Lsi05G003220 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTGAAGCTAATTTAGAAGCTTCAAAATGGCTCAGATTGCTAAGATCTCAGAGCAAGTGAAGCTCAAGTCTTCTGCTCACAAATTCTATGAGTTTTTCAAGAATAATATGGACTATGTCTTTGTTCAAATGTTCCCTGAAATTTACAAGAGCTGTAAGGTTGTCGAAGGAAATGGTTTTTCTCATGGCAGCGTCATCCATTTAAAATATAACGCAGGTGAGGATCTGTATCAACCATTCTTTCGAACTTTTTCGGTAATGGTTCCTACTACTTTCAAATGTTCTATTTTAATTTTGAACTTTCAAACGGATCCCTTTTTTCTCCAAAAAAAAAAAAAAACGTATTTATTTATTTTTTATTTAAAAACTTATTCCAAAAACACTATTATTAAGAATCAATAACAAAAAGATCATTAGGGTTTGCTAGACAACCTCCACAACGTAACATCATATTCTTGCTTATTGATATTAATATATCATGTGTCTTAACTAATTGAAGTATGCTTAATTTAACTGATATGAATACAATTGACATGTCGGGTTTTATATGTCAATTATATATAGGGATAGTTGCAAATGTAGCAATCAGATTCAAAGTAATAGCATATATAGCAACATTTTTAAAAAATTGCAAATATAGCAAAGTTTATCACTGATAGACTTTTATGGTTTAGGTGGTCTATCAATGATAGAAGTTTATCACTGATAGACTTTGCTATATTTGCAATTTTTTTAAAAAATGTTCTATACACTTGATTATTATTCCTGAAATTGCTACTCATTACAACTACCTTTATATATACACCTTTATAACTGAGTTTCAATCCAAGTCCTTAGGATTTCTTTTGTTTTCTGGTGGAAATTTACATAGGAAGGCCAGAAGAGGTAAAAGAGAGGCTGGCTATTGATGATGCAAACAAATCAATAACTTTTGAGTGCATTGAAGGAGATCCATTAAGAGATTTTGAAGTGATCAAATTGAAATTTGAAGTTTTTGAGAATGGTAGCAATGGCAGCTCAGTTAATTGGTCATTAGAATTTGTGAAGGCAAATGAAGATGTGGCTGCACCACATCACTATCTCCTATGTGTAGCTAAAGTTGGCAAAGGCCTTGATGATTTCCTTTGCAACAACTGAACTAAAACCCATCCAAATTAGCTTGGATATTGAAATATGATCTAAATAAATTATCTCCTTATCTTTATTATTGTTGTTATCATATGTGTATTTTGAAGCTTAATTGAAAGAAATATTAATGGTGATGGTGCCATATTCTA ATTTGAAGCTAATTTAGAAGCTTCAAAATGGCTCAGATTGCTAAGATCTCAGAGCAAGTGAAGCTCAAGTCTTCTGCTCACAAATTCTATGAGTTTTTCAAGAATAATATGGACTATGTCTTTGTTCAAATGTTCCCTGAAATTTACAAGAGCTGTAAGGTTGTCGAAGGAAATGGTTTTTCTCATGGCAGCGTCATCCATTTAAAATATAACGCAGGAAGGCCAGAAGAGGTAAAAGAGAGGCTGGCTATTGATGATGCAAACAAATCAATAACTTTTGAGTGCATTGAAGGAGATCCATTAAGAGATTTTGAAGTGATCAAATTGAAATTTGAAGTTTTTGAGAATGGTAGCAATGGCAGCTCAGTTAATTGGTCATTAGAATTTGTGAAGGCAAATGAAGATGTGGCTGCACCACATCACTATCTCCTATGTGTAGCTAAAGTTGGCAAAGGCCTTGATGATTTCCTTTGCAACAACTGAACTAAAACCCATCCAAATTAGCTTGGATATTGAAATATGATCTAAATAAATTATCTCCTTATCTTTATTATTGTTGTTATCATATGTGTATTTTGAAGCTTAATTGAAAGAAATATTAATGGTGATGGTGCCATATTCTA ATGGCTCAGATTGCTAAGATCTCAGAGCAAGTGAAGCTCAAGTCTTCTGCTCACAAATTCTATGAGTTTTTCAAGAATAATATGGACTATGTCTTTGTTCAAATGTTCCCTGAAATTTACAAGAGCTGTAAGGTTGTCGAAGGAAATGGTTTTTCTCATGGCAGCGTCATCCATTTAAAATATAACGCAGGAAGGCCAGAAGAGGTAAAAGAGAGGCTGGCTATTGATGATGCAAACAAATCAATAACTTTTGAGTGCATTGAAGGAGATCCATTAAGAGATTTTGAAGTGATCAAATTGAAATTTGAAGTTTTTGAGAATGGTAGCAATGGCAGCTCAGTTAATTGGTCATTAGAATTTGTGAAGGCAAATGAAGATGTGGCTGCACCACATCACTATCTCCTATGTGTAGCTAAAGTTGGCAAAGGCCTTGATGATTTCCTTTGCAACAACTGA MAQIAKISEQVKLKSSAHKFYEFFKNNMDYVFVQMFPEIYKSCKVVEGNGFSHGSVIHLKYNAGRPEEVKERLAIDDANKSITFECIEGDPLRDFEVIKLKFEVFENGSNGSSVNWSLEFVKANEDVAAPHHYLLCVAKVGKGLDDFLCNN
BLAST of Lsi05G003220 vs. Swiss-Prot
Match: MLP34_ARATH (MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 5.1e-14 Identity = 47/145 (32.41%), Postives = 81/145 (55.86%), Query Frame = 1
BLAST of Lsi05G003220 vs. Swiss-Prot
Match: ML146_PAPSO (Major latex protein 146 OS=Papaver somniferum GN=MLP146 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 3.3e-13 Identity = 43/148 (29.05%), Postives = 75/148 (50.68%), Query Frame = 1
BLAST of Lsi05G003220 vs. Swiss-Prot
Match: MLP15_PAPSO (Major latex protein 15 OS=Papaver somniferum GN=MLP15 PE=2 SV=2) HSP 1 Score: 73.9 bits (180), Expect = 1.6e-12 Identity = 48/149 (32.21%), Postives = 75/149 (50.34%), Query Frame = 1
BLAST of Lsi05G003220 vs. Swiss-Prot
Match: MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=2 SV=2) HSP 1 Score: 73.6 bits (179), Expect = 2.1e-12 Identity = 45/148 (30.41%), Postives = 80/148 (54.05%), Query Frame = 1
BLAST of Lsi05G003220 vs. Swiss-Prot
Match: KIRO_ACTDE (Kirola OS=Actinidia deliciosa PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11 Identity = 42/144 (29.17%), Postives = 77/144 (53.47%), Query Frame = 1
BLAST of Lsi05G003220 vs. TrEMBL
Match: A0A0A0LCM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G333840 PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 2.2e-72 Identity = 128/151 (84.77%), Postives = 143/151 (94.70%), Query Frame = 1
BLAST of Lsi05G003220 vs. TrEMBL
Match: A0A0A0LA22_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G331340 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 7.1e-55 Identity = 109/152 (71.71%), Postives = 121/152 (79.61%), Query Frame = 1
BLAST of Lsi05G003220 vs. TrEMBL
Match: A0A0A0L9D7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219190 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.3e-53 Identity = 107/152 (70.39%), Postives = 123/152 (80.92%), Query Frame = 1
BLAST of Lsi05G003220 vs. TrEMBL
Match: A0A0A0L771_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G337350 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 8.1e-35 Identity = 84/154 (54.55%), Postives = 108/154 (70.13%), Query Frame = 1
BLAST of Lsi05G003220 vs. TrEMBL
Match: A0A0A0L7N6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G331330 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 3.1e-34 Identity = 78/154 (50.65%), Postives = 111/154 (72.08%), Query Frame = 1
BLAST of Lsi05G003220 vs. TAIR10
Match: AT1G70850.1 (AT1G70850.1 MLP-like protein 34) HSP 1 Score: 79.0 bits (193), Expect = 2.9e-15 Identity = 47/145 (32.41%), Postives = 81/145 (55.86%), Query Frame = 1
BLAST of Lsi05G003220 vs. TAIR10
Match: AT1G70840.1 (AT1G70840.1 MLP-like protein 31) HSP 1 Score: 73.6 bits (179), Expect = 1.2e-13 Identity = 45/148 (30.41%), Postives = 80/148 (54.05%), Query Frame = 1
BLAST of Lsi05G003220 vs. TAIR10
Match: AT5G28010.1 (AT5G28010.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 68.9 bits (167), Expect = 3.0e-12 Identity = 41/148 (27.70%), Postives = 79/148 (53.38%), Query Frame = 1
BLAST of Lsi05G003220 vs. TAIR10
Match: AT2G01520.1 (AT2G01520.1 MLP-like protein 328) HSP 1 Score: 65.5 bits (158), Expect = 3.3e-11 Identity = 39/147 (26.53%), Postives = 71/147 (48.30%), Query Frame = 1
BLAST of Lsi05G003220 vs. TAIR10
Match: AT1G24020.1 (AT1G24020.1 MLP-like protein 423) HSP 1 Score: 65.5 bits (158), Expect = 3.3e-11 Identity = 44/142 (30.99%), Postives = 75/142 (52.82%), Query Frame = 1
BLAST of Lsi05G003220 vs. NCBI nr
Match: gi|659114440|ref|XP_008457055.1| (PREDICTED: MLP-like protein 34 [Cucumis melo]) HSP 1 Score: 283.1 bits (723), Expect = 2.8e-73 Identity = 129/151 (85.43%), Postives = 144/151 (95.36%), Query Frame = 1
BLAST of Lsi05G003220 vs. NCBI nr
Match: gi|449464138|ref|XP_004149786.1| (PREDICTED: kirola [Cucumis sativus]) HSP 1 Score: 279.6 bits (714), Expect = 3.1e-72 Identity = 128/151 (84.77%), Postives = 143/151 (94.70%), Query Frame = 1
BLAST of Lsi05G003220 vs. NCBI nr
Match: gi|778680829|ref|XP_004151203.2| (PREDICTED: major latex protein 149-like [Cucumis sativus]) HSP 1 Score: 221.5 bits (563), Expect = 1.0e-54 Identity = 109/152 (71.71%), Postives = 121/152 (79.61%), Query Frame = 1
BLAST of Lsi05G003220 vs. NCBI nr
Match: gi|700202691|gb|KGN57824.1| (hypothetical protein Csa_3G331340 [Cucumis sativus]) HSP 1 Score: 221.5 bits (563), Expect = 1.0e-54 Identity = 109/152 (71.71%), Postives = 121/152 (79.61%), Query Frame = 1
BLAST of Lsi05G003220 vs. NCBI nr
Match: gi|778680249|ref|XP_011651277.1| (PREDICTED: major latex protein 146-like [Cucumis sativus]) HSP 1 Score: 217.2 bits (552), Expect = 1.9e-53 Identity = 107/152 (70.39%), Postives = 123/152 (80.92%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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