Lsi10G004380.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAATTTGTTTGCCTTCGGTCCTCCTTGGCGTCGCCAAGCAAATTCTCAAGAAGCAGTCTGTTTCTTCAAGATGTCAATCCAATGTTCCTAAAGGCCACATTCCGGTGTACGTAGGAAAAACCGAAAGAAAGCGGTTTTTTGTTCCGATATCTTACTTGAGTCATCCTTCATTTGTAGACTTGCTCAAGAGGGCTGAAGAAGAGTTTGGATTCAGCCACCCAATTGGAGGTTTGACAATTCCCTGCAAAGAAGAAGCCTTCATTGATATTACTTCTAGACTGCATACTTCATGA ATGGGAATTTGTTTGCCTTCGGTCCTCCTTGGCGTCGCCAAGCAAATTCTCAAGAAGCAGTCTGTTTCTTCAAGATGTCAATCCAATGTTCCTAAAGGCCACATTCCGGTGTACGTAGGAAAAACCGAAAGAAAGCGGTTTTTTGTTCCGATATCTTACTTGAGTCATCCTTCATTTGTAGACTTGCTCAAGAGGGCTGAAGAAGAGTTTGGATTCAGCCACCCAATTGGAGGTTTGACAATTCCCTGCAAAGAAGAAGCCTTCATTGATATTACTTCTAGACTGCATACTTCATGA ATGGGAATTTGTTTGCCTTCGGTCCTCCTTGGCGTCGCCAAGCAAATTCTCAAGAAGCAGTCTGTTTCTTCAAGATGTCAATCCAATGTTCCTAAAGGCCACATTCCGGTGTACGTAGGAAAAACCGAAAGAAAGCGGTTTTTTGTTCCGATATCTTACTTGAGTCATCCTTCATTTGTAGACTTGCTCAAGAGGGCTGAAGAAGAGTTTGGATTCAGCCACCCAATTGGAGGTTTGACAATTCCCTGCAAAGAAGAAGCCTTCATTGATATTACTTCTAGACTGCATACTTCATGA MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS
BLAST of Lsi10G004380.1 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 5.1e-23 Identity = 49/85 (57.65%), Postives = 66/85 (77.65%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 1.9e-22 Identity = 50/87 (57.47%), Postives = 68/87 (78.16%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 3.3e-22 Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 5.6e-22 Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 7.3e-22 Identity = 49/86 (56.98%), Postives = 67/86 (77.91%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. TrEMBL
Match: A0A0A0LLF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258750 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 1.0e-38 Identity = 81/98 (82.65%), Postives = 88/98 (89.80%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. TrEMBL
Match: A0A0A0LM65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 1.8e-38 Identity = 80/98 (81.63%), Postives = 89/98 (90.82%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. TrEMBL
Match: A0A0A0LIZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 1.9e-37 Identity = 76/98 (77.55%), Postives = 87/98 (88.78%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. TrEMBL
Match: A0A0A0LJ92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258690 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 9.6e-37 Identity = 78/98 (79.59%), Postives = 87/98 (88.78%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 1.8e-35 Identity = 72/98 (73.47%), Postives = 86/98 (87.76%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 114.0 bits (284), Expect = 5.2e-26 Identity = 57/100 (57.00%), Postives = 71/100 (71.00%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 110.9 bits (276), Expect = 4.4e-25 Identity = 54/93 (58.06%), Postives = 71/93 (76.34%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 109.8 bits (273), Expect = 9.8e-25 Identity = 55/92 (59.78%), Postives = 71/92 (77.17%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 108.2 bits (269), Expect = 2.9e-24 Identity = 49/85 (57.65%), Postives = 66/85 (77.65%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 106.3 bits (264), Expect = 1.1e-23 Identity = 48/71 (67.61%), Postives = 57/71 (80.28%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. NCBI nr
Match: gi|778669595|ref|XP_011649275.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 167.2 bits (422), Expect = 1.5e-38 Identity = 81/98 (82.65%), Postives = 88/98 (89.80%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. NCBI nr
Match: gi|778669591|ref|XP_011649272.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 166.4 bits (420), Expect = 2.5e-38 Identity = 80/98 (81.63%), Postives = 89/98 (90.82%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. NCBI nr
Match: gi|659115594|ref|XP_008457634.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 165.6 bits (418), Expect = 4.3e-38 Identity = 80/98 (81.63%), Postives = 88/98 (89.80%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. NCBI nr
Match: gi|449458550|ref|XP_004147010.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 162.9 bits (411), Expect = 2.8e-37 Identity = 76/98 (77.55%), Postives = 87/98 (88.78%), Query Frame = 1
BLAST of Lsi10G004380.1 vs. NCBI nr
Match: gi|659115590|ref|XP_008457631.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 161.0 bits (406), Expect = 1.1e-36 Identity = 75/98 (76.53%), Postives = 86/98 (87.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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