CmoCh19G006660.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G006660.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Hydroxyproline-rich glycoprotein family protein
Location	Cmo_Chr19 : 7145140 .. 7147327 (-)
Sequence length	1890

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGACTATAGACGGTAATAGCCAAAATAACAATGATCCCAACCTTGAACTCTCTCTCCGTATGCCATCTCAGTCTCCACGTGAATGGGGGCAACGGTCGACACCGACATCGACACCGGCATCGTCCCAAACTCCGAACCAACCGGTGGCGGTCCCTTGCTCCATCGAGCAAACTGTGAACCAATCGGAGGCGATTCCTCGCGCCATCGAGCAAATTTTGAGTCAACAGGTGGCAATCACTCAAGCCAATGGGGAAACTTCGAACCAATTGGTGATGACCCCAAACCCCGTAGGGGAAACTTTGAACCAACCGGTGGCGATCCCTTGTGCCACCGAGCAACGCCGGTTGGTTCGAAGTTTGAGCCTACCGACGACAATCACTCGGCCCATTGGGAAAACTCTGAACGAATTGTTGGCAATCCCTCACACCGTAAATGAAACTTTGAACCAATCGGTGGCAATCCCTCACGCCATCGAGCGAAGTTCTAGCCAACCAGCGACAATCACTTGGGCCATCGGGGAAACTATTAACCAATTGGAGGAGATCCCTCATAACATAAGGGAAACTTCGAATCAACCGGTGGCGATCCCTCGCGGCATCGAGCGAACTTCTAGCCAACCGGCGGCAACCACTTGGGCCATCGGGGAAACTCTTAACCAATTGGAGGAGATCCCTCACACCATAAGGGAAAGTTCGAACCAACCGGTGGCGATCCCTAGCACCATCGAGCAAACTTCGAGCCAACCAACGACAATCACTCGAGGCATTAGAGAAACTCTGAACCAATTAGTGACAATCCCTCACAACATAAGGGAAACTTCGAACCAACCGATGGCAATCCCTCGCGCCATTGAGCGAACTTCTAGCCAACCGGCGACAATCACTTGGGCCATCGGGGAAACTCTTAACCAATTGGAGGAGATCCCTCACAACATAAGGGAAACTTCGAACCAATCGGTGGCGATCCTTCACGCCACCGAGGAAACTTCGAGCCAACCAACGACAATCACTCGAGACATCAGAGAAACTCTAAACCAATTATTGGCAATCCCTCACAACATAAGGGAAACCTCGAACCAATCGGTAGCGATCCCTCACGCCATTGAGCAAACTTCGAGCCAACCACCAACAATCACTCAGGCCATTAGGGAAACTCTGAACCAACCGGTGGCGATCCCTCAGACCGTAGAGGAAACTCCAAACCAATCAACCACAATTCATCAAGCCATTGAGCAAACTCCAAACCAATCAACTACAATCCCTCAAGCCACAAATGGACACTCTACATCAAGACCGAGACGAAGACGAAGTAGAACGAGAGCAGACACCAGGAGGATCGAGCCACCGTATCCATGGTCAGCCGAGCAACGAGCATCAATCCACAATCTCGAGTACCTCCAATCAAACAACATCGTTACGATCAAAGGCGATGTGAGGTGCAAAAAATGCGAGAGATTTTACGAAATCGAGTACAATTTGATGAACAAGTTCGATGAGATAGCAAGATTCATAGAAAGAGAAAGAGATAACATGCATGATAGAGCTCCAATTTGTTGGAAAAACCCTATTTTACCAAATTGTGAGCATTGCAGGGAAGAAAACTGCGTAGAGCCAATGATACCCGACGAGGAGGACGACAACCAATTCAGTAGAATCAATTGGCTGTTCTTGCTTTTGGGGCAATTGATAGGACGTTTAAAGCTCAAACAACTCAAATACTTCTGTGCTCATACCTATAATCATCGAACTGGGGCTAAGGATCGTCTCATCTTTCTCACTTATCTTGCTTTGTGTAAGCAACTTCAACCCTCCAATCGTCTCTTCAATTGCTAATTCATATTAAGATATTACTTTGATTTCGGGTATGAGTATGAGTTTGATTTCAGTCGATAATATGTGTTTCTATTAGTAATATCGTTTTTGTTTTTAGGTCTAACATGTAGGTGATTCGAGCTTCCGTTTGGAATATATTTATAATGATTTATGTTTCAGTTTGGATATGAGTAGCTCAGAGATATTACTTCGATTCGGGGTATGAATATGAATTTGATTTCAGTTGATAATATATGTTTTTTTTTTGAGACTAACATGCAGAATAGTGATTCAAGCTTCGGTTTGAAATATATTTATAATGATTTATGTTTTAGTTTGGATATATTTTTTTTAGAGTCGAATGTATAACTAA

mRNA sequence

ATGAAGACTATAGACGGTAATAGCCAAAATAACAATGATCCCAACCTTGAACTCTCTCTCCGTATGCCATCTCAGTCTCCACGTGAATGGGGGCAACGGTCGACACCGACATCGACACCGGCATCGTCCCAAACTCCGAACCAACCGGTGGCGGTCCCTTGCTCCATCGAGCAAACTGTGAACCAATCGGAGGCGATTCCTCGCGCCATCGAGCAAATTTTGAGTCAACAGGTGGCAATCACTCAAGCCAATGGGGAAACTTCGAACCAATTGGTGATGACCCCAAACCCCGTAGGGGAAACTTTGAACCAACCGGTGGCGATCCCTTGTGCCACCGAGCAACGCCGGTTGGTTCGAAGTTTGAGCCTACCGACGACAATCACTCGGCCCATTGGGAAAACTCTGAACGAATTGTTGGCAATCCCTCACACCGTAAATGAAACTTTGAACCAATCGGTGGCAATCCCTCACGCCATCGAGCGAAGTTCTAGCCAACCAGCGACAATCACTTGGGCCATCGGGGAAACTATTAACCAATTGGAGGAGATCCCTCATAACATAAGGGAAACTTCGAATCAACCGGTGGCGATCCCTCGCGGCATCGAGCGAACTTCTAGCCAACCGGCGGCAACCACTTGGGCCATCGGGGAAACTCTTAACCAATTGGAGGAGATCCCTCACACCATAAGGGAAAGTTCGAACCAACCGGTGGCGATCCCTAGCACCATCGAGCAAACTTCGAGCCAACCAACGACAATCACTCGAGGCATTAGAGAAACTCTGAACCAATTAGTGACAATCCCTCACAACATAAGGGAAACTTCGAACCAACCGATGGCAATCCCTCGCGCCATTGAGCGAACTTCTAGCCAACCGGCGACAATCACTTGGGCCATCGGGGAAACTCTTAACCAATTGGAGGAGATCCCTCACAACATAAGGGAAACTTCGAACCAATCGGTGGCGATCCTTCACGCCACCGAGGAAACTTCGAGCCAACCAACGACAATCACTCGAGACATCAGAGAAACTCTAAACCAATTATTGGCAATCCCTCACAACATAAGGGAAACCTCGAACCAATCGGTAGCGATCCCTCACGCCATTGAGCAAACTTCGAGCCAACCACCAACAATCACTCAGGCCATTAGGGAAACTCTGAACCAACCGGTGGCGATCCCTCAGACCGTAGAGGAAACTCCAAACCAATCAACCACAATTCATCAAGCCATTGAGCAAACTCCAAACCAATCAACTACAATCCCTCAAGCCACAAATGGACACTCTACATCAAGACCGAGACGAAGACGAAGTAGAACGAGAGCAGACACCAGGAGGATCGAGCCACCGTATCCATGGTCAGCCGAGCAACGAGCATCAATCCACAATCTCGAGTACCTCCAATCAAACAACATCGTTACGATCAAAGGCGATGTGAGGTGCAAAAAATGCGAGAGATTTTACGAAATCGAGTACAATTTGATGAACAAGTTCGATGAGATAGCAAGATTCATAGAAAGAGAAAGAGATAACATGCATGATAGAGCTCCAATTTGTTGGAAAAACCCTATTTTACCAAATTGTGAGCATTGCAGGGAAGAAAACTGCGTAGAGCCAATGATACCCGACGAGGAGGACGACAACCAATTCAGTAGAATCAATTGGCTGTTCTTGCTTTTGGGGCAATTGATAGGACGTTTAAAGCTCAAACAACTCAAATACTTCTGTGCTCATACCTATAATCATCGAACTGGGGCTAAGGATCGTCTCATCTTTCTCACTTATCTTGCTTTGTGTAAGCAACTTCAACCCTCCAATCGTCTAACATGTAGTTTGGATATGAGTAGCTCAGAGATATTACTTCGATTCGGGAGTCGAATGTATAACTAA

Coding sequence (CDS)

ATGAAGACTATAGACGGTAATAGCCAAAATAACAATGATCCCAACCTTGAACTCTCTCTCCGTATGCCATCTCAGTCTCCACGTGAATGGGGGCAACGGTCGACACCGACATCGACACCGGCATCGTCCCAAACTCCGAACCAACCGGTGGCGGTCCCTTGCTCCATCGAGCAAACTGTGAACCAATCGGAGGCGATTCCTCGCGCCATCGAGCAAATTTTGAGTCAACAGGTGGCAATCACTCAAGCCAATGGGGAAACTTCGAACCAATTGGTGATGACCCCAAACCCCGTAGGGGAAACTTTGAACCAACCGGTGGCGATCCCTTGTGCCACCGAGCAACGCCGGTTGGTTCGAAGTTTGAGCCTACCGACGACAATCACTCGGCCCATTGGGAAAACTCTGAACGAATTGTTGGCAATCCCTCACACCGTAAATGAAACTTTGAACCAATCGGTGGCAATCCCTCACGCCATCGAGCGAAGTTCTAGCCAACCAGCGACAATCACTTGGGCCATCGGGGAAACTATTAACCAATTGGAGGAGATCCCTCATAACATAAGGGAAACTTCGAATCAACCGGTGGCGATCCCTCGCGGCATCGAGCGAACTTCTAGCCAACCGGCGGCAACCACTTGGGCCATCGGGGAAACTCTTAACCAATTGGAGGAGATCCCTCACACCATAAGGGAAAGTTCGAACCAACCGGTGGCGATCCCTAGCACCATCGAGCAAACTTCGAGCCAACCAACGACAATCACTCGAGGCATTAGAGAAACTCTGAACCAATTAGTGACAATCCCTCACAACATAAGGGAAACTTCGAACCAACCGATGGCAATCCCTCGCGCCATTGAGCGAACTTCTAGCCAACCGGCGACAATCACTTGGGCCATCGGGGAAACTCTTAACCAATTGGAGGAGATCCCTCACAACATAAGGGAAACTTCGAACCAATCGGTGGCGATCCTTCACGCCACCGAGGAAACTTCGAGCCAACCAACGACAATCACTCGAGACATCAGAGAAACTCTAAACCAATTATTGGCAATCCCTCACAACATAAGGGAAACCTCGAACCAATCGGTAGCGATCCCTCACGCCATTGAGCAAACTTCGAGCCAACCACCAACAATCACTCAGGCCATTAGGGAAACTCTGAACCAACCGGTGGCGATCCCTCAGACCGTAGAGGAAACTCCAAACCAATCAACCACAATTCATCAAGCCATTGAGCAAACTCCAAACCAATCAACTACAATCCCTCAAGCCACAAATGGACACTCTACATCAAGACCGAGACGAAGACGAAGTAGAACGAGAGCAGACACCAGGAGGATCGAGCCACCGTATCCATGGTCAGCCGAGCAACGAGCATCAATCCACAATCTCGAGTACCTCCAATCAAACAACATCGTTACGATCAAAGGCGATGTGAGGTGCAAAAAATGCGAGAGATTTTACGAAATCGAGTACAATTTGATGAACAAGTTCGATGAGATAGCAAGATTCATAGAAAGAGAAAGAGATAACATGCATGATAGAGCTCCAATTTGTTGGAAAAACCCTATTTTACCAAATTGTGAGCATTGCAGGGAAGAAAACTGCGTAGAGCCAATGATACCCGACGAGGAGGACGACAACCAATTCAGTAGAATCAATTGGCTGTTCTTGCTTTTGGGGCAATTGATAGGACGTTTAAAGCTCAAACAACTCAAATACTTCTGTGCTCATACCTATAATCATCGAACTGGGGCTAAGGATCGTCTCATCTTTCTCACTTATCTTGCTTTGTGTAAGCAACTTCAACCCTCCAATCGTCTAACATGTAGTTTGGATATGAGTAGCTCAGAGATATTACTTCGATTCGGGAGTCGAATGTATAACTAA

Homology

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BLAST of CmoCh19G006660.1 vs. TrEMBL
Match: A0A0A0KMQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G332030 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58
Identity = 128/228 (56.14%), Postives = 155/228 (67.98%), Query Frame = 1


Query: 386 TLNQPVAIPQTVEETPNQSTTIHQAIEQTPNQ-STTIPQ----ATNGHSTSRPRRRRSRT 445
           +L  P A P    E P  S+T+  +  Q PN+ S   PQ     +N     R R RR RT
Sbjct: 17  SLRPPSAQPPPAPEYPQLSSTLPSS--QIPNEESNATPQPNIETSNDQQQHRRRLRRRRT 76

Query: 446 RADTRRIEPPYPWSAEQRASIHNLEYLQSNNIVTIKGDVRCKKCERFYEIEYNLMNKFDE 505
           RAD  RIEPPYPW+ ++RA +H L+YLQSNNI+ IKG+V CKKCE  YEIEY+LMNK +E
Sbjct: 77  RADMTRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEMKYEIEYDLMNKVNE 136

Query: 506 IARFIERERDNMHDRAPICWKNPILPNCEHCREENCVEPMIPDEEDDNQFSRINWLFLLL 565
           I RF E E D+MHDRAP CW  P LPNC  C EE CV P+I  E+D    S+INWLFL L
Sbjct: 137 ITRFFEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDD----SKINWLFLFL 196

Query: 566 GQLIGRLKLKQLKYFCAHTYNHRTGAKDRLIFLTYLALCKQLQPSNRL 609
           GQ +G L+LKQLK+FCA +  HRTGAK+RL++L+Y AL  QLQPS  L
Sbjct: 197 GQFLGCLRLKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQPSPTL 238

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BLAST of CmoCh19G006660.1 vs. TrEMBL
Match: A0A0A0LAK2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G153700 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.5e-58
Identity = 124/237 (52.32%), Postives = 161/237 (67.93%), Query Frame = 1


Query: 369 IEQTSSQPPTITQAIRETLNQPVAIPQTVEETPNQSTTIHQAIEQTPNQSTTIPQATNGH 428
           +  T++ PP+   ++      P  +P    + P+   T ++A E+      T     N  
Sbjct: 71  LPSTAADPPS---SLLLPSQSPDLLPPDRLQPPSTQQTQNEADEEIRPTKRT----QNEP 130

Query: 429 STSRPRRRRSRTRADTRRIEPPYPWSAEQRASIHNLEYLQSNNIVTIKGDVRCKKCERFY 488
           +   PR +R+R +ADT RIEPPYPWS EQ A IH LEYLQ+NNI TIKG+V+CK+C+R  
Sbjct: 131 NEELPRPKRTRKQADTSRIEPPYPWSTEQGAIIHKLEYLQANNIRTIKGEVKCKRCKRKD 190

Query: 489 EIEYNLMNKFDEIARFIERERDNMHDRAPICWKNPILPNCEHCREENCVEPMIPDEEDDN 548
           EIEY+LM+KF+E+ +FIERE+ NMHDRAP CW NP L NC+ C +E CVEP+IP   D  
Sbjct: 191 EIEYDLMSKFEEMIKFIEREKCNMHDRAPNCWTNPTLLNCKFCNKEKCVEPIIPAGND-- 250

Query: 549 QFSRINWLFLLLGQLIGRLKLKQLKYFCAHTYNHRTGAKDRLIFLTYLALCKQLQPS 606
             ++INWLFLLLG  +GRLKL QLK+FC  T  HRTGAKDRL++ TY  LCKQLQP+
Sbjct: 251 --NKINWLFLLLGNFLGRLKLTQLKHFCTQTKIHRTGAKDRLVYFTYFGLCKQLQPT 296

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BLAST of CmoCh19G006660.1 vs. TrEMBL
Match: V4SNJ8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012452mg PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 2.0e-50
Identity = 106/210 (50.48%), Postives = 143/210 (68.10%), Query Frame = 1


Query: 400 TPNQSTTIHQAIEQTPNQSTTIPQATNGHSTSRPRRRRSRTR----ADTRRIEPPYPWSA 459
           TP  ST  HQ I  T N ++++  A  G S+SR R R+S  +      T  I  P+PW+ 
Sbjct: 68  TPPPSTLHHQDI--TANNNSSMASAAVGSSSSRSRNRKSPVQKLRPGKTETIPAPFPWAT 127

Query: 460 EQRASIHNLEYLQSNNIVTIKGDVRCKKCERFYEIEYNLMNKFDEIARFIERERDNMHDR 519
            +RA++H+LEYL S+N+  I G+V+CK+CE+ YEIEY+L  KF E+A FI   +  MHDR
Sbjct: 128 TRRATVHSLEYLTSHNMNKISGEVQCKRCEQKYEIEYDLHAKFMEVASFISENKYTMHDR 187

Query: 520 APICWKNPILPNCEHCREENCVEPMIPDEEDDNQFSRINWLFLLLGQLIGRLKLKQLKYF 579
           AP  W NP LPNC+ C + NCV+P++  ++       INWLFLLLG ++G  KL +LKYF
Sbjct: 188 APAIWMNPNLPNCKFCGQSNCVKPILGKKKS------INWLFLLLGHMLGCCKLSELKYF 247

Query: 580 CAHTYNHRTGAKDRLIFLTYLALCKQLQPS 606
           C HT NHRTGAKDR+++LTYL+LCKQL P+
Sbjct: 248 CKHTRNHRTGAKDRVLYLTYLSLCKQLDPN 269

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BLAST of CmoCh19G006660.1 vs. TrEMBL
Match: A0A0D2V876_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G146000 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 8.3e-49
Identity = 113/250 (45.20%), Postives = 157/250 (62.80%), Query Frame = 1


Query: 361 QSVAIPHAIEQTSSQPPTITQAIRETLNQPVAIPQTVEETPNQSTTIHQAIEQTPNQSTT 420
           Q V+ P  +E    QPP  +  ++ + N  +  P   E   + S++    +  +   S T
Sbjct: 72  QMVSQPSLMETLLYQPPP-SLPLQLSPNHSIICPSQ-ELVLSSSSSSSSPVAVSGVGSVT 131

Query: 421 IPQATNGHSTSRPRR-RRSRTRA----DTRRIEPPYPWSAEQRASIHNLEYLQSNNIVTI 480
           +P  + G   SRP R RR+ T A     +  + PPYPW+   RA++H L YL S  I TI
Sbjct: 132 VPVPSPGPGPSRPIRVRRNSTNALREGQSETVPPPYPWATSHRATVHTLNYLLSIPIPTI 191

Query: 481 KGDVRCKKCERFYEIEYNLMNKFDEIARFIERERDNMHDRAPICWKNPILPNCEHCREEN 540
            GDV+CK+CER YE+ Y+L  KF EIA +I + +++MHDRAP  W+NP+LP C+ C +EN
Sbjct: 192 TGDVQCKRCERQYEMGYDLKTKFTEIATYIAQNKESMHDRAPSVWRNPVLPKCKFCDQEN 251

Query: 541 CVEPMIPDEEDDNQFSRINWLFLLLGQLIGRLKLKQLKYFCAHTYNHRTGAKDRLIFLTY 600
             +P+I D++       INWLFLLLGQ++G   L+QLKYFC HT NHRTGAKDR+++LTY
Sbjct: 252 SAKPVISDKK-----KSINWLFLLLGQVLGCCTLEQLKYFCKHTKNHRTGAKDRVLYLTY 311

Query: 601 LALCKQLQPS 606
           L LCKQL P+
Sbjct: 312 LGLCKQLDPN 314

[Close]

BLAST of CmoCh19G006660.1 vs. TrEMBL
Match: V4RPW4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030108mg PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 2.0e-47
Identity = 123/318 (38.68%), Postives = 171/318 (53.77%), Query Frame = 1


Query: 302 TLNQLEEIPHNIRETSNQSVAILHATEETSSQPTTITRDIRETLNQLLAIPHNIRETSNQ 361
           T N   +  +N    +NQ++ + H  +E                N LLA+  ++R  S  
Sbjct: 23  TTNNSSKRINNNNNNNNQNINLDHYDQED---------------NDLLALSLSVRPASRP 82

Query: 362 SVAIPHAIEQTSSQPPTITQAI----RETLNQPVAIPQTVEETPNQSTTI-----HQAIE 421
             AIP      S  P  ++Q      R     P  +P  +  + + S  I       ++ 
Sbjct: 83  RRAIPDEETSPSPLPLQLSQPCSMQTRLVSQSPPQLPLQISPSHSHSLCIPPFMPDPSVV 142

Query: 422 QTPNQSTTIPQATNGHSTSRPRR-RRSRTRADTR----RIEPPYPWSAEQRASIHNLEYL 481
               Q    P        SRP R RR+ T+A  +     +   YPW+   RA++HNL YL
Sbjct: 143 PVYRQEIPSPAPAAAAPPSRPLRPRRNPTQAPGQGKGDTVPALYPWATTHRATVHNLNYL 202

Query: 482 QSNNIVTIKGDVRCKKCERFYEIEYNLMNKFDEIARFIERERDNMHDRAPICWKNPILPN 541
            S  I TI G+++CKKCE+ YE+ Y+L +KF E+ RFI   + +MHDRAP  W NP+LP 
Sbjct: 203 LSKQITTITGEMQCKKCEKQYEMGYDLRDKFYEVGRFIAENKSSMHDRAPSVWMNPVLPT 262

Query: 542 CEHCREENCVEPMIPDEEDDNQFSRINWLFLLLGQLIGRLKLKQLKYFCAHTYNHRTGAK 601
           C+ C +EN  +P+IPD++      +INWLFLLLGQL+G   L QLKYFC HT NHRTGAK
Sbjct: 263 CKFCDQENSAKPVIPDKK-----KQINWLFLLLGQLLGCCTLDQLKYFCKHTKNHRTGAK 320

Query: 602 DRLIFLTYLALCKQLQPS 606
           DR+++LTYL LCKQL P+
Sbjct: 323 DRVLYLTYLGLCKQLDPN 320

[Close]

BLAST of CmoCh19G006660.1 vs. TAIR10
Match: AT1G49330.1 (AT1G49330.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 169.1 bits (427), Expect = 8.8e-42
Identity = 94/227 (41.41%), Postives = 130/227 (57.27%), Query Frame = 1


Query: 390 PVAIPQTVEETPNQSTTIHQAIEQT---PNQSTTIPQATNGHSTSRPRRRRSRTRADTRR 449
           P+ +    ++TPN    +      +   P  S   P       T   R  RSR+    + 
Sbjct: 105 PLWMSNYFQQTPNPPQLVTHFFPPSGLAPPSSNLTPPPVKRPVTGSVRIYRSRSTVSKKS 164

Query: 450 --IEPPYPWSAEQRASIHNLEYLQSNNIVTIKGDVRCKKCERFYEIEYNLMNKFDEIARF 509
             I PP+PW+  +R  I +LEYL+SN I TI G+V+C+ CE+ Y++ YNL  +F E+ +F
Sbjct: 165 DTISPPFPWATNRRGEIQSLEYLESNQITTITGEVQCRHCEKVYQVSYNLRERFAEVVKF 224

Query: 510 IERERDNMHDRAPICWKNPILPNCEHCREENCVEPMIPDEEDDNQFSRINWLFLLLGQLI 569
              E+  M DRA   W  P    CE C  E  V+P+I + +     S+INWLFLLLGQ +
Sbjct: 225 YLTEKRKMRDRAHKDWAYPEQRRCELCGREKAVKPVIAERK-----SQINWLFLLLGQTL 284

Query: 570 GRLKLKQLKYFCAHTYNHRTGAKDRLIFLTYLALCKQLQP-SNRLTC 611
           G   L+QLK FC H+ NHRTGAKDR+++LTY+ LCK LQP S+  TC
Sbjct: 285 GFCTLEQLKNFCKHSKNHRTGAKDRVLYLTYMGLCKMLQPKSDLFTC 326

[Close]

BLAST of CmoCh19G006660.1 vs. TAIR10
Match: AT2G16190.1 (AT2G16190.1 BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1))

HSP 1 Score: 143.3 bits (360), Expect = 5.2e-34
Identity = 91/259 (35.14%), Postives = 135/259 (52.12%), Query Frame = 1


Query: 366 PHAIEQTSSQPPTITQAIRETLNQPVAIPQTVEET-PNQSTTIHQAIEQTPNQSTTIPQA 425
           P   + +  QP  +T     T N  +   Q +E+  P  + ++   +   P++    P  
Sbjct: 47  PQNTQPSPPQPNDMTSFANGT-NHVIVPTQALEQAVPPPNVSVRTPLPYQPSEEVLPPPQ 106

Query: 426 TNGHST---SRPRR--------RRSRTR--------ADTRRIEPPYPWSAEQRASIHNLE 485
            N  +T   + PRR        RR+  R           R I PPYPW+ ++   I +  
Sbjct: 107 LNQVATVALATPRRGRPPGGQARRNSKRPVAGVERNVGDREIVPPYPWATKKPGKIQSFR 166

Query: 486 YLQSNNIVTIKGDVRCKKCERFYEIEYNLMNKFDEIARFIERERDNMHDRAPICWKNPIL 545
            L SNNI  I G V CK C+R   +EYNL  KF E+  +I+  ++ M  RAP  W  P L
Sbjct: 167 DLSSNNINVISGQVHCKTCDRTDTVEYNLEEKFSELYGYIKVNKEEMRHRAPGSWSTPKL 226

Query: 546 PNCEHCREENCVEPMIPDEEDDNQFSRINWLFLLLGQLIGRLKLKQLKYFCAHTYNHRTG 605
             C  C+ E  ++P++ + +++     INWLFLLLGQ++G   L QL+YFC     HRTG
Sbjct: 227 IPCRTCKSE--MKPVMSERKEE-----INWLFLLLGQMLGCCTLDQLRYFCQLNSKHRTG 286

[Close]

BLAST of CmoCh19G006660.1 vs. NCBI nr
Match: gi|659077785|ref|XP_008439384.1| (PREDICTED: zinc finger protein 341-like [Cucumis melo])

HSP 1 Score: 246.1 bits (627), Expect = 1.6e-61
Identity = 128/213 (60.09%), Postives = 152/213 (71.36%), Query Frame = 1


Query: 394 PQTVEETPNQSTTIHQAIEQTPNQSTTIPQATNGHSTSRPRRRRSRTRADTRRIEPPYPW 453
           P   ++T NQ   I +   QT NQ   IP         +P+RRR  T+AD  RIEPPYPW
Sbjct: 142 PPPTQQTQNQPPEIPKPKRQTQNQPPEIP---------KPKRRR--TQADNSRIEPPYPW 201

Query: 454 SAEQRASIHNLEYLQSNNIVTIKGDVRCKKCERFYEIEYNLMNKFDEIARFIERERDNMH 513
           S E+ A IH LEYL++NNI+TIKG+V+CK+C+R  EIEY L++KFDEI RFIERE+DNMH
Sbjct: 202 STEKGAVIHKLEYLEANNILTIKGEVKCKRCDRKDEIEYELISKFDEIRRFIEREKDNMH 261

Query: 514 DRAPICWKNPILPNCEHCREENCVEPMIPDEEDDNQFSRINWLFLLLGQLIGRLKLKQLK 573
           DRAP  W NPIL NC  C +E CVEP+I +       S INWLFLLLG  +G LKL QLK
Sbjct: 262 DRAPDRWVNPILLNCNFCNKEECVEPIISEAN-----SNINWLFLLLGNFLGCLKLSQLK 321

Query: 574 YFCAHTYNHRTGAKDRLIFLTYLALCKQLQPSN 607
           YFC  T  HRTGAKDRLI+LTYLALCKQLQP++
Sbjct: 322 YFCTQTNIHRTGAKDRLIYLTYLALCKQLQPNS 338

[Close]

BLAST of CmoCh19G006660.1 vs. NCBI nr
Match: gi|778708469|ref|XP_011656206.1| (PREDICTED: uncharacterized protein LOC105435666 [Cucumis sativus])

HSP 1 Score: 236.1 bits (601), Expect = 1.7e-58
Identity = 128/228 (56.14%), Postives = 155/228 (67.98%), Query Frame = 1


Query: 386 TLNQPVAIPQTVEETPNQSTTIHQAIEQTPNQ-STTIPQ----ATNGHSTSRPRRRRSRT 445
           +L  P A P    E P  S+T+  +  Q PN+ S   PQ     +N     R R RR RT
Sbjct: 17  SLRPPSAQPPPAPEYPQLSSTLPSS--QIPNEESNATPQPNIETSNDQQQHRRRLRRRRT 76

Query: 446 RADTRRIEPPYPWSAEQRASIHNLEYLQSNNIVTIKGDVRCKKCERFYEIEYNLMNKFDE 505
           RAD  RIEPPYPW+ ++RA +H L+YLQSNNI+ IKG+V CKKCE  YEIEY+LMNK +E
Sbjct: 77  RADMTRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEMKYEIEYDLMNKVNE 136

Query: 506 IARFIERERDNMHDRAPICWKNPILPNCEHCREENCVEPMIPDEEDDNQFSRINWLFLLL 565
           I RF E E D+MHDRAP CW  P LPNC  C EE CV P+I  E+D    S+INWLFL L
Sbjct: 137 ITRFFEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDD----SKINWLFLFL 196

Query: 566 GQLIGRLKLKQLKYFCAHTYNHRTGAKDRLIFLTYLALCKQLQPSNRL 609
           GQ +G L+LKQLK+FCA +  HRTGAK+RL++L+Y AL  QLQPS  L
Sbjct: 197 GQFLGCLRLKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQPSPTL 238

[Close]

BLAST of CmoCh19G006660.1 vs. NCBI nr
Match: gi|778688498|ref|XP_011652763.1| (PREDICTED: uncharacterized protein LOC105435088 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 2.2e-58
Identity = 124/237 (52.32%), Postives = 161/237 (67.93%), Query Frame = 1


Query: 369 IEQTSSQPPTITQAIRETLNQPVAIPQTVEETPNQSTTIHQAIEQTPNQSTTIPQATNGH 428
           +  T++ PP+   ++      P  +P    + P+   T ++A E+      T     N  
Sbjct: 71  LPSTAADPPS---SLLLPSQSPDLLPPDRLQPPSTQQTQNEADEEIRPTKRT----QNEP 130

Query: 429 STSRPRRRRSRTRADTRRIEPPYPWSAEQRASIHNLEYLQSNNIVTIKGDVRCKKCERFY 488
           +   PR +R+R +ADT RIEPPYPWS EQ A IH LEYLQ+NNI TIKG+V+CK+C+R  
Sbjct: 131 NEELPRPKRTRKQADTSRIEPPYPWSTEQGAIIHKLEYLQANNIRTIKGEVKCKRCKRKD 190

Query: 489 EIEYNLMNKFDEIARFIERERDNMHDRAPICWKNPILPNCEHCREENCVEPMIPDEEDDN 548
           EIEY+LM+KF+E+ +FIERE+ NMHDRAP CW NP L NC+ C +E CVEP+IP   D  
Sbjct: 191 EIEYDLMSKFEEMIKFIEREKCNMHDRAPNCWTNPTLLNCKFCNKEKCVEPIIPAGND-- 250

Query: 549 QFSRINWLFLLLGQLIGRLKLKQLKYFCAHTYNHRTGAKDRLIFLTYLALCKQLQPS 606
             ++INWLFLLLG  +GRLKL QLK+FC  T  HRTGAKDRL++ TY  LCKQLQP+
Sbjct: 251 --NKINWLFLLLGNFLGRLKLTQLKHFCTQTKIHRTGAKDRLVYFTYFGLCKQLQPT 296

[Close]

BLAST of CmoCh19G006660.1 vs. NCBI nr
Match: gi|659126452|ref|XP_008463189.1| (PREDICTED: uncharacterized protein LOC103501397 [Cucumis melo])

HSP 1 Score: 226.5 bits (576), Expect = 1.3e-55
Identity = 114/204 (55.88%), Postives = 140/204 (68.63%), Query Frame = 1


Query: 401 PNQSTTIHQAIEQTPNQSTTIPQATNGHSTSRPRRRRSRTRADTRRIEPPYPWSAEQRAS 460
           P+Q T         PN  T+        +  + +RRR RTRAD  RIEPPYPWS ++RA 
Sbjct: 33  PSQITNEESEAITRPNNETS--------NNQQQQRRRRRTRADMTRIEPPYPWSTDRRAV 92

Query: 461 IHNLEYLQSNNIVTIKGDVRCKKCERFYEIEYNLMNKFDEIARFIERERDNMHDRAPICW 520
           +H L+YLQ NNI+TIKG+V CKKCE  YE+EY+LMNK +EI RF E E D+MHDRAP CW
Sbjct: 93  VHELKYLQVNNIMTIKGEVICKKCEMKYEMEYDLMNKVNEITRFFEEEIDSMHDRAPSCW 152

Query: 521 KNPILPNCEHCREENCVEPMIPDEEDDNQFSRINWLFLLLGQLIGRLKLKQLKYFCAHTY 580
            NP LPNC  C EE CV P+   E+     ++INWLFL LGQ +G LKL+QLKYFC  T 
Sbjct: 153 TNPNLPNCSLCNEEKCVMPVTSQED-----TKINWLFLFLGQFLGCLKLRQLKYFCTQTN 212

Query: 581 NHRTGAKDRLIFLTYLALCKQLQP 605
            HRTGAK+RL++L+Y  L +QLQP
Sbjct: 213 IHRTGAKNRLLYLSYRTLFRQLQP 223

[Close]

BLAST of CmoCh19G006660.1 vs. NCBI nr
Match: gi|568854463|ref|XP_006480845.1| (PREDICTED: uncharacterized protein LOC102624229 [Citrus sinensis])

HSP 1 Score: 210.7 bits (535), Expect = 7.5e-51
Identity = 107/210 (50.95%), Postives = 144/210 (68.57%), Query Frame = 1


Query: 400 TPNQSTTIHQAIEQTPNQSTTIPQATNGHSTSRPRRRRSRTR----ADTRRIEPPYPWSA 459
           TP  ST  HQ I  T N ++++  A  G S+SR R R+S  +      T  I  P+PW+ 
Sbjct: 68  TPPPSTLHHQDI--TANNNSSMASAAVGSSSSRSRNRKSPVQKLRPGKTETIPAPFPWAT 127

Query: 460 EQRASIHNLEYLQSNNIVTIKGDVRCKKCERFYEIEYNLMNKFDEIARFIERERDNMHDR 519
            +RA++H+LEYL S+N+  I G+V+CK+CE+ YEIEY+L  KF E+A FI   +  MHDR
Sbjct: 128 TRRATVHSLEYLTSHNMNKISGEVQCKRCEQKYEIEYDLHAKFMEVASFISENKYTMHDR 187

Query: 520 APICWKNPILPNCEHCREENCVEPMIPDEEDDNQFSRINWLFLLLGQLIGRLKLKQLKYF 579
           AP  W NP LPNC+ C + NCV+P++  ++       INWLFLLLGQ++G  KL +LKYF
Sbjct: 188 APAIWMNPNLPNCKFCGQSNCVKPILGKKKS------INWLFLLLGQMLGCCKLSELKYF 247

Query: 580 CAHTYNHRTGAKDRLIFLTYLALCKQLQPS 606
           C HT NHRTGAKDR+++LTYL+LCKQL P+
Sbjct: 248 CKHTRNHRTGAKDRVLYLTYLSLCKQLDPN 269

The following BLAST results are available for this feature:

BLAST of CmoCh19G006660.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh19G006660.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMQ2_CUCSA	1.2e-58	56.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G332030 PE=4 SV=1	[more]
A0A0A0LAK2_CUCSA	1.5e-58	52.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G153700 PE=4 SV=1	[more]
V4SNJ8_9ROSI	2.0e-50	50.48	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012452mg PE=4 SV=1	[more]
A0A0D2V876_GOSRA	8.3e-49	45.20	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G146000 PE=4 SV=1	[more]
V4RPW4_9ROSI	2.0e-47	38.68	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030108mg PE=4 SV=1	[more]

BLAST of CmoCh19G006660.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G49330.1	8.8e-42	41.41	hydroxyproline-rich glycoprotein family protein	[more]
AT2G16190.1	5.2e-34	35.14	BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glyc...	[more]

BLAST of CmoCh19G006660.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077785\|ref\|XP_008439384.1\|	1.6e-61	60.09	PREDICTED: zinc finger protein 341-like [Cucumis melo]	[more]
gi\|778708469\|ref\|XP_011656206.1\|	1.7e-58	56.14	PREDICTED: uncharacterized protein LOC105435666 [Cucumis sativus]	[more]
gi\|778688498\|ref\|XP_011652763.1\|	2.2e-58	52.32	PREDICTED: uncharacterized protein LOC105435088 [Cucumis sativus]	[more]
gi\|659126452\|ref\|XP_008463189.1\|	1.3e-55	55.88	PREDICTED: uncharacterized protein LOC103501397 [Cucumis melo]	[more]
gi\|568854463\|ref\|XP_006480845.1\|	7.5e-51	50.95	PREDICTED: uncharacterized protein LOC102624229 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh19G006660	CmoCh19G006660	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh19G006660.1	CmoCh19G006660.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh19G006660.1.CDS.4	CmoCh19G006660.1.CDS.4	CDS
CmoCh19G006660.1.CDS.3	CmoCh19G006660.1.CDS.3	CDS
CmoCh19G006660.1.CDS.2	CmoCh19G006660.1.CDS.2	CDS
CmoCh19G006660.1.CDS.1	CmoCh19G006660.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh19G006660.1.exon.4	CmoCh19G006660.1.exon.4	exon
CmoCh19G006660.1.exon.3	CmoCh19G006660.1.exon.3	exon
CmoCh19G006660.1.exon.2	CmoCh19G006660.1.exon.2	exon
CmoCh19G006660.1.exon.1	CmoCh19G006660.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34272	FAMILY NOT NAMED	coord: 265..616 score: 2.4
None	No IPR available	PANTHER	PTHR34272:SF1	F13F21.24 PROTEIN	coord: 265..616 score: 2.4