CmoCh17G012590 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G012590
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	NAC transcription factor
Location	Cmo_Chr17 : 9927651 .. 9928740 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTACGAGACGTTGGAGCAACACTTCCACCCGGGTTTAGGTTTTATCCGAGCGACGAGGAGTTAGTGTGCCATTATTTGTACAAAAAGATCACAAATGAAGAAGCTTTGAAGGGAAGTTTGATGGAGATTGACTTGCATACTTGTGAGCCATGGCATCTTCCTGGTACTTCTTTTCTCTTATCACTACTTAATCTAAATTAATTATGAACTAATTGTTTCATTAACACTTAATTTCCAACACTAATAATACACTAATTCAAACAATTATTGTATCTGTTCATAATTATTTGGATAAGGATGAAGGACAACTTTAATGGGAAAGAATTAGGATAAGAATGAAGGATGGTTTGGATAGTAATTATAAAATATGGTCTCCAATTTGAGCATAGTTCATCGATAAGATATCAATTATTAGTTACGACTGTTGTCGACCAAGTTATGAATGTTTTTGTGTGAATATGAATGCAGAGGCAGCTAAGTTGAATGGAAAGGAGTGGTATTTCTTCAGCTTTCGGGATAGAAAGTATGCAACGGGACAGAGGGCGAACCGTGCAACACTAGAAGGATACTGGAAAGCAACTGGAAAAGATAGAACGGTGATGAATCCAAAGACGGGTGAAGTTATAGGGATGAGAAAGACTTTGGTGTTTTATAGAAAAAGAGCTCCAAATGGGATCAAAACTGGTTGGATTATGCACGAGTTTCGGATTCAAACCCCTCATATGCCTCCAAAGGTTCTTATGAACGAACTATAGTTCAATTAGTTTAAGTATATATCACTGTTAAAACTGGTTTCTTTTGCTCGTACTAGGAGGACTGGGTTTTGTGTAGAGTCTTTTATAAGAGCAAGCCAGACGAGATCACCACGGGAACAACAAATATCAACCAGATGTTCGATATGGCGGCACCCGTCCCTATTTCGTCGTCGTCGTATTTAGCAAGCATCGTGCAGCTCCCATCGGCCGAGGACGGCAATGGGGTGTCATGGAAGAACATCAATAATGTAGACAAAGCAGCTGGAGGCTTTGAGATTGAAGATAGCATCCAAAATGGGTTCTTCCCTTATGAGTATATTTTTGATTGA

mRNA sequence

ATGGGATTACGAGACGTTGGAGCAACACTTCCACCCGGGTTTAGGTTTTATCCGAGCGACGAGGAGTTAGTGTGCCATTATTTGTACAAAAAGATCACAAATGAAGAAGCTTTGAAGGGAAGTTTGATGGAGATTGACTTGCATACTTGTGAGCCATGGCATCTTCCTGAGGCAGCTAAGTTGAATGGAAAGGAGTGGTATTTCTTCAGCTTTCGGGATAGAAAGTATGCAACGGGACAGAGGGCGAACCGTGCAACACTAGAAGGATACTGGAAAGCAACTGGAAAAGATAGAACGGTGATGAATCCAAAGACGGGTGAAGTTATAGGGATGAGAAAGACTTTGGTGTTTTATAGAAAAAGAGCTCCAAATGGGATCAAAACTGGTTGGATTATGCACGAGTTTCGGATTCAAACCCCTCATATGCCTCCAAAGGAGGACTGGGTTTTGTGTAGAGTCTTTTATAAGAGCAAGCCAGACGAGATCACCACGGGAACAACAAATATCAACCAGATGTTCGATATGGCGGCACCCGTCCCTATTTCGTCGTCGTCGTATTTAGCAAGCATCGTGCAGCTCCCATCGGCCGAGGACGGCAATGGGGTGTCATGGAAGAACATCAATAATGTAGACAAAGCAGCTGGAGGCTTTGAGATTGAAGATAGCATCCAAAATGGGTTCTTCCCTTATGAGTATATTTTTGATTGA

Coding sequence (CDS)

ATGGGATTACGAGACGTTGGAGCAACACTTCCACCCGGGTTTAGGTTTTATCCGAGCGACGAGGAGTTAGTGTGCCATTATTTGTACAAAAAGATCACAAATGAAGAAGCTTTGAAGGGAAGTTTGATGGAGATTGACTTGCATACTTGTGAGCCATGGCATCTTCCTGAGGCAGCTAAGTTGAATGGAAAGGAGTGGTATTTCTTCAGCTTTCGGGATAGAAAGTATGCAACGGGACAGAGGGCGAACCGTGCAACACTAGAAGGATACTGGAAAGCAACTGGAAAAGATAGAACGGTGATGAATCCAAAGACGGGTGAAGTTATAGGGATGAGAAAGACTTTGGTGTTTTATAGAAAAAGAGCTCCAAATGGGATCAAAACTGGTTGGATTATGCACGAGTTTCGGATTCAAACCCCTCATATGCCTCCAAAGGAGGACTGGGTTTTGTGTAGAGTCTTTTATAAGAGCAAGCCAGACGAGATCACCACGGGAACAACAAATATCAACCAGATGTTCGATATGGCGGCACCCGTCCCTATTTCGTCGTCGTCGTATTTAGCAAGCATCGTGCAGCTCCCATCGGCCGAGGACGGCAATGGGGTGTCATGGAAGAACATCAATAATGTAGACAAAGCAGCTGGAGGCTTTGAGATTGAAGATAGCATCCAAAATGGGTTCTTCCCTTATGAGTATATTTTTGATTGA

Homology

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BLAST of CmoCh17G012590 vs. Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 206.5 bits (524), Expect = 3.3e-52
Identity = 99/180 (55.00%), Postives = 125/180 (69.44%), Query Frame = 1


Query: 6   VGATLPPGFRFYPSDEELVCHYLYKK-ITNEEALKGSLMEIDLHTCEPWHLPEAAKLNGK 65
           V A LPPGFRF+P D+ELVC YL ++ + N       L+++DL+ CEPW +P+ A + GK
Sbjct: 15  VEAKLPPGFRFHPKDDELVCDYLMRRSLHNNHRPPLVLIQVDLNKCEPWDIPKMACVGGK 74

Query: 66  EWYFFSFRDRKYATGQRANRATLEGYWKATGKDRTVMNPKTGEVIGMRKTLVFYRKRAPN 125
           +WYF+S RDRKYATG R NRAT  GYWKATGKDRT++  + G+++GMRKTLVFY+ RAP 
Sbjct: 75  DWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTIL--RKGKLVGMRKTLVFYQGRAPR 134

Query: 126 GIKTGWIMHEFRIQTPHMP-------PKEDWVLCRVFYKSKPDEITTGTTNINQMFDMAA 178
           G KT W+MHEFR+Q  H P       PKEDWVLCRVF+K+    I     N+   FD  A
Sbjct: 135 GRKTDWVMHEFRLQGSHHPPNHSLSSPKEDWVLCRVFHKNTEGVIC--RDNMGSCFDETA 190

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BLAST of CmoCh17G012590 vs. Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.7e-48
Identity = 85/151 (56.29%), Postives = 110/151 (72.85%), Query Frame = 1


Query: 10  LPPGFRFYPSDEELVCHYLYKKITNEEALKGSLMEIDLHTCEPWHLPEAAKLNGKEWYFF 69
           LPPGFRF+P+DEEL+  YL  KI +       + E+DL+ CEPW LPE AK+  +EWYF+
Sbjct: 22  LPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMAKMGEREWYFY 81

Query: 70  SFRDRKYATGQRANRATLEGYWKATGKDRTVMNPKTGEVIGMRKTLVFYRKRAPNGIKTG 129
           S RDRKY TG R NRAT  GYWKATGKD+ V +   G+++GM+KTLVFY+ RAP G+KT 
Sbjct: 82  SLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTK 141

Query: 130 WIMHEFRIQTPHM---PPKEDWVLCRVFYKS 158
           W+MHE+R++  H      KE+WV+CRVF K+
Sbjct: 142 WVMHEYRLENDHSHRHTCKEEWVICRVFNKT 172

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BLAST of CmoCh17G012590 vs. Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 7.1e-47
Identity = 83/154 (53.90%), Postives = 109/154 (70.78%), Query Frame = 1


Query: 10  LPPGFRFYPSDEELVCHYLYKKITNEEALKGSLMEIDLHTCEPWHLPEAAKLNGKEWYFF 69
           LPPGFRF+P+DEEL+ HYL +K+ +      ++ E+DL+ CEPW LP  AK+  KEWYFF
Sbjct: 17  LPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYFF 76

Query: 70  SFRDRKYATGQRANRATLEGYWKATGKDRTVMNPKTGEVIGMRKTLVFYRKRAPNGIKTG 129
           S RDRKY TG R NRAT  GYWKATGKDR + + KT  ++GM+KTLVFY+ RAP G K+ 
Sbjct: 77  SLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSN 136

Query: 130 WIMHEFRIQTP------HMPPKEDWVLCRVFYKS 158
           W+MHE+R++            K++WV+ RVF K+
Sbjct: 137 WVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKT 170

[Close]

BLAST of CmoCh17G012590 vs. Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-46
Identity = 98/247 (39.68%), Postives = 134/247 (54.25%), Query Frame = 1


Query: 4   RDVGATLPPGFRFYPSDEELVCHYLYKKITNEEALKGSLMEIDLHTCEPWHLPEAAKLNG 63
           +D G  LPPGFRF+P+D E++  YL +K+ N       + E+DL+ CEPW LP  AK+  
Sbjct: 13  QDGGLFLPPGFRFHPTDAEVILSYLLQKLLNPSFTSLPIGEVDLNKCEPWDLPSKAKMGE 72

Query: 64  KEWYFFSFRDRKYATGQRANRATLEGYWKATGKDRTVM--------------NPKTGEVI 123
           KEWYFFS +D KY TG R NRAT EGYWKATGKDR +               + K  +++
Sbjct: 73  KEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLV 132

Query: 124 GMRKTLVFYRKRAPNGIKTGWIMHEFRIQT---PHMP-----PKEDWVLCRVFYKSKPDE 183
           GM+KTLVFY  RAP G KT W+MHEFR+      H P     PK++WV+C+VF+K + DE
Sbjct: 133 GMKKTLVFYMGRAPKGTKTNWVMHEFRLHANLHNHHPNLRLNPKDEWVVCKVFHKKQGDE 192

Query: 184 ITTGTTNINQMFDMAAPVPISSSSYLASIVQLPSAEDGNGVSWKNINNVDKAAGGFEIED 229
                  IN                 A++ Q  +    +G S     ++D     F+++D
Sbjct: 193 A------INNQ---------QQQPQYAAVDQYSAETPNSGSSVVQAGDIDGGDDFFQLDD 244

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BLAST of CmoCh17G012590 vs. Swiss-Prot
Match: NC100_ARATH (NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.1e-46
Identity = 86/154 (55.84%), Postives = 110/154 (71.43%), Query Frame = 1


Query: 10  LPPGFRFYPSDEELVCHYLYKKITNEEALKGSLMEIDLHTCEPWHLPEAAKLNGKEWYFF 69
           LPPGFRF+P+DEEL+ HYL+KK+ +      ++ E+DL+  EPW LP  AK+  KEWYFF
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYFF 75

Query: 70  SFRDRKYATGQRANRATLEGYWKATGKDRTVMNPKTGEVIGMRKTLVFYRKRAPNGIKTG 129
             RDRKY TG R NRAT  GYWKATGKD+ +   K+  ++GM+KTLVFYR RAP G KT 
Sbjct: 76  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKS--LVGMKKTLVFYRGRAPKGQKTN 135

Query: 130 WIMHEFRIQ---TPHMPP---KEDWVLCRVFYKS 158
           W+MHE+R++   + H  P   K +WV+CRVF KS
Sbjct: 136 WVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQKS 167

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BLAST of CmoCh17G012590 vs. TrEMBL
Match: A0A0A0K6U0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G353010 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 2.1e-85
Identity = 164/258 (63.57%), Postives = 189/258 (73.26%), Query Frame = 1


Query: 1   MGLRDVGATLPPGFRFYPSDEELVCHYLYKKITNEE-ALKGSLMEIDLHTCEPWHLPEAA 60
           MGL D+GA+LPPGFRFYPSDEELVC+YLYKKITNEE ALKG+L+EIDLHTCEPW LPE A
Sbjct: 1   MGLGDIGASLPPGFRFYPSDEELVCYYLYKKITNEEEALKGTLVEIDLHTCEPWQLPEVA 60

Query: 61  KLNGKEWYFFSFRDRKYATGQRANRATLEGYWKATGKDRTVMNPKT-GEVIGMRKTLVFY 120
           K+NGKEWYFFSFRDRKY  G+RANRAT+ GYWKATGKDR V+NP   GEV+GMRKTLVFY
Sbjct: 61  KVNGKEWYFFSFRDRKYGRGERANRATIHGYWKATGKDRIVINPNLGGEVMGMRKTLVFY 120

Query: 121 RKRAPNGIKTGWIMHEFRIQTPHMPPKEDWVLCRVFYKSK-PDEITTGTTNINQMFDMAA 180
           R RAP GIKT WIMHEFRIQ P  PPKEDWVLC+VF+KS+  +E T   T IN++     
Sbjct: 121 RNRAPYGIKTSWIMHEFRIQNPRFPPKEDWVLCKVFHKSRCNNETTMDITEINRV-SKTV 180

Query: 181 PVPISSSSYL--ASIVQLPSAEDGNGVSWKN---INNVDKAAGG---------------- 233
           P+  +SSS    +S +Q   A D N + WKN    NNV++  GG                
Sbjct: 181 PLASASSSLCSPSSYIQFTPAVDTNKLPWKNNIISNNVEEVGGGFKLNGVDHREYSTIQQ 240

[Close]

BLAST of CmoCh17G012590 vs. TrEMBL
Match: M5W1G4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009628mg PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.6e-82
Identity = 140/186 (75.27%), Postives = 156/186 (83.87%), Query Frame = 1


Query: 1   MGLRDVGATLPPGFRFYPSDEELVCHYLYKKITNEEALKGSLMEIDLHTCEPWHLPEAAK 60
           MGLRD+GATLPPGFRFYPSDEELVCHYL+KKITNEEALKG+L+EIDLH CEPW LPE AK
Sbjct: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLFKKITNEEALKGTLVEIDLHICEPWQLPEVAK 60

Query: 61  LNGKEWYFFSFRDRKYATGQRANRATLEGYWKATGKDRTVMNPKTGEVIGMRKTLVFYRK 120
           LN  EWYFFSFRDRKYATG R NRAT  GYWKATGKDR VM P TGE++GMRKTLVFYR 
Sbjct: 61  LNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRMVMEPGTGEIVGMRKTLVFYRN 120

Query: 121 RAPNGIKTGWIMHEFRIQTPHMPPKEDWVLCRVFYKSKPDEITTGTTNINQMFDMAAPVP 180
           RAPNGIKTGWIMHEFR++TPHMPPKEDWVLCRVF+K K +E T  + +   +   +  +P
Sbjct: 121 RAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKGKGEENTKLSPHDFMLETTSCTIP 180

Query: 181 ISSSSY 187
           +S   Y
Sbjct: 181 LSMEKY 186

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BLAST of CmoCh17G012590 vs. TrEMBL
Match: V4TZ66_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021312mg PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 3.6e-82
Identity = 142/197 (72.08%), Postives = 162/197 (82.23%), Query Frame = 1


Query: 1   MGLRDVGATLPPGFRFYPSDEELVCHYLYKKITNEEALKGSLMEIDLHTCEPWHLPEAAK 60
           MGLRD+GATLPPGFRFYPSDEELVCHYLYKKI NEE LKG+L+EIDLHTCEPW LPE AK
Sbjct: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEEVLKGTLVEIDLHTCEPWQLPEVAK 60

Query: 61  LNGKEWYFFSFRDRKYATGQRANRATLEGYWKATGKDRTVMNPKTGEVIGMRKTLVFYRK 120
           LN  EWYFFSFRDRKYATG R NRAT  GYWKATGKDRTV++P T E++GMRKTLVFYR 
Sbjct: 61  LNASEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVIDPMTRELVGMRKTLVFYRN 120

Query: 121 RAPNGIKTGWIMHEFRIQTPHMPPKEDWVLCRVFYKSKPDEITTGTTNINQMFDMAAPVP 180
           RAPNGIKTGWIMHEFR++TPHMPPKEDWVLCRVF+KSK +     + N++  F   +   
Sbjct: 121 RAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKGE----NSENLSPQFIYESAAN 180

Query: 181 ISSSSYLASIVQLPSAE 198
            ++SS+  S    P+A+
Sbjct: 181 NNASSFTPSAASPPTAD 193

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BLAST of CmoCh17G012590 vs. TrEMBL
Match: U5IJN6_GOSHI (NAC domain protein 17 OS=Gossypium hirsutum GN=NAC17 PE=2 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.1e-81
Identity = 137/164 (83.54%), Postives = 149/164 (90.85%), Query Frame = 1


Query: 1   MGLRDVGATLPPGFRFYPSDEELVCHYLYKKITNEEALKGSLMEIDLHTCEPWHLPEAAK 60
           MGLRD+GATLPPGFRFYPSDEELVCHYLYKKI NEE LKG+L+EIDLHTCEPW LPE AK
Sbjct: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEEVLKGTLVEIDLHTCEPWQLPEVAK 60

Query: 61  LNGKEWYFFSFRDRKYATGQRANRATLEGYWKATGKDRTVMNPKTGEVIGMRKTLVFYRK 120
           LN  EWYFFSFRDRKYATG R NRAT  GYWKATGKDRTV++P+T +V+GMRKTLVFYR 
Sbjct: 61  LNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDPRTEQVVGMRKTLVFYRN 120

Query: 121 RAPNGIKTGWIMHEFRIQTPHMPPKEDWVLCRVFYKSKPDEITT 165
           RAPNGIKTGWIMHEFR++TPHMPPKEDWVLCRVF+KSK  E +T
Sbjct: 121 RAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKGGENST 164

[Close]

BLAST of CmoCh17G012590 vs. TrEMBL
Match: A0A061DNM9_THECC (NAC domain protein, IPR003441 OS=Theobroma cacao GN=TCM_003998 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.4e-81
Identity = 141/192 (73.44%), Postives = 158/192 (82.29%), Query Frame = 1


Query: 1   MGLRDVGATLPPGFRFYPSDEELVCHYLYKKITNEEALKGSLMEIDLHTCEPWHLPEAAK 60
           MGLRD+GATLPPGFRFYPSDEELVCHYLYKKI NEE LKG+L+EIDLHTCEPW LPE AK
Sbjct: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKIANEEVLKGTLVEIDLHTCEPWQLPEVAK 60

Query: 61  LNGKEWYFFSFRDRKYATGQRANRATLEGYWKATGKDRTVMNPKTGEVIGMRKTLVFYRK 120
           LN  EWYFFSFRDRKYATG R NRAT  GYWKATGKDRTV++P+T EV+GMRKTLVFYR 
Sbjct: 61  LNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDPRTQEVVGMRKTLVFYRN 120

Query: 121 RAPNGIKTGWIMHEFRIQTPHMPPKEDWVLCRVFYKSKPDEITTGTTNINQMFDMAAPVP 180
           RAPNGIKTGWIMHEFR++TPHMPPKEDWVLCRVF+KSK +   +   +   MF+ +   P
Sbjct: 121 RAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKGE--NSSKLSPPMMFETSTHAP 180

Query: 181 ISSSSYLASIVQ 193
             +   +A   Q
Sbjct: 181 SLTDQTMACAYQ 190

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BLAST of CmoCh17G012590 vs. TAIR10
Match: AT4G28530.1 (AT4G28530.1 NAC domain containing protein 74)

HSP 1 Score: 267.7 bits (683), Expect = 6.8e-72
Identity = 122/178 (68.54%), Postives = 141/178 (79.21%), Query Frame = 1


Query: 1   MGLRDVGATLPPGFRFYPSDEELVCHYLYKKITN--------------EEALKGS--LME 60
           MGL+D+G+ LPPGFRF+PSDEELVCHYL  KI                +EALKGS  L+E
Sbjct: 1   MGLKDIGSKLPPGFRFHPSDEELVCHYLCNKIRAKSDHGDVDDDDDDVDEALKGSTDLVE 60

Query: 61  IDLHTCEPWHLPEAAKLNGKEWYFFSFRDRKYATGQRANRATLEGYWKATGKDRTVMNPK 120
           IDLH CEPW LP+ AKLN KEWYFFSFRDRKYATG R NRAT+ GYWKATGKDRTVM+P+
Sbjct: 61  IDLHICEPWELPDVAKLNAKEWYFFSFRDRKYATGYRTNRATVSGYWKATGKDRTVMDPR 120

Query: 121 TGEVIGMRKTLVFYRKRAPNGIKTGWIMHEFRIQTPHMPPKEDWVLCRVFYKSKPDEI 163
           T +++GMRKTLVFYR RAPNGIKT WIMHEFR++ P++PPKEDWVLCRVF K +   +
Sbjct: 121 TRQLVGMRKTLVFYRNRAPNGIKTTWIMHEFRLECPNIPPKEDWVLCRVFNKGRDSSL 178

[Close]

BLAST of CmoCh17G012590 vs. TAIR10
Match: AT1G56010.2 (AT1G56010.2 NAC domain containing protein 1)

HSP 1 Score: 206.5 bits (524), Expect = 1.9e-53
Identity = 99/180 (55.00%), Postives = 125/180 (69.44%), Query Frame = 1


Query: 6   VGATLPPGFRFYPSDEELVCHYLYKK-ITNEEALKGSLMEIDLHTCEPWHLPEAAKLNGK 65
           V A LPPGFRF+P D+ELVC YL ++ + N       L+++DL+ CEPW +P+ A + GK
Sbjct: 15  VEAKLPPGFRFHPKDDELVCDYLMRRSLHNNHRPPLVLIQVDLNKCEPWDIPKMACVGGK 74

Query: 66  EWYFFSFRDRKYATGQRANRATLEGYWKATGKDRTVMNPKTGEVIGMRKTLVFYRKRAPN 125
           +WYF+S RDRKYATG R NRAT  GYWKATGKDRT++  + G+++GMRKTLVFY+ RAP 
Sbjct: 75  DWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTIL--RKGKLVGMRKTLVFYQGRAPR 134

Query: 126 GIKTGWIMHEFRIQTPHMP-------PKEDWVLCRVFYKSKPDEITTGTTNINQMFDMAA 178
           G KT W+MHEFR+Q  H P       PKEDWVLCRVF+K+    I     N+   FD  A
Sbjct: 135 GRKTDWVMHEFRLQGSHHPPNHSLSSPKEDWVLCRVFHKNTEGVIC--RDNMGSCFDETA 190

[Close]

BLAST of CmoCh17G012590 vs. TAIR10
Match: AT2G24430.1 (AT2G24430.1 NAC domain containing protein 38)

HSP 1 Score: 197.6 bits (501), Expect = 8.6e-51
Identity = 92/195 (47.18%), Postives = 131/195 (67.18%), Query Frame = 1


Query: 10  LPPGFRFYPSDEELVCHYLYKKITNEEALKGSLMEIDLHTCEPWHLPEAAKLNGKEWYFF 69
           LPPGFRF+P+DEEL+ +YL  KI ++     ++ ++DL+  EPW LPE AK+ GKEWYFF
Sbjct: 16  LPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDLNKSEPWELPEKAKMGGKEWYFF 75

Query: 70  SFRDRKYATGQRANRATLEGYWKATGKDRTVMNPKTGEVIGMRKTLVFYRKRAPNGIKTG 129
           S RDRKY TG R NRAT  GYWK TGKD+ + N  T E++GM+KTLVFYR RAP G KT 
Sbjct: 76  SLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAPRGEKTC 135

Query: 130 WIMHEFRIQTP---HMPPKEDWVLCRVFYKSKPDE--ITTGTTNINQMFDMAAPVPISSS 189
           W+MHE+R+ +        +++WV+CRVF K++  +  I+T +++ +   +      I S+
Sbjct: 136 WVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKKYISTSSSSTSHHHNNHTRASILST 195

Query: 190 -----SYLASIVQLP 195
                +Y + ++QLP
Sbjct: 196 NNNNPNYSSDLLQLP 210

[Close]

BLAST of CmoCh17G012590 vs. TAIR10
Match: AT3G12977.1 (AT3G12977.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 196.8 bits (499), Expect = 1.5e-50
Identity = 89/157 (56.69%), Postives = 114/157 (72.61%), Query Frame = 1


Query: 6   VGATLPPGFRFYPSDEELVCHYLYKKITNEEALKGSLMEIDLHTCEPWHLPEAAKLNGKE 65
           V A LPPGFRF+P D+ELVC YL ++          L+++DL+ CEPW +P+ A++ GKE
Sbjct: 14  VEANLPPGFRFHPRDDELVCDYLMRRTVRSLYQPVVLIDVDLNKCEPWDIPQTARVGGKE 73

Query: 66  WYFFSFRDRKYATGQRANRATLEGYWKATGKDRTVMNPKTGEVIGMRKTLVFYRKRAPNG 125
           WYF+S +DRKYATG R NRAT  GYWKATGKDR +   + G ++GMRKTLVFYR R+P G
Sbjct: 74  WYFYSQKDRKYATGYRTNRATATGYWKATGKDRAIQ--RNGGLVGMRKTLVFYRGRSPKG 133

Query: 126 IKTGWIMHEFRIQ---TPHMPP--KEDWVLCRVFYKS 158
            KT W+MHEFR+Q     H P   +E+WVLCRVF+K+
Sbjct: 134 RKTDWVMHEFRLQGKLLHHSPNSLEEEWVLCRVFHKN 168

[Close]

BLAST of CmoCh17G012590 vs. TAIR10
Match: AT1G76420.1 (AT1G76420.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 194.1 bits (492), Expect = 9.5e-50
Identity = 85/151 (56.29%), Postives = 110/151 (72.85%), Query Frame = 1


Query: 10  LPPGFRFYPSDEELVCHYLYKKITNEEALKGSLMEIDLHTCEPWHLPEAAKLNGKEWYFF 69
           LPPGFRF+P+DEEL+  YL  KI +       + E+DL+ CEPW LPE AK+  +EWYF+
Sbjct: 22  LPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMAKMGEREWYFY 81

Query: 70  SFRDRKYATGQRANRATLEGYWKATGKDRTVMNPKTGEVIGMRKTLVFYRKRAPNGIKTG 129
           S RDRKY TG R NRAT  GYWKATGKD+ V +   G+++GM+KTLVFY+ RAP G+KT 
Sbjct: 82  SLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTK 141

Query: 130 WIMHEFRIQTPHM---PPKEDWVLCRVFYKS 158
           W+MHE+R++  H      KE+WV+CRVF K+
Sbjct: 142 WVMHEYRLENDHSHRHTCKEEWVICRVFNKT 172

[Close]

BLAST of CmoCh17G012590 vs. NCBI nr
Match: gi|778727061|ref|XP_011659202.1| (PREDICTED: NAC domain-containing protein 21/22-like [Cucumis sativus])

HSP 1 Score: 323.6 bits (828), Expect = 3.0e-85
Identity = 164/258 (63.57%), Postives = 189/258 (73.26%), Query Frame = 1


Query: 1   MGLRDVGATLPPGFRFYPSDEELVCHYLYKKITNEE-ALKGSLMEIDLHTCEPWHLPEAA 60
           MGL D+GA+LPPGFRFYPSDEELVC+YLYKKITNEE ALKG+L+EIDLHTCEPW LPE A
Sbjct: 1   MGLGDIGASLPPGFRFYPSDEELVCYYLYKKITNEEEALKGTLVEIDLHTCEPWQLPEVA 60

Query: 61  KLNGKEWYFFSFRDRKYATGQRANRATLEGYWKATGKDRTVMNPKT-GEVIGMRKTLVFY 120
           K+NGKEWYFFSFRDRKY  G+RANRAT+ GYWKATGKDR V+NP   GEV+GMRKTLVFY
Sbjct: 61  KVNGKEWYFFSFRDRKYGRGERANRATIHGYWKATGKDRIVINPNLGGEVMGMRKTLVFY 120

Query: 121 RKRAPNGIKTGWIMHEFRIQTPHMPPKEDWVLCRVFYKSK-PDEITTGTTNINQMFDMAA 180
           R RAP GIKT WIMHEFRIQ P  PPKEDWVLC+VF+KS+  +E T   T IN++     
Sbjct: 121 RNRAPYGIKTSWIMHEFRIQNPRFPPKEDWVLCKVFHKSRCNNETTMDITEINRV-SKTV 180

Query: 181 PVPISSSSYL--ASIVQLPSAEDGNGVSWKN---INNVDKAAGG---------------- 233
           P+  +SSS    +S +Q   A D N + WKN    NNV++  GG                
Sbjct: 181 PLASASSSLCSPSSYIQFTPAVDTNKLPWKNNIISNNVEEVGGGFKLNGVDHREYSTIQQ 240

[Close]

BLAST of CmoCh17G012590 vs. NCBI nr
Match: gi|659116504|ref|XP_008458103.1| (PREDICTED: NAC domain-containing protein 21/22-like [Cucumis melo])

HSP 1 Score: 319.3 bits (817), Expect = 5.6e-84
Identity = 157/251 (62.55%), Postives = 184/251 (73.31%), Query Frame = 1


Query: 1   MGLRDVGATLPPGFRFYPSDEELVCHYLYKKITNEEALKGSLMEIDLHTCEPWHLPEAAK 60
           MGLRD+GA+LPPGFRFYPSDEELVCHYLYKKI NEEAL+G+L+EIDLHTCEPW LPE AK
Sbjct: 1   MGLRDIGASLPPGFRFYPSDEELVCHYLYKKIGNEEALRGTLVEIDLHTCEPWQLPEVAK 60

Query: 61  LNGKEWYFFSFRDRKYATGQRANRATLEGYWKATGKDRTVMNPKTGEVIGMRKTLVFYRK 120
           LNG EWYFFSFRDRKY+TG R NRAT  GYWKATGKDR VM+P   E++GMRKTLVFYR 
Sbjct: 61  LNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRMVMDPTKKEIVGMRKTLVFYRN 120

Query: 121 RAPNGIKTGWIMHEFRIQTPHMPPKEDWVLCRVFYKSKPDEITTGTT---NINQMFDMAA 180
           RAPNGIKTGWIMHEFRI+TPHMPPKEDWVLCRVF+K+K D+ TT TT   +    F   A
Sbjct: 121 RAPNGIKTGWIMHEFRIETPHMPPKEDWVLCRVFHKTKSDQDTTETTTTKHTTSHFTFDA 180

Query: 181 PVPISSSSY-LASIVQLPSAEDGNGVSWKNINNVDKAAGGFE---------------IED 233
            +  SSS Y L + V+   + + NG+   +IN  + +  G                 I++
Sbjct: 181 MMAESSSYYLLPNNVEFLPSYNSNGLLPLDINLEETSFNGSSYGVGDSNSEEMKYEIIDN 240

[Close]

BLAST of CmoCh17G012590 vs. NCBI nr
Match: gi|694416002|ref|XP_009336141.1| (PREDICTED: NAC domain-containing protein 21/22-like [Pyrus x bretschneideri])

HSP 1 Score: 317.8 bits (813), Expect = 1.6e-83
Identity = 156/255 (61.18%), Postives = 175/255 (68.63%), Query Frame = 1


Query: 1   MGLRDVGATLPPGFRFYPSDEELVCHYLYKKITNEEALKGSLMEIDLHTCEPWHLPEAAK 60
           MGLRD+GATLPPGFRFYPSDEELVCHYLYKKITNEEALKG+L+EIDLH CEPW LPE AK
Sbjct: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKITNEEALKGTLVEIDLHICEPWQLPEVAK 60

Query: 61  LNGKEWYFFSFRDRKYATGQRANRATLEGYWKATGKDRTVMNPKTGEVIGMRKTLVFYRK 120
           LN  EWYFFSFRDRKYATG R NRAT  GYWKATGKDR VM P TG+++GMRKTLVFYR 
Sbjct: 61  LNANEWYFFSFRDRKYATGFRTNRATSTGYWKATGKDRLVMEPGTGDIVGMRKTLVFYRN 120

Query: 121 RAPNGIKTGWIMHEFRIQTPHMPPKEDWVLCRVFYKSK---------PDEITTGTTNINQ 180
           RAPNGIKTGWIMHEFR++TPHMPPKEDWVLCRVFYK K         P + T  TT    
Sbjct: 121 RAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFYKGKAAENSTKLNPHDFTLETTPCTV 180

Query: 181 MFDMAAPVPI-------------SSSSYLASIVQLPSAEDGNGVSWKNINNVDKAAGGF- 230
             ++  P P              + S+   +++QLP  E     S   +N  +    GF 
Sbjct: 181 PLNLVPPPPTYDQTMPCVYNQNHNQSNAFLNLLQLPHQEKYTNSSVSELNMKNDDEYGFL 240

[Close]

BLAST of CmoCh17G012590 vs. NCBI nr
Match: gi|1009147147|ref|XP_015891257.1| (PREDICTED: NAC domain-containing protein 21/22-like [Ziziphus jujuba])

HSP 1 Score: 314.3 bits (804), Expect = 1.8e-82
Identity = 138/161 (85.71%), Postives = 148/161 (91.93%), Query Frame = 1


Query: 1   MGLRDVGATLPPGFRFYPSDEELVCHYLYKKITNEEALKGSLMEIDLHTCEPWHLPEAAK 60
           MGLRD+GATLPPGFRFYPSDEELVCHYLYKKITNEE LKG+L+EIDLHTCEPW LPE AK
Sbjct: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLYKKITNEEVLKGTLVEIDLHTCEPWQLPEVAK 60

Query: 61  LNGKEWYFFSFRDRKYATGQRANRATLEGYWKATGKDRTVMNPKTGEVIGMRKTLVFYRK 120
           LN  EWYFFSFRDRKYATG R NRAT  GYWKATGKDRTV++P T E+IGMRKTLVFYR 
Sbjct: 61  LNASEWYFFSFRDRKYATGYRTNRATTTGYWKATGKDRTVLDPVTREIIGMRKTLVFYRN 120

Query: 121 RAPNGIKTGWIMHEFRIQTPHMPPKEDWVLCRVFYKSKPDE 162
           RAPNGIKTGWIMHEFR++TPHMPPKEDWVLCRVF+KSK D+
Sbjct: 121 RAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKADD 161

[Close]

BLAST of CmoCh17G012590 vs. NCBI nr
Match: gi|595801718|ref|XP_007201869.1| (hypothetical protein PRUPE_ppa009628mg [Prunus persica])

HSP 1 Score: 313.9 bits (803), Expect = 2.3e-82
Identity = 140/186 (75.27%), Postives = 156/186 (83.87%), Query Frame = 1


Query: 1   MGLRDVGATLPPGFRFYPSDEELVCHYLYKKITNEEALKGSLMEIDLHTCEPWHLPEAAK 60
           MGLRD+GATLPPGFRFYPSDEELVCHYL+KKITNEEALKG+L+EIDLH CEPW LPE AK
Sbjct: 1   MGLRDIGATLPPGFRFYPSDEELVCHYLFKKITNEEALKGTLVEIDLHICEPWQLPEVAK 60

Query: 61  LNGKEWYFFSFRDRKYATGQRANRATLEGYWKATGKDRTVMNPKTGEVIGMRKTLVFYRK 120
           LN  EWYFFSFRDRKYATG R NRAT  GYWKATGKDR VM P TGE++GMRKTLVFYR 
Sbjct: 61  LNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRMVMEPGTGEIVGMRKTLVFYRN 120

Query: 121 RAPNGIKTGWIMHEFRIQTPHMPPKEDWVLCRVFYKSKPDEITTGTTNINQMFDMAAPVP 180
           RAPNGIKTGWIMHEFR++TPHMPPKEDWVLCRVF+K K +E T  + +   +   +  +P
Sbjct: 121 RAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKGKGEENTKLSPHDFMLETTSCTIP 180

Query: 181 ISSSSY 187
           +S   Y
Sbjct: 181 LSMEKY 186

The following BLAST results are available for this feature:

BLAST of CmoCh17G012590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NAC22_ARATH	3.3e-52	55.00	NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2	[more]
NAC31_ARATH	1.7e-48	56.29	Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1	[more]
NAC98_ARATH	7.1e-47	53.90	Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1	[more]
NAC77_ORYSJ	1.2e-46	39.68	NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 S...	[more]
NC100_ARATH	2.1e-46	55.84	NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1	[more]

BLAST of CmoCh17G012590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6U0_CUCSA	2.1e-85	63.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G353010 PE=4 SV=1	[more]
M5W1G4_PRUPE	1.6e-82	75.27	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009628mg PE=4 SV=1	[more]
V4TZ66_9ROSI	3.6e-82	72.08	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021312mg PE=4 SV=1	[more]
U5IJN6_GOSHI	1.1e-81	83.54	NAC domain protein 17 OS=Gossypium hirsutum GN=NAC17 PE=2 SV=1	[more]
A0A061DNM9_THECC	1.4e-81	73.44	NAC domain protein, IPR003441 OS=Theobroma cacao GN=TCM_003998 PE=4 SV=1	[more]

BLAST of CmoCh17G012590 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28530.1	6.8e-72	68.54	NAC domain containing protein 74	[more]
AT1G56010.2	1.9e-53	55.00	NAC domain containing protein 1	[more]
AT2G24430.1	8.6e-51	47.18	NAC domain containing protein 38	[more]
AT3G12977.1	1.5e-50	56.69	NAC (No Apical Meristem) domain transcriptional regulator superfamil...	[more]
AT1G76420.1	9.5e-50	56.29	NAC (No Apical Meristem) domain transcriptional regulator superfamil...	[more]

BLAST of CmoCh17G012590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778727061\|ref\|XP_011659202.1\|	3.0e-85	63.57	PREDICTED: NAC domain-containing protein 21/22-like [Cucumis sativus]	[more]
gi\|659116504\|ref\|XP_008458103.1\|	5.6e-84	62.55	PREDICTED: NAC domain-containing protein 21/22-like [Cucumis melo]	[more]
gi\|694416002\|ref\|XP_009336141.1\|	1.6e-83	61.18	PREDICTED: NAC domain-containing protein 21/22-like [Pyrus x bretschneideri]	[more]
gi\|1009147147\|ref\|XP_015891257.1\|	1.8e-82	85.71	PREDICTED: NAC domain-containing protein 21/22-like [Ziziphus jujuba]	[more]
gi\|595801718\|ref\|XP_007201869.1\|	2.3e-82	75.27	hypothetical protein PRUPE_ppa009628mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003441	NAC-dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G012590.1	CmoCh17G012590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 11..137 score: 2.2
IPR003441	NAC domain	PROFILE	PS51005	NAC	coord: 10..156 score: 5
IPR003441	NAC domain	unknown	SSF101941	NAC domain	coord: 8..156 score: 6.8
None	No IPR available	PANTHER	PTHR31744	FAMILY NOT NAMED	coord: 1..197 score: 3.0E
None	No IPR available	PANTHER	PTHR31744:SF4	SUBFAMILY NOT NAMED	coord: 1..197 score: 3.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G012590	Cucsa.077940	Cucumber (Gy14) v1	cgycmoB0134
CmoCh17G012590	CmaCh17G012890	Cucurbita maxima (Rimu)	cmacmoB353
CmoCh17G012590	Cla014910	Watermelon (97103) v1	cmowmB325
CmoCh17G012590	Csa7G353010	Cucumber (Chinese Long) v2	cmocuB374
CmoCh17G012590	ClCG09G008570	Watermelon (Charleston Gray)	cmowcgB302
CmoCh17G012590	CSPI07G14690	Wild cucumber (PI 183967)	cmocpiB377
CmoCh17G012590	Lsi02G021250	Bottle gourd (USVL1VR-Ls)	cmolsiB334
CmoCh17G012590	Cp4.1LG12g10990	Cucurbita pepo (Zucchini)	cmocpeB335
CmoCh17G012590	CsaV3_7G026420	Cucumber (Chinese Long) v3	cmocucB0450
CmoCh17G012590	Cla97C09G171340	Watermelon (97103) v2	cmowmbB373
CmoCh17G012590	Bhi09G001077	Wax gourd	cmowgoB0492
CmoCh17G012590	CsGy7G013180	Cucumber (Gy14) v2	cgybcmoB903
CmoCh17G012590	Carg11468	Silver-seed gourd	carcmoB0021

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G012590	Cucurbita pepo (Zucchini)	cmocpeB343
CmoCh17G012590	Melon (DHL92) v3.6.1	cmomedB360
CmoCh17G012590	Silver-seed gourd	carcmoB0112
CmoCh17G012590	Cucurbita moschata (Rifu)	cmocmoB311
CmoCh17G012590	Cucurbita maxima (Rimu)	cmacmoB888
CmoCh17G012590	Melon (DHL92) v3.5.1	cmomeB314