Cp4.1LG07g03260 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG07g03260
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCCR4-NOT transcription complex subunit 7
LocationCp4.1LG07 : 2052553 .. 2053365 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGATTTTACCCAAAGGCGATTCGATTCAAATCCGTGAGGTCTGGGACGCCAATTTAGAAGAGGAGTTTGCGCTTATCCGTGAAATTGTTGATGAGTTTAATTACATAGCCATGGATACTGAGTTCCCCGGCGTTGTGCTTCGACCGCTTGGTGCTTTCAAGAATATCAACGACTACAACTACCAAACTCTCAAGAGTAATGTTGATACTTTGAAGTTGATTCAATTGGGTCTTACGTTTTCTGATGAGAATGGAAATCTTCCAACTTGTGGAACGGATAAGTTTTGCATTTGGCAGTTCAATTTCCGTGAGTTCAATACTATTAATGATATTTTTGCTAGTGATTCCATTGAACTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAACGAAGAGGGTATCGATGTTAATCGATTTGGTGAGCTTCTAATGTCTTCTGGGGTTGTGTTGAACAATGATGTTATCTGGGTTACGTTCCACAGTGGGTATGATTTTGGTTACTTGCTGAAATTGCTGACTTGCCGAGCCTTACCCGAAACGCAGGCCGGGTTTTTTGAGCTCATCAAGATCTATTTTCCAGTGCTCTATGATATCAAGCATTTGATGAAGTTCTGCAACAGTCTCCATGGTGGGTTGAACAAACTTGCAGAATTACTAGAAGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTCACTGCTTGTACTTTTAGGAAGTTGAGGGGCACCTTTTTCAATGGTTCTACGCAGAAATACGCAGGTGTTTTATACGGTCTCGGTGTCGAAGATGAATAG

mRNA sequence

ATGTCGATTTTACCCAAAGGCGATTCGATTCAAATCCGTGAGGTCTGGGACGCCAATTTAGAAGAGGAGTTTGCGCTTATCCGTGAAATTGTTGATGAGTTTAATTACATAGCCATGGATACTGAGTTCCCCGGCGTTGTGCTTCGACCGCTTGGTGCTTTCAAGAATATCAACGACTACAACTACCAAACTCTCAAGAGTAATGTTGATACTTTGAAGTTGATTCAATTGGGTCTTACGTTTTCTGATGAGAATGGAAATCTTCCAACTTGTGGAACGGATAAGTTTTGCATTTGGCAGTTCAATTTCCGTGAGTTCAATACTATTAATGATATTTTTGCTAGTGATTCCATTGAACTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAACGAAGAGGGTATCGATGTTAATCGATTTGGTGAGCTTCTAATGTCTTCTGGGGTTGTGTTGAACAATGATGTTATCTGGGTTACGTTCCACAGTGGGTATGATTTTGGTTACTTGCTGAAATTGCTGACTTGCCGAGCCTTACCCGAAACGCAGGCCGGGTTTTTTGAGCTCATCAAGATCTATTTTCCAGTGCTCTATGATATCAAGCATTTGATGAAGTTCTGCAACAGTCTCCATGGTGGGTTGAACAAACTTGCAGAATTACTAGAAGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTCACTGCTTGTACTTTTAGGAAGTTGAGGGGCACCTTTTTCAATGGTTCTACGCAGAAATACGCAGGTGTTTTATACGGTCTCGGTGTCGAAGATGAATAG

Coding sequence (CDS)

ATGTCGATTTTACCCAAAGGCGATTCGATTCAAATCCGTGAGGTCTGGGACGCCAATTTAGAAGAGGAGTTTGCGCTTATCCGTGAAATTGTTGATGAGTTTAATTACATAGCCATGGATACTGAGTTCCCCGGCGTTGTGCTTCGACCGCTTGGTGCTTTCAAGAATATCAACGACTACAACTACCAAACTCTCAAGAGTAATGTTGATACTTTGAAGTTGATTCAATTGGGTCTTACGTTTTCTGATGAGAATGGAAATCTTCCAACTTGTGGAACGGATAAGTTTTGCATTTGGCAGTTCAATTTCCGTGAGTTCAATACTATTAATGATATTTTTGCTAGTGATTCCATTGAACTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAACGAAGAGGGTATCGATGTTAATCGATTTGGTGAGCTTCTAATGTCTTCTGGGGTTGTGTTGAACAATGATGTTATCTGGGTTACGTTCCACAGTGGGTATGATTTTGGTTACTTGCTGAAATTGCTGACTTGCCGAGCCTTACCCGAAACGCAGGCCGGGTTTTTTGAGCTCATCAAGATCTATTTTCCAGTGCTCTATGATATCAAGCATTTGATGAAGTTCTGCAACAGTCTCCATGGTGGGTTGAACAAACTTGCAGAATTACTAGAAGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTCACTGCTTGTACTTTTAGGAAGTTGAGGGGCACCTTTTTCAATGGTTCTACGCAGAAATACGCAGGTGTTTTATACGGTCTCGGTGTCGAAGATGAATAG

Protein sequence

MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVEDE
Homology
[Close]
BLAST of Cp4.1LG07g03260 vs. Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 437.2 bits (1123), Expect = 1.3e-121
Identity = 204/270 (75.56%), Postives = 237/270 (87.78%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MS+  K DSIQIREVW+ NLE E ALIRE+VD+F ++AMDTEFPG+V RP+G FK   +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFREFNTINDIFASDSIE 120
           +Y+TLK+NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF+  +DI+A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRAL 180
           LLRQ GIDF KNNE GID  RF ELLMSSG+VLN +V WVTFHSGYDFGYLLKLLTC+ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           PETQ GFFE+I +YFP +YDIKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRGTFFNGSTQKYAGVLYGLGVED 270
           +CTFRKL+  FF GS +KY+GVLYGLGVE+
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVEN 270

[Close]
BLAST of Cp4.1LG07g03260 vs. Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 3.6e-119
Identity = 201/264 (76.14%), Postives = 229/264 (86.74%), Query Frame = 1 

Query: 6   KGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTL 65
           K DSI IREVWD NL EEFALIREIVD+F+YIAMDTEFPGVVL+P+  FK  ND NY+TL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIELLRQCG 125
           K NVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFREFN   DI+AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAG 185
           IDF+KN E+GIDV RFGEL+MSSG+VLN+ + WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 245
           FF+L+ +YFP +YDIKHLM FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRGTFFNGSTQKYAGVLYGLGVED 270
           L+  +F GST+KY GVLYGLGVED
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVED 269

[Close]
BLAST of Cp4.1LG07g03260 vs. Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 8.0e-119
Identity = 197/269 (73.23%), Postives = 233/269 (86.62%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MS+  K DSIQIREVW+ NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           +Y+TLK+NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF+  +DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN +V WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ++Q  FF+LI +YFP +YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRGTFFNGSTQKYAGVLYGLGVED 270
           CTFRKL+  FF G   KY+GVLYGLGVE+
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVEN 269

[Close]
BLAST of Cp4.1LG07g03260 vs. Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 2.1e-95
Identity = 167/264 (63.26%), Postives = 208/264 (78.79%), Query Frame = 1 

Query: 8   DSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIN------DYN 67
           D+I+IREVW+ NLE+E ALI + +D+F Y+AMDTEFPG+V + + A  N N      +YN
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 68  YQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIELL 127
           Y TLK+NV+ LKLIQLGLT SDE GNLPTCGT+K CIWQFNFREFN I+D+FA DSIELL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPE 187
           R+  ID +KNNE G+D  RF ELLM SGVVLN+ + WVTFH GYDFGYLLKLL+ + LPE
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 TQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTAC 247
             + FF+ ++ +FPV+YDIK+LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRGTFFNGSTQKYAGVLYGL 266
           TF K++  FF GS  KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]
BLAST of Cp4.1LG07g03260 vs. Swiss-Prot
Match: CNOT7_MOUSE (CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7 PE=1 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 2.8e-79
Identity = 148/260 (56.92%), Postives = 187/260 (71.92%), Query Frame = 1 

Query: 9   SIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSN 68
           S +I EVW  NL+EE   IR+++ ++NY+AMDTEFPGVV RP+G F++  DY YQ L+ N
Sbjct: 9   SQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCN 68

Query: 69  VDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIELLRQCGIDF 128
           VD LK+IQLGLTF +E G  P  GT     WQFNF+ FN   D++A DSIELL   GI F
Sbjct: 69  VDLLKIIQLGLTFMNEQGEYPP-GTST---WQFNFK-FNLTEDMYAQDSIELLTTSGIQF 128

Query: 129 QKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFE 188
           +K+ EEGI+   F ELLM+SGVVL   V W++FHSGYDFGYL+K+LT   LPE +  FFE
Sbjct: 129 KKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFE 188

Query: 189 LIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRG 248
           +++++FPV+YD+K+LMK C +L GGL ++AE LE+ERIG  HQAGSDSLLT   F K+R 
Sbjct: 189 ILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMRE 248

Query: 249 TFFNG--STQKYAGVLYGLG 267
            FF       KY G LYGLG
Sbjct: 249 MFFEDHIDDAKYCGHLYGLG 263

[Close]
BLAST of Cp4.1LG07g03260 vs. TrEMBL
Match: A0A0A0LMH2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382610 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 7.2e-143
Identity = 246/269 (91.45%), Postives = 256/269 (95.17%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVW+ANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NY+TLK NV+ LKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFN  +DIFASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN+DV WVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
             QAGFFELI +YFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRGTFFNGSTQKYAGVLYGLGVED 270
           CTFRKLR TFFNGS QKYAGVLYGLGVE+
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVEN 269

[Close]
BLAST of Cp4.1LG07g03260 vs. TrEMBL
Match: V4WB05_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008276mg PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 4.4e-140
Identity = 237/271 (87.45%), Postives = 258/271 (95.20%), Query Frame = 1 

Query: 1   MSILPKG-DSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIND 60
           MS+LPKG D IQIREVW+ NLEEEFALIREIVD++NYIAMDTEFPGVVLRP+GAFKNIND
Sbjct: 176 MSVLPKGGDEIQIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNIND 235

Query: 61  YNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIE 120
           YNYQTLK NVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFN I+DIFASDS+E
Sbjct: 236 YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVE 295

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRAL 180
           LL QCGIDF+KNNE+GIDVNRFGELLMSSG+VLN+ V WVTFHSGYDFGYLLKLLTCR+L
Sbjct: 296 LLHQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDVVRWVTFHSGYDFGYLLKLLTCRSL 355

Query: 181 PETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P+TQAGFFELI +YFPV+YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT
Sbjct: 356 PDTQAGFFELINMYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLT 415

Query: 241 ACTFRKLRGTFFNGSTQKYAGVLYGLGVEDE 271
           +CTFRKLR  FFNG T+KYAGVLYGLGVE++
Sbjct: 416 SCTFRKLRENFFNGCTEKYAGVLYGLGVEND 446

[Close]
BLAST of Cp4.1LG07g03260 vs. TrEMBL
Match: A0A067FVK4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023967mg PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 4.4e-140
Identity = 237/271 (87.45%), Postives = 258/271 (95.20%), Query Frame = 1 

Query: 1   MSILPKG-DSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIND 60
           MS+LPKG D IQIREVW+ NLEEEFALIREIVD++NYIAMDTEFPGVVLRP+GAFKNIND
Sbjct: 1   MSVLPKGGDEIQIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNIND 60

Query: 61  YNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIE 120
           YNYQTLK NVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFN I+DIFASDS+E
Sbjct: 61  YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRAL 180
           LL QCGIDF+KNNE+GIDVNRFGELLMSSG+VLN+ V WVTFHSGYDFGYLLKLLTCR+L
Sbjct: 121 LLHQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDVVRWVTFHSGYDFGYLLKLLTCRSL 180

Query: 181 PETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P+TQAGFFELI +YFPV+YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT
Sbjct: 181 PDTQAGFFELINMYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRGTFFNGSTQKYAGVLYGLGVEDE 271
           +CTFRKLR  FFNG T+KYAGVLYGLGVE++
Sbjct: 241 SCTFRKLRENFFNGCTEKYAGVLYGLGVEND 271

[Close]
BLAST of Cp4.1LG07g03260 vs. TrEMBL
Match: B9RNX3_RICCO (Ccr4-associated factor, putative OS=Ricinus communis GN=RCOM_0921770 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 9.8e-140
Identity = 234/269 (86.99%), Postives = 254/269 (94.42%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSI+PKGDSI IREVW+ NLEEEF LIREIVD+FNY+AMDTEFPGVVLRP+G FKNINDY
Sbjct: 1   MSIIPKGDSIHIREVWNDNLEEEFTLIREIVDQFNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NYQTLK NVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFN   DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDF+KNNE+GIDVNRFGEL+MSSG+VLN+ V WVTFHSGYDFGYLLKLLTCR+LP
Sbjct: 121 LRQCGIDFKKNNEKGIDVNRFGELMMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           +TQAGFF+LI  YFP++YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DTQAGFFDLINTYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRGTFFNGSTQKYAGVLYGLGVED 270
           CTFRKLR  FFNGST+KYAGVLYGLGVE+
Sbjct: 241 CTFRKLRDNFFNGSTEKYAGVLYGLGVEN 269

[Close]
BLAST of Cp4.1LG07g03260 vs. TrEMBL
Match: A0A067KMK9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07101 PE=4 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 1.7e-139
Identity = 238/270 (88.15%), Postives = 255/270 (94.44%), Query Frame = 1 

Query: 1   MSILPKGD-SIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIND 60
           MSI+PK D SIQIREVW+ NLEEEFALIREIVD+FNY+AMDTEFPGVVLRP+G FKNIND
Sbjct: 1   MSIIPKNDDSIQIREVWNDNLEEEFALIREIVDQFNYVAMDTEFPGVVLRPVGNFKNIND 60

Query: 61  YNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIE 120
           YNYQTLK NVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFN   DIFASDSIE
Sbjct: 61  YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRAL 180
           LLRQCGIDF+KNNE+GIDVNRFGELLMSSGVVLN+ V WVTFHSGYDFGYLLKLLTCR+L
Sbjct: 121 LLRQCGIDFKKNNEKGIDVNRFGELLMSSGVVLNDSVYWVTFHSGYDFGYLLKLLTCRSL 180

Query: 181 PETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P+TQAGFF+LI +YFPV+YDIKHLMKFCNSLHGGLNKLAELLEVER+GVCHQAGSDSLLT
Sbjct: 181 PDTQAGFFDLINMYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLT 240

Query: 241 ACTFRKLRGTFFNGSTQKYAGVLYGLGVED 270
           +CTFRKLR  FFNGS +KYAGVLYGLGVE+
Sbjct: 241 SCTFRKLRDNFFNGSAEKYAGVLYGLGVEN 270

[Close]
BLAST of Cp4.1LG07g03260 vs. TAIR10
Match: AT2G32070.1 (AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 437.2 bits (1123), Expect = 7.4e-123
Identity = 204/270 (75.56%), Postives = 237/270 (87.78%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MS+  K DSIQIREVW+ NLE E ALIRE+VD+F ++AMDTEFPG+V RP+G FK   +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFREFNTINDIFASDSIE 120
           +Y+TLK+NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF+  +DI+A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRAL 180
           LLRQ GIDF KNNE GID  RF ELLMSSG+VLN +V WVTFHSGYDFGYLLKLLTC+ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           PETQ GFFE+I +YFP +YDIKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRGTFFNGSTQKYAGVLYGLGVED 270
           +CTFRKL+  FF GS +KY+GVLYGLGVE+
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVEN 270

[Close]
BLAST of Cp4.1LG07g03260 vs. TAIR10
Match: AT1G80780.3 (AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 430.3 bits (1105), Expect = 9.1e-121
Identity = 198/270 (73.33%), Postives = 234/270 (86.67%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MS+  K DSIQIREVW+ NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           +Y+TLK+NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF+  +DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN +V WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ++Q  FF+LI +YFP +YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRGTFFNGSTQKYAGVLYGLGVEDE 271
           CTFRKL+  FF G   KY+GVLYGLGVE+E
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENE 270

[Close]
BLAST of Cp4.1LG07g03260 vs. TAIR10
Match: AT5G10960.1 (AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 429.1 bits (1102), Expect = 2.0e-120
Identity = 201/264 (76.14%), Postives = 229/264 (86.74%), Query Frame = 1 

Query: 6   KGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTL 65
           K DSI IREVWD NL EEFALIREIVD+F+YIAMDTEFPGVVL+P+  FK  ND NY+TL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIELLRQCG 125
           K NVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFREFN   DI+AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAG 185
           IDF+KN E+GIDV RFGEL+MSSG+VLN+ + WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 245
           FF+L+ +YFP +YDIKHLM FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRGTFFNGSTQKYAGVLYGLGVED 270
           L+  +F GST+KY GVLYGLGVED
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVED 269

[Close]
BLAST of Cp4.1LG07g03260 vs. TAIR10
Match: AT1G15920.2 (AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-96
Identity = 167/264 (63.26%), Postives = 208/264 (78.79%), Query Frame = 1 

Query: 8   DSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIN------DYN 67
           D+I+IREVW+ NLE+E ALI + +D+F Y+AMDTEFPG+V + + A  N N      +YN
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 68  YQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIELL 127
           Y TLK+NV+ LKLIQLGLT SDE GNLPTCGT+K CIWQFNFREFN I+D+FA DSIELL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPE 187
           R+  ID +KNNE G+D  RF ELLM SGVVLN+ + WVTFH GYDFGYLLKLL+ + LPE
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 TQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTAC 247
             + FF+ ++ +FPV+YDIK+LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRGTFFNGSTQKYAGVLYGL 266
           TF K++  FF GS  KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]
BLAST of Cp4.1LG07g03260 vs. TAIR10
Match: AT3G44260.1 (AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 280.0 bits (715), Expect = 1.5e-75
Identity = 144/269 (53.53%), Postives = 188/269 (69.89%), Query Frame = 1 

Query: 5   PKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQT 64
           P G ++  REVW  NLE EF LI EI+D++ +I+MDTEFPGV+ +    F N +D  Y  
Sbjct: 12  PDGVTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNPDDL-YTL 71

Query: 65  LKSNVDTLKLIQLGLTFSDENGNLPTCGTD--KFCIWQFNFREFNTINDIFASDSIELLR 124
           LK+NVD L LIQ+GLT SD NGNLP  G D  +  IW+FNFR+F+   D  A DSIELLR
Sbjct: 72  LKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLR 131

Query: 125 QCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPET 184
           + GIDF++N  +G++  RF EL+MSSG+V N +V WVTFHS YDFGYL+K+LT R LP  
Sbjct: 132 RQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGA 191

Query: 185 QAGFFELIKIYF-PVLYDIKHLMKFC-NSLHGGLNKLAELLEVER-IGVCHQAGSDSLLT 244
              F  ++++ F   +YD+KH+MKFC   L GGL+++A  LEV R +G CHQAGSDSLLT
Sbjct: 192 LGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLT 251

Query: 245 ACTFRKLRGTFF-NGSTQKYAGVLYGLGV 268
              F+++R  +F     +K+AGVLYGL V
Sbjct: 252 WHAFQRMRDLYFVQDGPEKHAGVLYGLEV 279

[Close]
BLAST of Cp4.1LG07g03260 vs. NCBI nr
Match: gi|449441868|ref|XP_004138704.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis sativus])

HSP 1 Score: 514.6 bits (1324), Expect = 1.0e-142
Identity = 246/269 (91.45%), Postives = 256/269 (95.17%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVW+ANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NY+TLK NV+ LKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFN  +DIFASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN+DV WVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
             QAGFFELI +YFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRGTFFNGSTQKYAGVLYGLGVED 270
           CTFRKLR TFFNGS QKYAGVLYGLGVE+
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVEN 269

[Close]
BLAST of Cp4.1LG07g03260 vs. NCBI nr
Match: gi|659088972|ref|XP_008445259.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis melo])

HSP 1 Score: 513.5 bits (1321), Expect = 2.3e-142
Identity = 245/269 (91.08%), Postives = 256/269 (95.17%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVW+ANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NY+TLK NV+ LKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFN  +DIFASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN+DV WVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
             QAGFFELI +YFPV+YDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRGTFFNGSTQKYAGVLYGLGVED 270
           CTFRKLR TFFNGS QKYAGVLYGLGVE+
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVEN 269

[Close]
BLAST of Cp4.1LG07g03260 vs. NCBI nr
Match: gi|568859875|ref|XP_006483458.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Citrus sinensis])

HSP 1 Score: 505.4 bits (1300), Expect = 6.3e-140
Identity = 237/271 (87.45%), Postives = 258/271 (95.20%), Query Frame = 1 

Query: 1   MSILPKG-DSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIND 60
           MS+LPKG D IQIREVW+ NLEEEFALIREIVD++NYIAMDTEFPGVVLRP+GAFKNIND
Sbjct: 1   MSVLPKGGDEIQIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNIND 60

Query: 61  YNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIE 120
           YNYQTLK NVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFN I+DIFASDS+E
Sbjct: 61  YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRAL 180
           LL QCGIDF+KNNE+GIDVNRFGELLMSSG+VLN+ V WVTFHSGYDFGYLLKLLTCR+L
Sbjct: 121 LLHQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDVVRWVTFHSGYDFGYLLKLLTCRSL 180

Query: 181 PETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P+TQAGFFELI +YFPV+YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT
Sbjct: 181 PDTQAGFFELINMYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRGTFFNGSTQKYAGVLYGLGVEDE 271
           +CTFRKLR  FFNG T+KYAGVLYGLGVE++
Sbjct: 241 SCTFRKLRENFFNGCTEKYAGVLYGLGVEND 271

[Close]
BLAST of Cp4.1LG07g03260 vs. NCBI nr
Match: gi|1012258024|ref|XP_015945361.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Arachis duranensis])

HSP 1 Score: 505.4 bits (1300), Expect = 6.3e-140
Identity = 236/269 (87.73%), Postives = 257/269 (95.54%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDS+QIREVW+ NLEEEFALIREIVDE+NY+AMDTEFPGVVLRP+G FKNINDY
Sbjct: 1   MSILPKGDSVQIREVWNDNLEEEFALIREIVDEYNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NYQTLK NVD LKLIQLGLTFSDE+GNLPTCGT+  CIWQFNFREFN   DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDEHGNLPTCGTESSCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDF+KNNE+GIDVNRFGELLMSSG+VLN+ V WVTFHSGYDFGYLLKLLTCR+LP
Sbjct: 121 LRQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDSVSWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           +TQAGFFELIK+YFP+LYDIKHLMKFCNSLHGGLNKLAELL+VER+GVCHQAGSDSLLT+
Sbjct: 181 DTQAGFFELIKMYFPMLYDIKHLMKFCNSLHGGLNKLAELLDVERVGVCHQAGSDSLLTS 240

Query: 241 CTFRKLRGTFFNGSTQKYAGVLYGLGVED 270
           CTFRKLR TFF+GST+KYAGVLYGLGVE+
Sbjct: 241 CTFRKLRDTFFSGSTEKYAGVLYGLGVEN 269

[Close]
BLAST of Cp4.1LG07g03260 vs. NCBI nr
Match: gi|567916596|ref|XP_006450304.1| (hypothetical protein CICLE_v10008276mg [Citrus clementina])

HSP 1 Score: 505.4 bits (1300), Expect = 6.3e-140
Identity = 237/271 (87.45%), Postives = 258/271 (95.20%), Query Frame = 1 

Query: 1   MSILPKG-DSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIND 60
           MS+LPKG D IQIREVW+ NLEEEFALIREIVD++NYIAMDTEFPGVVLRP+GAFKNIND
Sbjct: 176 MSVLPKGGDEIQIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNIND 235

Query: 61  YNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIE 120
           YNYQTLK NVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFN I+DIFASDS+E
Sbjct: 236 YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVE 295

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRAL 180
           LL QCGIDF+KNNE+GIDVNRFGELLMSSG+VLN+ V WVTFHSGYDFGYLLKLLTCR+L
Sbjct: 296 LLHQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDVVRWVTFHSGYDFGYLLKLLTCRSL 355

Query: 181 PETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P+TQAGFFELI +YFPV+YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT
Sbjct: 356 PDTQAGFFELINMYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLT 415

Query: 241 ACTFRKLRGTFFNGSTQKYAGVLYGLGVEDE 271
           +CTFRKLR  FFNG T+KYAGVLYGLGVE++
Sbjct: 416 SCTFRKLRENFFNGCTEKYAGVLYGLGVEND 446

The following BLAST results are available for this feature:
BLAST of Cp4.1LG07g03260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CAF1G_ARATH1.3e-12175.56Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE... [more]
CAF1J_ARATH3.6e-11976.14Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 ... [more]
CAF1F_ARATH8.0e-11973.23Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE... [more]
CAF1B_ARATH2.1e-9563.26Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE... [more]
CNOT7_MOUSE2.8e-7956.92CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7 PE=1 SV=1[more]
BLAST of Cp4.1LG07g03260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMH2_CUCSA7.2e-14391.45Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382610 PE=4 SV=1[more]
V4WB05_9ROSI4.4e-14087.45Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008276mg PE=4 SV=1[more]
A0A067FVK4_CITSI4.4e-14087.45Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023967mg PE=4 SV=1[more]
B9RNX3_RICCO9.8e-14086.99Ccr4-associated factor, putative OS=Ricinus communis GN=RCOM_0921770 PE=4 SV=1[more]
A0A067KMK9_JATCU1.7e-13988.15Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07101 PE=4 SV=1[more]
BLAST of Cp4.1LG07g03260 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G32070.17.4e-12375.56 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G80780.39.1e-12173.33 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT5G10960.12.0e-12076.14 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G15920.21.2e-9663.26 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT3G44260.11.5e-7553.53 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
BLAST of Cp4.1LG07g03260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449441868|ref|XP_004138704.1|1.0e-14291.45PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis sativus][more]
gi|659088972|ref|XP_008445259.1|2.3e-14291.08PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis melo][more]
gi|568859875|ref|XP_006483458.1|6.3e-14087.45PREDICTED: probable CCR4-associated factor 1 homolog 7 [Citrus sinensis][more]
gi|1012258024|ref|XP_015945361.1|6.3e-14087.73PREDICTED: probable CCR4-associated factor 1 homolog 7 [Arachis duranensis][more]
gi|567916596|ref|XP_006450304.1|6.3e-14087.45hypothetical protein CICLE_v10008276mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR006941RNase_CAF1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component GO:0005634 nucleus
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g03260.1Cp4.1LG07g03260.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 157..243
score: 7.0E-7coord: 15..136
score: 1.9
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 5..267
score: 9.8E
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 12..265
score: 4.62
NoneNo IPR availablePANTHERPTHR10797CCR4-NOT TRANSCRIPTION COMPLEX SUBUNITcoord: 1..269
score: 2.0E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG07g03260Cucumber (Chinese Long) v3cpecucB1004
Cp4.1LG07g03260Cucumber (Chinese Long) v3cpecucB1026
Cp4.1LG07g03260Wax gourdcpewgoB1029
Cp4.1LG07g03260Wax gourdcpewgoB1060
Cp4.1LG07g03260Cucurbita pepo (Zucchini)cpecpeB146
Cp4.1LG07g03260Cucurbita pepo (Zucchini)cpecpeB191
Cp4.1LG07g03260Cucurbita pepo (Zucchini)cpecpeB513
Cp4.1LG07g03260Cucumber (Gy14) v1cgycpeB0444
Cp4.1LG07g03260Cucumber (Gy14) v1cgycpeB0713
Cp4.1LG07g03260Cucurbita maxima (Rimu)cmacpeB068
Cp4.1LG07g03260Cucurbita maxima (Rimu)cmacpeB203
Cp4.1LG07g03260Cucurbita maxima (Rimu)cmacpeB797
Cp4.1LG07g03260Cucurbita moschata (Rifu)cmocpeB041
Cp4.1LG07g03260Cucurbita moschata (Rifu)cmocpeB174
Cp4.1LG07g03260Cucurbita moschata (Rifu)cmocpeB750
Cp4.1LG07g03260Wild cucumber (PI 183967)cpecpiB811
Cp4.1LG07g03260Wild cucumber (PI 183967)cpecpiB834
Cp4.1LG07g03260Cucumber (Chinese Long) v2cpecuB810
Cp4.1LG07g03260Cucumber (Chinese Long) v2cpecuB833
Cp4.1LG07g03260Bottle gourd (USVL1VR-Ls)cpelsiB677
Cp4.1LG07g03260Bottle gourd (USVL1VR-Ls)cpelsiB685
Cp4.1LG07g03260Watermelon (Charleston Gray)cpewcgB748
Cp4.1LG07g03260Watermelon (Charleston Gray)cpewcgB742
Cp4.1LG07g03260Watermelon (97103) v1cpewmB782
Cp4.1LG07g03260Watermelon (97103) v1cpewmB800
Cp4.1LG07g03260Melon (DHL92) v3.5.1cpemeB761
Cp4.1LG07g03260Melon (DHL92) v3.5.1cpemeB783
Cp4.1LG07g03260Cucumber (Gy14) v2cgybcpeB260
Cp4.1LG07g03260Cucumber (Gy14) v2cgybcpeB574
Cp4.1LG07g03260Melon (DHL92) v3.6.1cpemedB897
Cp4.1LG07g03260Melon (DHL92) v3.6.1cpemedB919
Cp4.1LG07g03260Silver-seed gourdcarcpeB0205
Cp4.1LG07g03260Silver-seed gourdcarcpeB0292
Cp4.1LG07g03260Silver-seed gourdcarcpeB0908
Cp4.1LG07g03260Silver-seed gourdcarcpeB1368