Cp4.1LG03g08790 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATAAAAAATAAAAAAAATTCGGGGAAGATTTGCAAAAAAATGCGGTCGGATCTTGCTTCGTGAGATGTTAATCGTGGTGGGTCATTTTTTTCCCCCTCCTCCCTTCCTCTTAAAACCAACGCAAACCCACCAATTTCCCATTCTCTCTCTCTCTCTCTCTGATTCTGAATTTGGGGCAATCATGGTTATGGCTGCCGATTCTCAGTTCCATGTGCTTGCCGTCGATGATAGCCTCATAGATAGGAAGCTCATCGAGAGGCTTCTCAAAACCTCCTCGTATCAAGGTATTTTTCTATCTTCTGTCTTTTTTAATCCAATTTCTGTTTGTTTAGGAATTGGTTTGGTGAATTCTTTGTTTGATTTGGTTTCTGTAGTTACTACGGTTGATTCAGGGAGCAAGGCCTTGGAATTTCTGGGTTTGATTGAAGAACATCAACATACAAACTTCAAATCTCCTTCTTCTTCTTCCTCCTCCAACATTCATCATCAGGTTATTCTATTTCGGATTTGGATTCGTTCCTTTTCATTCCATTTTCTTCTTCTGTTTCTGAAATTTTGTGAGTTTTTGTTTTCAGGAAGTGGAAGTGAATCTTATCATTACTGATTACTGCATGCCTGGGATGACTGGCTTCGATTTGCTCAAGAAAGTTAAGGTAAGAGGGAAAGAAAGAAATAAAGGAAGATGTTCTATAGTTTCTTAGTTCTACTCTTTGTTGTTGCTGTTGTTCTTCTTCTTTCTCTGTTTTTTTTTTTTTTTTTTGGGNGTTTGTCAACCCGCCACTTGTTTGAGGAAAATTCTCAGAGAATATTTTCTCACTAACTTTCTTCTGTTTCCTTTCTAGTCAATTAGATCTGTGTTATGCTGTTATTCTCAATACTTTCCTGGAAAATCTGTTTTTCTTTGGAAACAAACAGAGAGACTAATTAGGAACTTGCTTATTCACTACTCCTGGAACTTTCCTGGAAAATCTGTTTTTCTCTGGAAACAAACATAACTAGTTAGGAATTTGCCTAATCACTACTCCTGAAACTTTCCTGGAAAATCTGTTTTTCTCTGGAAACAAACAGAGACTAATTAGGAATTTGTCTAATCACTACGTCTGGAACTTAACTGGAAAATCTGTTTTCCTTGAAAAACAAACAAACACAAACAGAGGACAAATGAATGGACGTAAATCTAACAATTTCTGTGAATTTGCAGGAATCGACGTCTCTTAGAAACATACCAGTGGTGATAATGTCATCCGAAAACTTACCTTCGAGAATCAGCAGGTAAGGAATCAAGAATCGATTTGCAATTTCTTCTTTAATGGATCGATCTCTGATATCGCTTGATCAGAAACTGATGTAATTGAATTTGATTGATGTTCGAAGTAGATGTTTAGAAGAAGGCGCGGAAGAATTCTTCCTGAAGCCAGTTCGATTGTGCGATGTGAATAAACTGAAACCACACATAATGAAGACGAAATTAAAGGATCAAAATCAAGAAGAAGAAGAAGAAACAACAGTGGCCAAATTCGAATCGGTTGAAAAACAACAACAACAACAACAACAGATTCAAATGAACAGTAACAAGAGAAAGGCGGGGATGGATGAAGAAGGTGTAGGAGAGGACAGAAGAAGAAGAATAAGGTACAATAGCAATGGCGTCGCGACTGTGAATTGATGGTGTTGATTAATGGTGAGGCGCCATGAGAGAAATTGTACATGGAGGTTCTGAAAATTAGAGGAAGTTTTTTTTTTCTTTTCTTTTTTTTACTATGGAGATTTGTTATACAAAAATTTCAATTTTGTGTCTTCTAAATTTATATTTAATATTTTTTTATTTTAAAAAGTTTAAATTCGAC AAATAAAAAATAAAAAAAATTCGGGGAAGATTTGCAAAAAAATGCGGTCGGATCTTGCTTCGTGAGATGTTAATCGTGGTGGGTCATTTTTTTCCCCCTCCTCCCTTCCTCTTAAAACCAACGCAAACCCACCAATTTCCCATTCTCTCTCTCTCTCTCTCTGATTCTGAATTTGGGGCAATCATGGTTATGGCTGCCGATTCTCAGTTCCATGTGCTTGCCGTCGATGATAGCCTCATAGATAGGAAGCTCATCGAGAGGCTTCTCAAAACCTCCTCGTATCAAGTTACTACGGTTGATTCAGGGAGCAAGGCCTTGGAATTTCTGGGTTTGATTGAAGAACATCAACATACAAACTTCAAATCTCCTTCTTCTTCTTCCTCCTCCAACATTCATCATCAGGAATCGACGTCTCTTAGAAACATACCAGTGGTGATAATGTCATCCGAAAACTTACCTTCGAGAATCAGCAGATGTTTAGAAGAAGGCGCGGAAGAATTCTTCCTGAAGCCAGTTCGATTGTGCGATGTGAATAAACTGAAACCACACATAATGAAGACGAAATTAAAGGATCAAAATCAAGAAGAAGAAGAAGAAACAACAGTGGCCAAATTCGAATCGGTTGAAAAACAACAACAACAACAACAACAGATTCAAATGAACAGTAACAAGAGAAAGGCGGGGATGGATGAAGAAGGTGTAGGAGAGGACAGAAGAAGAAGAATAAGGTACAATAGCAATGGCGTCGCGACTGTGAATTGATGGTGTTGATTAATGGTGAGGCGCCATGAGAGAAATTGTACATGGAGGTTCTGAAAATTAGAGGAAGTTTTTTTTTTCTTTTCTTTTTTTTACTATGGAGATTTGTTATACAAAAATTTCAATTTTGTGTCTTCTAAATTTATATTTAATATTTTTTTATTTTAAAAAGTTTAAATTCGAC ATGTTAATCGTGGTGGGTCATTTTTTTCCCCCTCCTCCCTTCCTCTTAAAACCAACGCAAACCCACCAATTTCCCATTCTCTCTCTCTCTCTCTCTGATTCTGAATTTGGGGCAATCATGGTTATGGCTGCCGATTCTCAGTTCCATGTGCTTGCCGTCGATGATAGCCTCATAGATAGGAAGCTCATCGAGAGGCTTCTCAAAACCTCCTCGTATCAAGTTACTACGGTTGATTCAGGGAGCAAGGCCTTGGAATTTCTGGGTTTGATTGAAGAACATCAACATACAAACTTCAAATCTCCTTCTTCTTCTTCCTCCTCCAACATTCATCATCAGGAATCGACGTCTCTTAGAAACATACCAGTGGTGATAATGTCATCCGAAAACTTACCTTCGAGAATCAGCAGATGTTTAGAAGAAGGCGCGGAAGAATTCTTCCTGAAGCCAGTTCGATTGTGCGATGTGAATAAACTGAAACCACACATAATGAAGACGAAATTAAAGGATCAAAATCAAGAAGAAGAAGAAGAAACAACAGTGGCCAAATTCGAATCGGTTGAAAAACAACAACAACAACAACAACAGATTCAAATGAACAGTAACAAGAGAAAGGCGGGGATGGATGAAGAAGGTGTAGGAGAGGACAGAAGAAGAAGAATAAGGTACAATAGCAATGGCGTCGCGACTGTGAATTGA MLIVVGHFFPPPPFLLKPTQTHQFPILSLSLSDSEFGAIMVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQHTNFKSPSSSSSSNIHHQESTSLRNIPVVIMSSENLPSRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQEEEEETTVAKFESVEKQQQQQQQIQMNSNKRKAGMDEEGVGEDRRRRIRYNSNGVATVN
BLAST of Cp4.1LG03g08790 vs. Swiss-Prot
Match: ARR9_ARATH (Two-component response regulator ARR9 OS=Arabidopsis thaliana GN=ARR9 PE=1 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 2.6e-41 Identity = 122/240 (50.83%), Postives = 147/240 (61.25%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. Swiss-Prot
Match: ARR8_ARATH (Two-component response regulator ARR8 OS=Arabidopsis thaliana GN=ARR8 PE=1 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 4.5e-38 Identity = 112/226 (49.56%), Postives = 142/226 (62.83%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. Swiss-Prot
Match: ORR10_ORYSI (Two-component response regulator ORR10 OS=Oryza sativa subsp. indica GN=RR10 PE=2 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 8.6e-37 Identity = 98/192 (51.04%), Postives = 129/192 (67.19%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. Swiss-Prot
Match: ORR10_ORYSJ (Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica GN=RR10 PE=2 SV=2) HSP 1 Score: 155.2 bits (391), Expect = 8.6e-37 Identity = 98/192 (51.04%), Postives = 129/192 (67.19%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. Swiss-Prot
Match: ORR9_ORYSI (Two-component response regulator ORR9 OS=Oryza sativa subsp. indica GN=RR9 PE=2 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.5e-36 Identity = 98/192 (51.04%), Postives = 129/192 (67.19%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. TrEMBL
Match: A0A0A0LCF4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G822100 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 5.0e-60 Identity = 149/224 (66.52%), Postives = 170/224 (75.89%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. TrEMBL
Match: A0A061EV85_THECC (Type-a response regulator OS=Theobroma cacao GN=TCM_024355 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 7.5e-48 Identity = 130/221 (58.82%), Postives = 158/221 (71.49%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. TrEMBL
Match: I1N8U6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G132300 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.3e-47 Identity = 117/167 (70.06%), Postives = 135/167 (80.84%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. TrEMBL
Match: F6HK97_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g05390 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 2.4e-46 Identity = 124/211 (58.77%), Postives = 144/211 (68.25%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. TrEMBL
Match: M5VQY6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011054mg PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 7.0e-46 Identity = 133/233 (57.08%), Postives = 149/233 (63.95%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. TAIR10
Match: AT3G57040.1 (AT3G57040.1 response regulator 9) HSP 1 Score: 170.2 bits (430), Expect = 1.4e-42 Identity = 122/240 (50.83%), Postives = 147/240 (61.25%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. TAIR10
Match: AT2G41310.1 (AT2G41310.1 response regulator 3) HSP 1 Score: 159.5 bits (402), Expect = 2.6e-39 Identity = 112/226 (49.56%), Postives = 142/226 (62.83%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. TAIR10
Match: AT2G40670.2 (AT2G40670.2 response regulator 16) HSP 1 Score: 118.2 bits (295), Expect = 6.5e-27 Identity = 65/139 (46.76%), Postives = 92/139 (66.19%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. TAIR10
Match: AT3G48100.1 (AT3G48100.1 response regulator 5) HSP 1 Score: 116.3 bits (290), Expect = 2.5e-26 Identity = 66/139 (47.48%), Postives = 91/139 (65.47%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. TAIR10
Match: AT1G59940.1 (AT1G59940.1 response regulator 3) HSP 1 Score: 113.6 bits (283), Expect = 1.6e-25 Identity = 65/131 (49.62%), Postives = 89/131 (67.94%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. NCBI nr
Match: gi|659085157|ref|XP_008443276.1| (PREDICTED: two-component response regulator ARR8-like isoform X2 [Cucumis melo]) HSP 1 Score: 245.0 bits (624), Expect = 1.3e-61 Identity = 151/224 (67.41%), Postives = 172/224 (76.79%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. NCBI nr
Match: gi|659085155|ref|XP_008443275.1| (PREDICTED: two-component response regulator ARR8-like isoform X1 [Cucumis melo]) HSP 1 Score: 244.2 bits (622), Expect = 2.2e-61 Identity = 151/234 (64.53%), Postives = 171/234 (73.08%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. NCBI nr
Match: gi|449437731|ref|XP_004136644.1| (PREDICTED: two-component response regulator ARR9 [Cucumis sativus]) HSP 1 Score: 239.2 bits (609), Expect = 7.2e-60 Identity = 149/224 (66.52%), Postives = 170/224 (75.89%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. NCBI nr
Match: gi|590634965|ref|XP_007028513.1| (Type-a response regulator [Theobroma cacao]) HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47 Identity = 130/221 (58.82%), Postives = 158/221 (71.49%), Query Frame = 1
BLAST of Cp4.1LG03g08790 vs. NCBI nr
Match: gi|571552986|ref|XP_006603749.1| (PREDICTED: uncharacterized protein LOC100814494 isoform X1 [Glycine max]) HSP 1 Score: 198.0 bits (502), Expect = 1.8e-47 Identity = 117/167 (70.06%), Postives = 135/167 (80.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |