Cp4.1LG04g03090 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGTTCCTCTCGGACCCGGCAAGTTCTACGGCAGCAGTCTCCCCCGTCCCCGCTACTACACCGACGTCAAGTTCAACGATGAGCGTGTCGATCCACCCACGCCGGTCCTCGATCCGCTTCTCTCATGGGCGAACGAGGCTCACTGGTCAATGGGAGGTCTCAGCTTCAATCGCCTGAGACTTCAGGGTCGAATCGAAGGCAATATCAACAAGCTTCGAACTGAGCGTGAGAAGATTGCTAAGAAGAAGAAAGTAGAGACGCCAGAGAGATCTGACTCAGATCTCAGAGACGATGCTGTTCGCCGGTCGAAGAAGTCGAAATCAGTATCACCACCGCCAGTGCCAATTGCAACTAAGAGACGGCGATTGATGCCATTGTTTGACGCTGAGGAGGATGATGTTGGTGAGCACAAGGAAGAAATTAGGGTTGTGAAGAGGAGATTGGTGAAGAAGCTGGGAGATGATTTCGATCGAGTCGCTGTGGAGGGGAAGAAGAACCAGTTGAAAGGTTCGAGGGATCGAAATTTGGAAGTCAATGGGATCGATGAATCTGTAATGAAGATTGTTGAGGAGATTAACGATCAAAGTACAAAGGGGAAGAGTAGTGGAAAAAAACTGGAAAATGATTCAATTTCTGCCACTAGAACTTCTCCCAGATTAGCTAATAAGCGTAGATCAAATTGA ATGGTTGTTCCTCTCGGACCCGGCAAGTTCTACGGCAGCAGTCTCCCCCGTCCCCGCTACTACACCGACGTCAAGTTCAACGATGAGCGTGTCGATCCACCCACGCCGGTCCTCGATCCGCTTCTCTCATGGGCGAACGAGGCTCACTGGTCAATGGGAGGTCTCAGCTTCAATCGCCTGAGACTTCAGGGTCGAATCGAAGGCAATATCAACAAGCTTCGAACTGAGCGTGAGAAGATTGCTAAGAAGAAGAAAGTAGAGACGCCAGAGAGATCTGACTCAGATCTCAGAGACGATGCTGTTCGCCGGTCGAAGAAGTCGAAATCAGTATCACCACCGCCAGTGCCAATTGCAACTAAGAGACGGCGATTGATGCCATTGTTTGACGCTGAGGAGGATGATGTTGGTGAGCACAAGGAAGAAATTAGGGTTGTGAAGAGGAGATTGGTGAAGAAGCTGGGAGATGATTTCGATCGAGTCGCTGTGGAGGGGAAGAAGAACCAGTTGAAAGGTTCGAGGGATCGAAATTTGGAAGTCAATGGGATCGATGAATCTGTAATGAAGATTGTTGAGGAGATTAACGATCAAAGTACAAAGGGGAAGAGTAGTGGAAAAAAACTGGAAAATGATTCAATTTCTGCCACTAGAACTTCTCCCAGATTAGCTAATAAGCGTAGATCAAATTGA ATGGTTGTTCCTCTCGGACCCGGCAAGTTCTACGGCAGCAGTCTCCCCCGTCCCCGCTACTACACCGACGTCAAGTTCAACGATGAGCGTGTCGATCCACCCACGCCGGTCCTCGATCCGCTTCTCTCATGGGCGAACGAGGCTCACTGGTCAATGGGAGGTCTCAGCTTCAATCGCCTGAGACTTCAGGGTCGAATCGAAGGCAATATCAACAAGCTTCGAACTGAGCGTGAGAAGATTGCTAAGAAGAAGAAAGTAGAGACGCCAGAGAGATCTGACTCAGATCTCAGAGACGATGCTGTTCGCCGGTCGAAGAAGTCGAAATCAGTATCACCACCGCCAGTGCCAATTGCAACTAAGAGACGGCGATTGATGCCATTGTTTGACGCTGAGGAGGATGATGTTGGTGAGCACAAGGAAGAAATTAGGGTTGTGAAGAGGAGATTGGTGAAGAAGCTGGGAGATGATTTCGATCGAGTCGCTGTGGAGGGGAAGAAGAACCAGTTGAAAGGTTCGAGGGATCGAAATTTGGAAGTCAATGGGATCGATGAATCTGTAATGAAGATTGTTGAGGAGATTAACGATCAAAGTACAAAGGGGAAGAGTAGTGGAAAAAAACTGGAAAATGATTCAATTTCTGCCACTAGAACTTCTCCCAGATTAGCTAATAAGCGTAGATCAAATTGA MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRLRLQGRIEGNINKLRTEREKIAKKKKVETPERSDSDLRDDAVRRSKKSKSVSPPPVPIATKRRRLMPLFDAEEDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRNLEVNGIDESVMKIVEEINDQSTKGKSSGKKLENDSISATRTSPRLANKRRSN
BLAST of Cp4.1LG04g03090 vs. TrEMBL
Match: A0A0A0K3S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 9.9e-85 Identity = 173/241 (71.78%), Postives = 204/241 (84.65%), Query Frame = 1
BLAST of Cp4.1LG04g03090 vs. TrEMBL
Match: W9R4I2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004788 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 5.1e-57 Identity = 141/251 (56.18%), Postives = 166/251 (66.14%), Query Frame = 1
BLAST of Cp4.1LG04g03090 vs. TrEMBL
Match: A0A061EAW7_THECC (Microtubule-associated protein 6, putative OS=Theobroma cacao GN=TCM_008115 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 1.8e-54 Identity = 131/246 (53.25%), Postives = 162/246 (65.85%), Query Frame = 1
BLAST of Cp4.1LG04g03090 vs. TrEMBL
Match: A0A0D2VYT4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G128300 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 1.9e-51 Identity = 129/240 (53.75%), Postives = 158/240 (65.83%), Query Frame = 1
BLAST of Cp4.1LG04g03090 vs. TrEMBL
Match: B9RVZ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174260 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.5e-51 Identity = 123/236 (52.12%), Postives = 156/236 (66.10%), Query Frame = 1
BLAST of Cp4.1LG04g03090 vs. TAIR10
Match: AT4G28310.1 (AT4G28310.1 unknown protein) HSP 1 Score: 162.2 bits (409), Expect = 3.9e-40 Identity = 100/226 (44.25%), Postives = 143/226 (63.27%), Query Frame = 1
BLAST of Cp4.1LG04g03090 vs. TAIR10
Match: AT1G52270.1 (AT1G52270.1 unknown protein) HSP 1 Score: 53.9 bits (128), Expect = 1.5e-07 Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 1
BLAST of Cp4.1LG04g03090 vs. NCBI nr
Match: gi|449438098|ref|XP_004136827.1| (PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus]) HSP 1 Score: 321.2 bits (822), Expect = 1.4e-84 Identity = 173/241 (71.78%), Postives = 204/241 (84.65%), Query Frame = 1
BLAST of Cp4.1LG04g03090 vs. NCBI nr
Match: gi|659110606|ref|XP_008455314.1| (PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo]) HSP 1 Score: 321.2 bits (822), Expect = 1.4e-84 Identity = 176/239 (73.64%), Postives = 200/239 (83.68%), Query Frame = 1
BLAST of Cp4.1LG04g03090 vs. NCBI nr
Match: gi|703073457|ref|XP_010089552.1| (hypothetical protein L484_004788 [Morus notabilis]) HSP 1 Score: 229.2 bits (583), Expect = 7.3e-57 Identity = 141/251 (56.18%), Postives = 166/251 (66.14%), Query Frame = 1
BLAST of Cp4.1LG04g03090 vs. NCBI nr
Match: gi|1009165334|ref|XP_015900977.1| (PREDICTED: uncharacterized protein LOC107434072 [Ziziphus jujuba]) HSP 1 Score: 224.6 bits (571), Expect = 1.8e-55 Identity = 140/258 (54.26%), Postives = 171/258 (66.28%), Query Frame = 1
BLAST of Cp4.1LG04g03090 vs. NCBI nr
Match: gi|590690781|ref|XP_007043602.1| (Microtubule-associated protein 6, putative [Theobroma cacao]) HSP 1 Score: 220.7 bits (561), Expect = 2.6e-54 Identity = 131/246 (53.25%), Postives = 162/246 (65.85%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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