAGCTTGCAGAGTTATTAGAAGTGGAAAGGATTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTGAGGGATACTTTTTTCAATGGGTCTACTCAGAAATACGCCGGTGTTTTATATGGTCTGGGCGTTGAAACTGGCCAGACTACTAATTAA

Protein sequence

MSILPKGESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Homology
[Close]
BLAST of Cp4.1LG07g03270 vs. Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 438.0 bits (1125), Expect = 7.8e-122
Identity = 202/272 (74.26%), Postives = 237/272 (87.13%), Query Frame = 1 

Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MS+  K +SI IREVWN N+E E AL+RE+VD F ++AMDTEFPG+V RPVG FK   +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFREFNISNDIFASDSIE 120
           +Y+TLK NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF++ +DI+A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSL 180
           LLRQ GIDF KNNE GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P TQ  FF++I++YFP VYDIKHLMKFCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ 272
           +CTFRKL++ FF GS +KY+GVLYGLGVE GQ
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQ 272

[Close]
BLAST of Cp4.1LG07g03270 vs. Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 8.7e-121
Identity = 200/271 (73.80%), Postives = 233/271 (85.98%), Query Frame = 1 

Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MS+  K +SI IREVWN N++EE  L+R++VD F Y+AMDTEFPG+VVRPVG FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           +Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ +DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           L+Q GID  KN  +GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
            +Q  FF LIN+YFP VYDIKHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ 272
           CTFRKL++ FF G   KY+GVLYGLGVE GQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]
BLAST of Cp4.1LG07g03270 vs. Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 1.3e-119
Identity = 202/268 (75.37%), Postives = 232/268 (86.57%), Query Frame = 1 

Query: 6   KGESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTL 65
           K +SI IREVW++N+ EEFAL+REIVDKF+YIAMDTEFPGVV++PV  FK  ND NY+TL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIELLRQCG 125
           K+NVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFREFNI  DI+AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAA 185
           IDF+KN E+GIDV  FGEL+MSSGIVLND + WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 245
           FF L+ +YFP VYDIKHLM FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFNGSTQKYAGVLYGLGVETGQTT 274
           L++ +F GST+KY GVLYGLGVE G TT
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]
BLAST of Cp4.1LG07g03270 vs. Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 4.8e-95
Identity = 164/264 (62.12%), Postives = 204/264 (77.27%), Query Frame = 1 

Query: 8   ESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNIN------DYN 67
           ++I IREVWNHN+E+E AL+ + +D F Y+AMDTEFPG+V + V A  N N      +YN
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 68  YQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIELL 127
           Y TLK NV+ LKLIQLGLT SDE GNLPTCGT+K CIWQFNFREFN+ +D+FA DSIELL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPG 187
           R+  ID +KNNE G+D   F ELLM SG+VLND ++WVTFH GYDFGYLLKLL+ + LP 
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 TQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTAC 247
             + FFD +  +FP+VYDIK+LM FC + +GGL K+AELL V+R+G+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRDTFFNGSTQKYAGVLYGL 266
           TF K+++ FF GS  KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]
BLAST of Cp4.1LG07g03270 vs. Swiss-Prot
Match: CNOT8_MOUSE (CCR4-NOT transcription complex subunit 8 OS=Mus musculus GN=Cnot8 PE=2 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 2.8e-79
Identity = 145/265 (54.72%), Postives = 192/265 (72.45%), Query Frame = 1 

Query: 12  IREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDT 71
           I EVW  N+EEE   +REIV  ++YIAMDTEFPGVVVRP+G F++  DY YQ L+ NVD 
Sbjct: 12  ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71

Query: 72  LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIELLRQCGIDFQKN 131
           LK+IQLGLTF++E G  P+ G +    WQFNF+ FN++ D+++ DSI+LL   G+ FQK+
Sbjct: 72  LKIIQLGLTFTNEKGEYPS-GINT---WQFNFK-FNLTEDMYSQDSIDLLANSGLQFQKH 131

Query: 132 NEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLIN 191
            EEGID  HF ELLM+SG+VL DNV W++FHSGYDFGY++KLLT   LP  +  FF ++N
Sbjct: 132 EEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILN 191

Query: 192 MYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFF 251
           ++FP +YD+K+LMK C +  GGL ++A+ L+++RIG  HQAGSDSLLT   F ++++ FF
Sbjct: 192 LFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFRMKELFF 251

Query: 252 NGSTQ--KYAGVLYGLGVETGQTTN 275
             S    KY G LYGLG    Q  N
Sbjct: 252 EDSIDDAKYCGRLYGLGTGVAQKQN 271

[Close]
BLAST of Cp4.1LG07g03270 vs. TrEMBL
Match: A0A0A0LSM4_CUCSA (Ccr4-associated factor OS=Cucumis sativus GN=Csa_2G382590 PE=4 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 3.4e-148
Identity = 249/274 (90.88%), Postives = 268/274 (97.81%), Query Frame = 1 

Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MSILPKGESI+IREVWN N+EEEFAL+R+IVD+FNYIAMDTEFPGVVVRPVG+FKNIN+Y
Sbjct: 1   MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           NY+TL++NVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI +DI+ASDSIEL
Sbjct: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICDDIYASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           LR+CGIDFQK +EEGIDVN FGELLMSSGIVLNDN++WVTFHSGYDFGYLLKLLTCR+LP
Sbjct: 121 LRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
            TQA FFDLI+MYFPMVYDIKHLM+FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 275
           CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274

[Close]
BLAST of Cp4.1LG07g03270 vs. TrEMBL
Match: B9RNX3_RICCO (Ccr4-associated factor, putative OS=Ricinus communis GN=RCOM_0921770 PE=4 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 7.1e-146
Identity = 244/273 (89.38%), Postives = 259/273 (94.87%), Query Frame = 1 

Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MSI+PKG+SIHIREVWN N+EEEF L+REIVD+FNY+AMDTEFPGVV+RPVG FKNINDY
Sbjct: 1   MSIIPKGDSIHIREVWNDNLEEEFTLIREIVDQFNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           NYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIS DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDF+KNNE+GIDVN FGEL+MSSGIVLND V+WVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFKKNNEKGIDVNRFGELMMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
            TQA FFDLIN YFPMVYDIKHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DTQAGFFDLINTYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTT 274
           CTFRKLRD FFNGST+KYAGVLYGLGVE GQ T
Sbjct: 241 CTFRKLRDNFFNGSTEKYAGVLYGLGVENGQNT 273

[Close]
BLAST of Cp4.1LG07g03270 vs. TrEMBL
Match: W9QRX8_9ROSA (Putative CCR4-associated factor 1-7-like protein OS=Morus notabilis GN=L484_014468 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 2.7e-145
Identity = 248/276 (89.86%), Postives = 262/276 (94.93%), Query Frame = 1 

Query: 1   MSILPK--GESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNIN 60
           MSIL K  G+SI IREVWN N+EEEFAL+REIVDK+NY+AMDTEFPGVV+RPVG FKNIN
Sbjct: 1   MSILTKGDGDSIQIREVWNDNLEEEFALIREIVDKYNYVAMDTEFPGVVLRPVGNFKNIN 60

Query: 61  DYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSI 120
           DYNYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIS DIFASDSI
Sbjct: 61  DYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSI 120

Query: 121 ELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRS 180
           ELLRQCGIDF+KNNE+GIDVN FGELLMSSGIVLND V+WVTFHSGYDFGYLLKLLTC+S
Sbjct: 121 ELLRQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCQS 180

Query: 181 LPGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLL 240
           LP TQA FFDLIN+YFPMVYDIKHLMKFCNS HGGLNKLAELLEVER+GVCHQAGSDSLL
Sbjct: 181 LPDTQAGFFDLINVYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLL 240

Query: 241 TACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 275
           T+CTFRKLRDTFFNGST+KYAGVLYGLGVE GQTTN
Sbjct: 241 TSCTFRKLRDTFFNGSTEKYAGVLYGLGVENGQTTN 276

[Close]
BLAST of Cp4.1LG07g03270 vs. TrEMBL
Match: A0A067KMK9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07101 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 1.3e-144
Identity = 245/275 (89.09%), Postives = 260/275 (94.55%), Query Frame = 1 

Query: 1   MSILPKGE-SIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNIND 60
           MSI+PK + SI IREVWN N+EEEFAL+REIVD+FNY+AMDTEFPGVV+RPVG FKNIND
Sbjct: 1   MSIIPKNDDSIQIREVWNDNLEEEFALIREIVDQFNYVAMDTEFPGVVLRPVGNFKNIND 60

Query: 61  YNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIE 120
           YNYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIS DIFASDSIE
Sbjct: 61  YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSL 180
           LLRQCGIDF+KNNE+GIDVN FGELLMSSG+VLND+VYWVTFHSGYDFGYLLKLLTCRSL
Sbjct: 121 LLRQCGIDFKKNNEKGIDVNRFGELLMSSGVVLNDSVYWVTFHSGYDFGYLLKLLTCRSL 180

Query: 181 PGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P TQA FFDLINMYFP+VYDIKHLMKFCNS HGGLNKLAELLEVER+GVCHQAGSDSLLT
Sbjct: 181 PDTQAGFFDLINMYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 275
           +CTFRKLRD FFNGS +KYAGVLYGLGVE GQ TN
Sbjct: 241 SCTFRKLRDNFFNGSAEKYAGVLYGLGVENGQNTN 275

[Close]
BLAST of Cp4.1LG07g03270 vs. TrEMBL
Match: A0A0D2RV14_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G061200 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 1.1e-143
Identity = 240/274 (87.59%), Postives = 259/274 (94.53%), Query Frame = 1 

Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MS+LPKG+S+HIREVWN N+EEEFAL+REIVD +NY+AMDTEFPGVV+RPVG+FKNI+DY
Sbjct: 1   MSVLPKGDSVHIREVWNDNLEEEFALIREIVDTYNYVAMDTEFPGVVLRPVGSFKNISDY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           NYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTD  CIWQFNF EFNIS DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSSCIWQFNFCEFNISEDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDF+KNNE+GIDV  FGELLMSSGIVLND V+WVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFKKNNEKGIDVKRFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
             QA FFDLINMYFPM+YDIKH+MKFCNS HGGLNKLAELLEVER+GVCHQAGSDSLLT+
Sbjct: 181 DNQAGFFDLINMYFPMLYDIKHMMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 275
           CTFRKLRD FFNGST+KYAGVLYGLGVE+GQTTN
Sbjct: 241 CTFRKLRDNFFNGSTEKYAGVLYGLGVESGQTTN 274

[Close]
BLAST of Cp4.1LG07g03270 vs. TAIR10
Match: AT2G32070.1 (AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 438.0 bits (1125), Expect = 4.4e-123
Identity = 202/272 (74.26%), Postives = 237/272 (87.13%), Query Frame = 1 

Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MS+  K +SI IREVWN N+E E AL+RE+VD F ++AMDTEFPG+V RPVG FK   +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFREFNISNDIFASDSIE 120
           +Y+TLK NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF++ +DI+A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSL 180
           LLRQ GIDF KNNE GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P TQ  FF++I++YFP VYDIKHLMKFCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ 272
           +CTFRKL++ FF GS +KY+GVLYGLGVE GQ
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQ 272

[Close]
BLAST of Cp4.1LG07g03270 vs. TAIR10
Match: AT5G10960.1 (AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 430.6 bits (1106), Expect = 7.0e-121
Identity = 202/268 (75.37%), Postives = 232/268 (86.57%), Query Frame = 1 

Query: 6   KGESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTL 65
           K +SI IREVW++N+ EEFAL+REIVDKF+YIAMDTEFPGVV++PV  FK  ND NY+TL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIELLRQCG 125
           K+NVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFREFNI  DI+AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAA 185
           IDF+KN E+GIDV  FGEL+MSSGIVLND + WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 245
           FF L+ +YFP VYDIKHLM FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFNGSTQKYAGVLYGLGVETGQTT 274
           L++ +F GST+KY GVLYGLGVE G TT
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]
BLAST of Cp4.1LG07g03270 vs. TAIR10
Match: AT1G80780.3 (AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 430.3 bits (1105), Expect = 9.2e-121
Identity = 198/268 (73.88%), Postives = 231/268 (86.19%), Query Frame = 1 

Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MS+  K +SI IREVWN N++EE  L+R++VD F Y+AMDTEFPG+VVRPVG FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           +Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ +DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           L+Q GID  KN  +GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
            +Q  FF LIN+YFP VYDIKHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVE 269
           CTFRKL++ FF G   KY+GVLYGLGVE
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVE 268

[Close]
BLAST of Cp4.1LG07g03270 vs. TAIR10
Match: AT1G15920.2 (AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 349.0 bits (894), Expect = 2.7e-96
Identity = 164/264 (62.12%), Postives = 204/264 (77.27%), Query Frame = 1 

Query: 8   ESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNIN------DYN 67
           ++I IREVWNHN+E+E AL+ + +D F Y+AMDTEFPG+V + V A  N N      +YN
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 68  YQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIELL 127
           Y TLK NV+ LKLIQLGLT SDE GNLPTCGT+K CIWQFNFREFN+ +D+FA DSIELL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPG 187
           R+  ID +KNNE G+D   F ELLM SG+VLND ++WVTFH GYDFGYLLKLL+ + LP 
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 TQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTAC 247
             + FFD +  +FP+VYDIK+LM FC + +GGL K+AELL V+R+G+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRDTFFNGSTQKYAGVLYGL 266
           TF K+++ FF GS  KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]
BLAST of Cp4.1LG07g03270 vs. TAIR10
Match: AT3G44260.1 (AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 280.0 bits (715), Expect = 1.5e-75
Identity = 143/269 (53.16%), Postives = 187/269 (69.52%), Query Frame = 1 

Query: 5   PKGESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNINDYNYQT 64
           P G ++  REVW  N+E EF L+ EI+D + +I+MDTEFPGV+ +    F N +D  Y  
Sbjct: 12  PDGVTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNPDDL-YTL 71

Query: 65  LKDNVDTLKLIQLGLTFSDENGNLPTCGTD--KFCIWQFNFREFNISNDIFASDSIELLR 124
           LK NVD L LIQ+GLT SD NGNLP  G D  +  IW+FNFR+F+++ D  A DSIELLR
Sbjct: 72  LKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLR 131

Query: 125 QCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGT 184
           + GIDF++N  +G++   F EL+MSSG+V N+ V WVTFHS YDFGYL+K+LT R LPG 
Sbjct: 132 RQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGA 191

Query: 185 QAAFFDLINMYF-PMVYDIKHLMKFC-NSFHGGLNKLAELLEVER-IGVCHQAGSDSLLT 244
              F  ++ + F   VYD+KH+MKFC     GGL+++A  LEV R +G CHQAGSDSLLT
Sbjct: 192 LGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLT 251

Query: 245 ACTFRKLRDTFF-NGSTQKYAGVLYGLGV 268
              F+++RD +F     +K+AGVLYGL V
Sbjct: 252 WHAFQRMRDLYFVQDGPEKHAGVLYGLEV 279

[Close]
BLAST of Cp4.1LG07g03270 vs. NCBI nr
Match: gi|449441872|ref|XP_004138706.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis sativus])

HSP 1 Score: 532.3 bits (1370), Expect = 4.9e-148
Identity = 249/274 (90.88%), Postives = 268/274 (97.81%), Query Frame = 1 

Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MSILPKGESI+IREVWN N+EEEFAL+R+IVD+FNYIAMDTEFPGVVVRPVG+FKNIN+Y
Sbjct: 1   MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           NY+TL++NVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI +DI+ASDSIEL
Sbjct: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICDDIYASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           LR+CGIDFQK +EEGIDVN FGELLMSSGIVLNDN++WVTFHSGYDFGYLLKLLTCR+LP
Sbjct: 121 LRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
            TQA FFDLI+MYFPMVYDIKHLM+FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 275
           CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274

[Close]
BLAST of Cp4.1LG07g03270 vs. NCBI nr
Match: gi|659088970|ref|XP_008445257.1| (PREDICTED: LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 7 [Cucumis melo])

HSP 1 Score: 528.5 bits (1360), Expect = 7.0e-147
Identity = 248/274 (90.51%), Postives = 266/274 (97.08%), Query Frame = 1 

Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MSILPKGESI+IREVWN N+EEEFAL+R+IVD+FNYIAMDTEFPGVVVRPVG+FKNIN+Y
Sbjct: 1   MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           NY+TL++NVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI +DI+ASDSIEL
Sbjct: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICDDIYASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           LR+CGIDFQK +EEGIDVN FGELLMSSGIVLNDN+ WVTFHSGYDFGYLLKLLTCR+LP
Sbjct: 121 LRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIXWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
            TQA FFDLI+MYFPMVYDIKHLM+FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 275
           CTFRKLRDTFFNGS QKYAGVLYGLGVETGQTTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVETGQTTN 274

[Close]
BLAST of Cp4.1LG07g03270 vs. NCBI nr
Match: gi|1000974262|ref|XP_015572459.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Ricinus communis])

HSP 1 Score: 524.6 bits (1350), Expect = 1.0e-145
Identity = 244/273 (89.38%), Postives = 259/273 (94.87%), Query Frame = 1 

Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MSI+PKG+SIHIREVWN N+EEEF L+REIVD+FNY+AMDTEFPGVV+RPVG FKNINDY
Sbjct: 1   MSIIPKGDSIHIREVWNDNLEEEFTLIREIVDQFNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           NYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIS DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDF+KNNE+GIDVN FGEL+MSSGIVLND V+WVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFKKNNEKGIDVNRFGELMMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
            TQA FFDLIN YFPMVYDIKHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DTQAGFFDLINTYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTT 274
           CTFRKLRD FFNGST+KYAGVLYGLGVE GQ T
Sbjct: 241 CTFRKLRDNFFNGSTEKYAGVLYGLGVENGQNT 273

[Close]
BLAST of Cp4.1LG07g03270 vs. NCBI nr
Match: gi|703074973|ref|XP_010089956.1| (putative CCR4-associated factor 1-7-like protein [Morus notabilis])

HSP 1 Score: 522.7 bits (1345), Expect = 3.9e-145
Identity = 248/276 (89.86%), Postives = 262/276 (94.93%), Query Frame = 1 

Query: 1   MSILPK--GESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNIN 60
           MSIL K  G+SI IREVWN N+EEEFAL+REIVDK+NY+AMDTEFPGVV+RPVG FKNIN
Sbjct: 1   MSILTKGDGDSIQIREVWNDNLEEEFALIREIVDKYNYVAMDTEFPGVVLRPVGNFKNIN 60

Query: 61  DYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSI 120
           DYNYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIS DIFASDSI
Sbjct: 61  DYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSI 120

Query: 121 ELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRS 180
           ELLRQCGIDF+KNNE+GIDVN FGELLMSSGIVLND V+WVTFHSGYDFGYLLKLLTC+S
Sbjct: 121 ELLRQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCQS 180

Query: 181 LPGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLL 240
           LP TQA FFDLIN+YFPMVYDIKHLMKFCNS HGGLNKLAELLEVER+GVCHQAGSDSLL
Sbjct: 181 LPDTQAGFFDLINVYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLL 240

Query: 241 TACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 275
           T+CTFRKLRDTFFNGST+KYAGVLYGLGVE GQTTN
Sbjct: 241 TSCTFRKLRDTFFNGSTEKYAGVLYGLGVENGQTTN 276

[Close]
BLAST of Cp4.1LG07g03270 vs. NCBI nr
Match: gi|802626869|ref|XP_012076450.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Jatropha curcas])

HSP 1 Score: 520.4 bits (1339), Expect = 1.9e-144
Identity = 245/275 (89.09%), Postives = 260/275 (94.55%), Query Frame = 1 

Query: 1   MSILPKGE-SIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNIND 60
           MSI+PK + SI IREVWN N+EEEFAL+REIVD+FNY+AMDTEFPGVV+RPVG FKNIND
Sbjct: 1   MSIIPKNDDSIQIREVWNDNLEEEFALIREIVDQFNYVAMDTEFPGVVLRPVGNFKNIND 60

Query: 61  YNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIE 120
           YNYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIS DIFASDSIE
Sbjct: 61  YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSL 180
           LLRQCGIDF+KNNE+GIDVN FGELLMSSG+VLND+VYWVTFHSGYDFGYLLKLLTCRSL
Sbjct: 121 LLRQCGIDFKKNNEKGIDVNRFGELLMSSGVVLNDSVYWVTFHSGYDFGYLLKLLTCRSL 180

Query: 181 PGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P TQA FFDLINMYFP+VYDIKHLMKFCNS HGGLNKLAELLEVER+GVCHQAGSDSLLT
Sbjct: 181 PDTQAGFFDLINMYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 275
           +CTFRKLRD FFNGS +KYAGVLYGLGVE GQ TN
Sbjct: 241 SCTFRKLRDNFFNGSAEKYAGVLYGLGVENGQNTN 275

The following BLAST results are available for this feature:
BLAST of Cp4.1LG07g03270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CAF1G_ARATH7.8e-12274.26Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE... [more]
CAF1F_ARATH8.7e-12173.80Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE... [more]
CAF1J_ARATH1.3e-11975.37Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 ... [more]
CAF1B_ARATH4.8e-9562.12Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE... [more]
CNOT8_MOUSE2.8e-7954.72CCR4-NOT transcription complex subunit 8 OS=Mus musculus GN=Cnot8 PE=2 SV=1[more]
BLAST of Cp4.1LG07g03270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSM4_CUCSA3.4e-14890.88Ccr4-associated factor OS=Cucumis sativus GN=Csa_2G382590 PE=4 SV=1[more]
B9RNX3_RICCO7.1e-14689.38Ccr4-associated factor, putative OS=Ricinus communis GN=RCOM_0921770 PE=4 SV=1[more]
W9QRX8_9ROSA2.7e-14589.86Putative CCR4-associated factor 1-7-like protein OS=Morus notabilis GN=L484_0144... [more]
A0A067KMK9_JATCU1.3e-14489.09Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07101 PE=4 SV=1[more]
A0A0D2RV14_GOSRA1.1e-14387.59Uncharacterized protein OS=Gossypium raimondii GN=B456_009G061200 PE=4 SV=1[more]
BLAST of Cp4.1LG07g03270 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G32070.14.4e-12374.26 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT5G10960.17.0e-12175.37 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G80780.39.2e-12173.88 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G15920.22.7e-9662.12 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT3G44260.11.5e-7553.16 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
BLAST of Cp4.1LG07g03270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449441872|ref|XP_004138706.1|4.9e-14890.88PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis sativus][more]
gi|659088970|ref|XP_008445257.1|7.0e-14790.51PREDICTED: LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 7 [Cuc... [more]
gi|1000974262|ref|XP_015572459.1|1.0e-14589.38PREDICTED: probable CCR4-associated factor 1 homolog 7 [Ricinus communis][more]
gi|703074973|ref|XP_010089956.1|3.9e-14589.86putative CCR4-associated factor 1-7-like protein [Morus notabilis][more]
gi|802626869|ref|XP_012076450.1|1.9e-14489.09PREDICTED: probable CCR4-associated factor 1 homolog 7 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR006941RNase_CAF1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0008150 biological_process
biological_process GO:0017148 negative regulation of translation
biological_process GO:0043928 exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0007033 vacuole organization
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0007030 Golgi organization
biological_process GO:0000902 cell morphogenesis
biological_process GO:0016049 cell growth
cellular_component GO:0030015 CCR4-NOT core complex
cellular_component GO:0000932 cytoplasmic mRNA processing body
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g03270.1Cp4.1LG07g03270.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 159..243
score: 1.5E-6coord: 15..136
score: 4.6
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 5..267
score: 3.3E
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 12..265
score: 1.46
NoneNo IPR availablePANTHERPTHR10797CCR4-NOT TRANSCRIPTION COMPLEX SUBUNITcoord: 1..274
score: 7.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG07g03270Cucsa.162770Cucumber (Gy14) v1cgycpeB0444
Cp4.1LG07g03270CmaCh12G003600Cucurbita maxima (Rimu)cmacpeB203
Cp4.1LG07g03270CmaCh05G003560Cucurbita maxima (Rimu)cmacpeB797
Cp4.1LG07g03270CmoCh05G003590Cucurbita moschata (Rifu)cmocpeB750
Cp4.1LG07g03270CmoCh12G003130Cucurbita moschata (Rifu)cmocpeB174
Cp4.1LG07g03270Cla022358Watermelon (97103) v1cpewmB782
Cp4.1LG07g03270Csa2G382590Cucumber (Chinese Long) v2cpecuB810
Cp4.1LG07g03270MELO3C011292Melon (DHL92) v3.5.1cpemeB761
Cp4.1LG07g03270ClCG08G013650Watermelon (Charleston Gray)cpewcgB748
Cp4.1LG07g03270CSPI02G23860Wild cucumber (PI 183967)cpecpiB811
Cp4.1LG07g03270Lsi08G012400Bottle gourd (USVL1VR-Ls)cpelsiB685
Cp4.1LG07g03270MELO3C011292.2Melon (DHL92) v3.6.1cpemedB897
Cp4.1LG07g03270CsaV3_2G032410Cucumber (Chinese Long) v3cpecucB1004
Cp4.1LG07g03270Bhi04G000032Wax gourdcpewgoB1029
Cp4.1LG07g03270CsGy2G023610Cucumber (Gy14) v2cgybcpeB260
Cp4.1LG07g03270Carg03951Silver-seed gourdcarcpeB1368
Cp4.1LG07g03270Carg09359Silver-seed gourdcarcpeB0205
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG07g03270Cp4.1LG11g02960Cucurbita pepo (Zucchini)cpecpeB146
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG07g03270Cucurbita pepo (Zucchini)cpecpeB191
Cp4.1LG07g03270Cucurbita pepo (Zucchini)cpecpeB513
Cp4.1LG07g03270Cucumber (Gy14) v1cgycpeB0713
Cp4.1LG07g03270Cucurbita maxima (Rimu)cmacpeB068
Cp4.1LG07g03270Cucurbita moschata (Rifu)cmocpeB041
Cp4.1LG07g03270Wild cucumber (PI 183967)cpecpiB834
Cp4.1LG07g03270Cucumber (Chinese Long) v2cpecuB833
Cp4.1LG07g03270Bottle gourd (USVL1VR-Ls)cpelsiB677
Cp4.1LG07g03270Watermelon (Charleston Gray)cpewcgB742
Cp4.1LG07g03270Watermelon (97103) v1cpewmB800
Cp4.1LG07g03270Melon (DHL92) v3.5.1cpemeB783
Cp4.1LG07g03270Cucumber (Gy14) v2cgybcpeB574
Cp4.1LG07g03270Melon (DHL92) v3.6.1cpemedB919
Cp4.1LG07g03270Silver-seed gourdcarcpeB0292
Cp4.1LG07g03270Silver-seed gourdcarcpeB0908
Cp4.1LG07g03270Cucumber (Chinese Long) v3cpecucB1026
Cp4.1LG07g03270Wax gourdcpewgoB1060