CmoCh14G020580 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGATTCTGGGGTGCTGGGTGTCACAATCGCATCGCACTTCGAGCATGACCGTGACACTGGGCTGGATGTGTTTGAGAATGAACCCGAAATTCCGAAACAGCTCTTTAAACTAGATAATGGTGCTATCATAACACATGAATCTTTTGTGGGAATGTCTAAGTTGGTGGTGGAAAACATGGAGGCACTCTTCTCAAACAAACCTCTGGTGTCTCCCTTCATGGATTAG ATGTTTGATTCTGGGGTGCTGGGTGTCACAATCGCATCGCACTTCGAGCATGACCGTGACACTGGGCTGGATGTGTTTGAGAATGAACCCGAAATTCCGAAACAGCTCTTTAAACTAGATAATGGTGCTATCATAACACATGAATCTTTTGTGGGAATGTCTAAGTTGGTGGTGGAAAACATGGAGGCACTCTTCTCAAACAAACCTCTGGTGTCTCCCTTCATGGATTAG ATGTTTGATTCTGGGGTGCTGGGTGTCACAATCGCATCGCACTTCGAGCATGACCGTGACACTGGGCTGGATGTGTTTGAGAATGAACCCGAAATTCCGAAACAGCTCTTTAAACTAGATAATGGTGCTATCATAACACATGAATCTTTTGTGGGAATGTCTAAGTTGGTGGTGGAAAACATGGAGGCACTCTTCTCAAACAAACCTCTGGTGTCTCCCTTCATGGATTAG
BLAST of CmoCh14G020580 vs. Swiss-Prot
Match: HPPR_PLESU (Hydroxyphenylpyruvate reductase OS=Plectranthus scutellarioides GN=HPPR PE=1 SV=2) HSP 1 Score: 56.2 bits (134), Expect = 1.8e-07 Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 1
BLAST of CmoCh14G020580 vs. Swiss-Prot
Match: HPR3_ARATH (Glyoxylate/hydroxypyruvate reductase HPR3 OS=Arabidopsis thaliana GN=HPR3 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 2.3e-07 Identity = 27/58 (46.55%), Postives = 40/58 (68.97%), Query Frame = 1
BLAST of CmoCh14G020580 vs. TrEMBL
Match: A0A0A0L908_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124900 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 2.6e-13 Identity = 41/60 (68.33%), Postives = 48/60 (80.00%), Query Frame = 1
BLAST of CmoCh14G020580 vs. TrEMBL
Match: A0A0A0L4C2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124920 PE=3 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 3.7e-12 Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 1
BLAST of CmoCh14G020580 vs. TrEMBL
Match: A0A0A0L7K6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124910 PE=3 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.1e-11 Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = 1
BLAST of CmoCh14G020580 vs. TrEMBL
Match: B9IC39_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s06940g PE=3 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 2.0e-10 Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 1
BLAST of CmoCh14G020580 vs. TrEMBL
Match: A0A067H4Q9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020160mg PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.3e-09 Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 1
BLAST of CmoCh14G020580 vs. TAIR10
Match: AT2G45630.2 (AT2G45630.2 D-isomer specific 2-hydroxyacid dehydrogenase family protein) HSP 1 Score: 63.2 bits (152), Expect = 8.2e-11 Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 1
BLAST of CmoCh14G020580 vs. TAIR10
Match: AT1G12550.1 (AT1G12550.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein) HSP 1 Score: 55.8 bits (133), Expect = 1.3e-08 Identity = 27/58 (46.55%), Postives = 40/58 (68.97%), Query Frame = 1
BLAST of CmoCh14G020580 vs. TAIR10
Match: AT1G79870.1 (AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein) HSP 1 Score: 50.1 bits (118), Expect = 7.2e-07 Identity = 26/57 (45.61%), Postives = 37/57 (64.91%), Query Frame = 1
BLAST of CmoCh14G020580 vs. NCBI nr
Match: gi|659077733|ref|XP_008439355.1| (PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Cucumis melo]) HSP 1 Score: 84.0 bits (206), Expect = 1.3e-13 Identity = 43/60 (71.67%), Postives = 47/60 (78.33%), Query Frame = 1
BLAST of CmoCh14G020580 vs. NCBI nr
Match: gi|659075382|ref|XP_008438113.1| (PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Cucumis melo]) HSP 1 Score: 83.2 bits (204), Expect = 2.2e-13 Identity = 40/59 (67.80%), Postives = 49/59 (83.05%), Query Frame = 1
BLAST of CmoCh14G020580 vs. NCBI nr
Match: gi|449433109|ref|XP_004134340.1| (PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3 [Cucumis sativus]) HSP 1 Score: 82.4 bits (202), Expect = 3.7e-13 Identity = 41/60 (68.33%), Postives = 48/60 (80.00%), Query Frame = 1
BLAST of CmoCh14G020580 vs. NCBI nr
Match: gi|778677348|ref|XP_004133892.2| (PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Cucumis sativus]) HSP 1 Score: 80.9 bits (198), Expect = 1.1e-12 Identity = 39/59 (66.10%), Postives = 48/59 (81.36%), Query Frame = 1
BLAST of CmoCh14G020580 vs. NCBI nr
Match: gi|659075398|ref|XP_008438122.1| (PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Cucumis melo]) HSP 1 Score: 79.7 bits (195), Expect = 2.4e-12 Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |