CmoCh05G006640 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh05G006640
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCmo_Chr05 : 3365348 .. 3370509 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAAAATTCAAAAAATGTGACGTGAAAAACGAATCGAAGAAAGGAGGAGACTGCAGTCTGCTGGAGGGACGGCGGAGCACAGCCAGCTATAAGAAACTCGCCGCGGCTGTTGATTTCACCGGCGTCGTCGAAACTTTGGGCCTTCTATATTGCATAGATTGTTATTTGATTTCGAATTACGAAGTGAAATCCAGAGTAGAATATTCGGCTATCTCGATGATGTTCGCGGCGGTGAGTTATCCTCTACCATTCCTTTATCTTACATTTCTTTGCTCAGAATTTTTCGTATATGGTGTTCACATGTTTATTTTGGTGGTTCAGTTTGCAAGCGAATCGCCTCCGTCTCACATTTCTGTGCTTGGATTCCTGAACGGAGCCCTTAACTTTTTCAAGCGCGATATTTCTCGGATGTTCGCCGTCTTTAACGGCCTATCTAACATTGATGCAGTGGCGAGGTAAAACGACTACATATTTCGATCCTTTGGTTTGCTCCGTCTGAAATGAGTGCGACACTTCATCGACTTTACAGTAATTAATTGACCTTTTGTATGTTAACATTAAGAAATTGAAAGAATTTTAATGAATTTCTTTATGCTTTCTGATTATATACATTACATGCGAAGGCCCGACGAGGATGAGGATTCATTACAGCCTGCTATTAAAAGTTTGATGACAACTGACGGTGACCATTGCGAGTTGAGATTCTCGGCTTGTTTTTCAGAAAAGCGTAATTTTGATGGCGAAAGTGATCCGCAGGCTGTTTTCAACGTGTTGGACGCTCTGCTCAGGGGTAGTTTGGATCGTTTGAAGGCCATGAGGTGATTTTTTCTTTTCGTTAATTATATTTGCTTTCACCCTTATAGTTCGAAATCTCAATACGTGATGATCTCTTCATCAATGTGGACGTGCATAGATGAAAGCCATCCTGCTTATTTAATGAATAATACCTTACTAGGTAAATCTTATTATTTCCTTTTATAAGAAACAATTTCATTGATGTATGAAATTACAAAAAGGATAGATAATCGAGGGTGATTCCAAAAAGCTTGCAATTTGTCAATAGAGTAGCATAACTATAAGAAGAAAAGATATTTGTAGATTTACACTAAGAGATGGCATGATAAACAATGGAATCAAAGAACTTGTCAAAAGGAAGCTCTTTATCCAATAAGCTCTCATTCTTTCTAACGATTCCAAAGAAAATCCCTGATGGTGGATTTTCACAACACAGCTTTAGCTTCCTTGAAAGGATGATCGGACAAAACTATGGAAAGAAAAGTCTTGATGTCCCAAGGAAGGGTCAGGTGCCAGCCAAAAGGAGAACAAATTTCATTTCAAAATTTCTGAGCATATGGGTAAACCTTGTTTAATGCATGGAATCGTTATATCCTTAAAAGATCGTGATAACTATAAAATTTTACTTGCGCTGACTGCAGATAATTTCGATGAGCCTATTTATTCTTAAGTAGCTGTTGGATATATTCTGTGTTAAATGATTAGCAGATGCTATAATTCATGCTATAGCTCACATTTCCTGGGCACAAACCACTGTGTTCTTGGAGAATAAAGGTACTTATGTGAGCTTAGAATCACCTGAGTCTGCTATAGTTAGTTGTAAGTGAACTTTGCTATCGAGCTATAATTCTCACCATCAATTAAAGGTTTGGCGAGAGAGAAGGGACACGAAAAATAAGAGTGTTGGGGGGCATTGCCTCAGTAAGGTTTTAGGGAATTTGTGGGAACTAGTGTAAAACTTGGAGTTCTGAAGCTTCTGATCTTTTTACTAAAAACTGGGATTCCTCCGCGTTTCTTCATTAAGACATCAATGAGTCCTTTCACATCCATCTTTATATTCACTCAAATTAAGTTGATGTACTTCTCCTGCATAGCCCCTTATTGCTTCTTTAGAGTTGAATATTCATTGAGTGCAGTGACTTATGATTGTTGATGTACTATTATTCCTAGTTGTGATGAGGATAAGAAAATTAAAAAATTGGACGGCTGATTTCGTTTATTCTTCTTTTCATCTCCCAATTGTTTTTATGCTATTAAATATATCTAATGATCTTATATGCCTTATATGTTTACAAGGTATCATCTTGTAAAAATCTGTTAAATGCCTAAATTTTTTCAGGGAAAGCATATGTTTAGCAAAGTCAGGTCTTCAGAAATGTCTTTGGGAGGCCGTTCAGCAACCTGACTACACTGCCATGGTTAGGGATTTGTGTTTAAAAGGAAAATTAGGAGCAGCTCTTTTGCTTCGGAGAAAGTTGATAAGACAAGGTTTTGTTGTTGATTTACTCACACACAATTATCTTCTTAATGGACTGTGTATAAACTGTGATATGGAGATAGCAGATTCTCTTTTTAGGGAAATGTTAGAAAGTGGTCCTTCTCCCAGTTGTGCCACATACAACATTATTATTAAGGGTTTCTGCCTTCATAGGAATATGGATAAAGCTCTCGACTTATTTTATACCATGGCTAATAATGGTATTAAGCCAAGTAGAATTACCTATAACATACTTTTACATGCATTGTGCAAGAGAGGCATCCTGGAGGATGCTCGGAAGCTTCTTGAAGATATCCTTGATGATGATATTAAAACAACAGATGATGCAATCACATCAACTATATTAATGGATGGTTTTTTTAAAGGTGGAGATATGGTTCAGGCTATTTCTTTATGGTCTGAGATGGTGGAAAAGAAGACAGAGATTGATGTCGTTGCATACAACGTCCTTATTCACGGGCTTTGTTTGAATCAAGATAAGAAAATTGCATTTGGCTGTGTTGTTGATATGATCAAGAGGGGTTTTATTCCCGATATCTTTACATACAACACTCTAATCAGTGATCTTTGTAAAGAGGGCCAATTTGATGAGGTTTACTATATACATGATGTCATGTCACGAATGGGTGTTTCTCCAGATCATATTTCATACAAAATGATTATTCAAGGTCTATGTATTCATGGAGATGCTATCAAAGCTAATGAGTTTCTTCATTCAATGTTAGAGAAATCGATGGTGCCTGAGCCTCGTATCTGGAACCTGATAATCGATTGTTATGGAAGGTATGGAGATCTGAGCAATGCAATCTCCATCAGGGATCAGATGTTGGCCACCGGCGTGCTACCAAATGTATTTACTTACAATGCATTGATTCACGCACAAGTTAAAGGAGGGAACATATTCAATGCTTATTCTCTGAAAAAGGATATGCTTTTGTTAGGTCATTTTCCAGACGTTGTTACTTATAATTTATTGATAAGTGGTGCCTGTAAGTGTGGACAAATTCGTTCTGCCCTTCAATTATATGATGAAATGCTGAGGAAGGGGTACGAACCAGATAAGATAACCTACACAGAACTAATAAGAGGTCACTGTATATGTGGTGACATGAAGGAGGCAGAAGATCTATTTATGAAGTTACACAGATCTGGGTTGCCAATGGATATTGTCCCATTTAAAATTATTTTTGAGAAGTACCATAGAATAGGAGAGTCTGAAATGGCATTTAAATTTTATCAAAGGTGGTTGACAATGATGGCATGAGTAGCTGTTTAACAAAATAAATTGTTCGAGGTTACAGCACTAATGTTGCCATTGTGGCTCACAATCATAAGAGATCTGTGACATCCCACGTCGGTTGGAGAGAGGAACGAAACATTCTTTATAATGGTGTAGAAACCTCTCCCTAGTAGACATGAGGGGAAGCCCGAATGGAAAGGTCCATTAAGGACAATATCTGCTAGCGGTGGGCTTGGGTTGTTACAGACGGGCGGCGTACAGATGTCTTTTACTGACCTAAGTATAATTCAGCCTTCTGTTTGTGGACATTTCTGATGGGTAATGTGCTCCTCCTTAGAGGTATGTGTCCATGCTTATGCTTTATCCACTATTTCTTAATCAGTTGTTGTCTTTTCACTGTGCATAACATTCTCATGATTCCAATATTCGTTCACAGCTGAATATCAAAGCCTTAATAGCATTAGTCTCTTGTCATAAACTTTCTTCTTTACACATGATGCAATATTACAAACGTTCGAGGTTTATATAACATCTTCGGGACCGTTTCTTGTACTACTGTTTCACTGGTTTCAGAACTATATTATGGAGGATAGTTGCAGACACAAAAACCAATTCTGATTTATCATTGTAACTTTTTTCTCTGATGTTTGAAGCAGATGGTGCAAAAGTTCCAATACCGTGATCATCTAAACGAGTAACCAATTCAGAAGGTGTTTTGGGGATGAACTGAGCTGTTTATGTTATTAATGGATTTATGCATCTGATGAGATGAGAATTGAAACTGTGGCACGAGTCTACTCCTGGCCGAAGTGTGTAGCCCGGCTCCATATCGAGGATGCAGCTGAGATTGTGATTCGAGGAGTTTGAGGTGCAGCCTAACTTGACCCATAGTTGAATGCAGTAACTTTCATTTGTATGATGCAAAGTGGTTGGAGTTACTTGTGATGTCATGGTTAAGATCCTCACCTTATCGAACTCCTTCATTGATCTCAAGGCTTGAATGAAACAAAGTAGTCATTGTACAGTTCATAATTGAATACAGTAACTTTCATTTGTATGATGCGAAGTGGTGGAGTTACTCGTGACGTCGTGGTTAAGATCCTCGCCTTATCGAACTACTGAGCATCTTGACGTGCAGATCTTTTGTCAGTGAAGTTAGCGATGAACAGTGACGGTGAAGATCAAACAAACTCCATTTCCCTTCATTGATCTCAAGCCAAAGTAGTCATTATACAGTTCAGGTGGAGTTATTGTGACGTCGTGGTTAAGCTCCTCACTGTATCAAACTGCCGAGCATCTCGACGTGCAGATCTTTTGTCAGCGAAGTTAGCGATGAACGATGACGGTGAAGAGCAAACAAACTCCATTTCCCTTCATTGATCTCAAGGCTTGAATGAAACAAAGTAGCCATTGTACAGTTCATATGGCTTACACTGTGATTGCTCTAATAGGGGGCCATCTAGCGGTACATTTTCCAGTACCCTTGGTGTATTCTATCCAAACCATGAACCAGGAACACTGGCAATGCTACTGACAGACCTGTGGGTTGAGTAACAGTGCTTATGCTAATTACTTTGCAGGGCTGATCAAGCGACTAAAGTTAACCAAGCAGTGGTGTGTCGGTGA

mRNA sequence

ATGCGAAAATTCAAAAAATGTGACGTGAAAAACGAATCGAAGAAAGGAGGAGACTGCAGTCTGCTGGAGGGACGGCGGAGCACAGCCAGCTATAAGAAACTCGCCGCGGCTGTTGATTTCACCGGCGTCGTCGAAACTTTGGGCCTTCTATATTGCATAGATTGTTATTTGATTTCGAATTACGAAGTGAAATCCAGAGTAGAATATTCGGCTATCTCGATGATGTTCGCGGCGTTTGCAAGCGAATCGCCTCCGTCTCACATTTCTGTGCTTGGATTCCTGAACGGAGCCCTTAACTTTTTCAAGCGCGATATTTCTCGGATGTTCGCCGTCTTTAACGGCCTATCTAACATTGATGCAGTGGCGAGGCCCGACGAGGATGAGGATTCATTACAGCCTGCTATTAAAAGTTTGATGACAACTGACGGTGACCATTGCGAGTTGAGATTCTCGGCTTGTTTTTCAGAAAAGCGTAATTTTGATGGCGAAAGTGATCCGCAGGCTGTTTTCAACGTGTTGGACGCTCTGCTCAGGGGTAGTTTGGATCGTTTGAAGGCCATGAGGGAAAGCATATGTTTAGCAAAGTCAGGTCTTCAGAAATGTCTTTGGGAGGCCGTTCAGCAACCTGACTACACTGCCATGGTTAGGGATTTGTGTTTAAAAGGAAAATTAGGAGCAGCTCTTTTGCTTCGGAGAAAGTTGATAAGACAAGGTTTTGTTGTTGATTTACTCACACACAATTATCTTCTTAATGGACTGTGTATAAACTGTGATATGGAGATAGCAGATTCTCTTTTTAGGGAAATGTTAGAAAGTGGTCCTTCTCCCAGTTGTGCCACATACAACATTATTATTAAGGGTTTCTGCCTTCATAGGAATATGGATAAAGCTCTCGACTTATTTTATACCATGGCTAATAATGGTATTAAGCCAAGTAGAATTACCTATAACATACTTTTACATGCATTGTGCAAGAGAGGCATCCTGGAGGATGCTCGGAAGCTTCTTGAAGATATCCTTGATGATGATATTAAAACAACAGATGATGCAATCACATCAACTATATTAATGGATGGTTTTTTTAAAGGTGGAGATATGGTTCAGGCTATTTCTTTATGGTCTGAGATGGTGGAAAAGAAGACAGAGATTGATGTCGTTGCATACAACGTCCTTATTCACGGGCTTTGTTTGAATCAAGATAAGAAAATTGCATTTGGCTGTGTTGTTGATATGATCAAGAGGGGTTTTATTCCCGATATCTTTACATACAACACTCTAATCAGTGATCTTTGTAAAGAGGGCCAATTTGATGAGGTTTACTATATACATGATGTCATGTCACGAATGGGTGTTTCTCCAGATCATATTTCATACAAAATGATTATTCAAGGTCTATGTATTCATGGAGATGCTATCAAAGCTAATGAGTTTCTTCATTCAATGTTAGAGAAATCGATGGTGCCTGAGCCTCGTATCTGGAACCTGATAATCGATTGTTATGGAAGGTATGGAGATCTGAGCAATGCAATCTCCATCAGGGATCAGATGTTGGCCACCGGCGTGCTACCAAATGTATTTACTTACAATGCATTGATTCACGCACAAGTTAAAGGAGGGAACATATTCAATGCTTATTCTCTGAAAAAGGATATGCTTTTGTTAGGTCATTTTCCAGACGTTGTTACTTATAATTTATTGATAAGTGGTGCCTGTAAGTGTGGACAAATTCGTTCTGCCCTTCAATTATATGATGAAATGCTGAGGAAGGGGTACGAACCAGATAAGATAACCTACACAGAACTAATAAGAGGTCACTGTATATGTGGTGACATGAAGGAGGCAGAAGATCTATTTATGAAGTTACACAGATCTGGGTTGCCAATGGATATTGTCCCATTTAAAATTATTTTTGAGAAGTACCATAGAATAGGAGAGTCTGAAATGGCATTTAAATTTTATCAAAGGTGGAGTTATTGTGACGTCGTGGTTAAGCTCCTCACTGTATCAAACTGCCGAGCATCTCGACGTGCAGATCTTTTGTCAGCGAAGGCTGATCAAGCGACTAAAGTTAACCAAGCAGTGGTGTGTCGGTGA

Coding sequence (CDS)

ATGCGAAAATTCAAAAAATGTGACGTGAAAAACGAATCGAAGAAAGGAGGAGACTGCAGTCTGCTGGAGGGACGGCGGAGCACAGCCAGCTATAAGAAACTCGCCGCGGCTGTTGATTTCACCGGCGTCGTCGAAACTTTGGGCCTTCTATATTGCATAGATTGTTATTTGATTTCGAATTACGAAGTGAAATCCAGAGTAGAATATTCGGCTATCTCGATGATGTTCGCGGCGTTTGCAAGCGAATCGCCTCCGTCTCACATTTCTGTGCTTGGATTCCTGAACGGAGCCCTTAACTTTTTCAAGCGCGATATTTCTCGGATGTTCGCCGTCTTTAACGGCCTATCTAACATTGATGCAGTGGCGAGGCCCGACGAGGATGAGGATTCATTACAGCCTGCTATTAAAAGTTTGATGACAACTGACGGTGACCATTGCGAGTTGAGATTCTCGGCTTGTTTTTCAGAAAAGCGTAATTTTGATGGCGAAAGTGATCCGCAGGCTGTTTTCAACGTGTTGGACGCTCTGCTCAGGGGTAGTTTGGATCGTTTGAAGGCCATGAGGGAAAGCATATGTTTAGCAAAGTCAGGTCTTCAGAAATGTCTTTGGGAGGCCGTTCAGCAACCTGACTACACTGCCATGGTTAGGGATTTGTGTTTAAAAGGAAAATTAGGAGCAGCTCTTTTGCTTCGGAGAAAGTTGATAAGACAAGGTTTTGTTGTTGATTTACTCACACACAATTATCTTCTTAATGGACTGTGTATAAACTGTGATATGGAGATAGCAGATTCTCTTTTTAGGGAAATGTTAGAAAGTGGTCCTTCTCCCAGTTGTGCCACATACAACATTATTATTAAGGGTTTCTGCCTTCATAGGAATATGGATAAAGCTCTCGACTTATTTTATACCATGGCTAATAATGGTATTAAGCCAAGTAGAATTACCTATAACATACTTTTACATGCATTGTGCAAGAGAGGCATCCTGGAGGATGCTCGGAAGCTTCTTGAAGATATCCTTGATGATGATATTAAAACAACAGATGATGCAATCACATCAACTATATTAATGGATGGTTTTTTTAAAGGTGGAGATATGGTTCAGGCTATTTCTTTATGGTCTGAGATGGTGGAAAAGAAGACAGAGATTGATGTCGTTGCATACAACGTCCTTATTCACGGGCTTTGTTTGAATCAAGATAAGAAAATTGCATTTGGCTGTGTTGTTGATATGATCAAGAGGGGTTTTATTCCCGATATCTTTACATACAACACTCTAATCAGTGATCTTTGTAAAGAGGGCCAATTTGATGAGGTTTACTATATACATGATGTCATGTCACGAATGGGTGTTTCTCCAGATCATATTTCATACAAAATGATTATTCAAGGTCTATGTATTCATGGAGATGCTATCAAAGCTAATGAGTTTCTTCATTCAATGTTAGAGAAATCGATGGTGCCTGAGCCTCGTATCTGGAACCTGATAATCGATTGTTATGGAAGGTATGGAGATCTGAGCAATGCAATCTCCATCAGGGATCAGATGTTGGCCACCGGCGTGCTACCAAATGTATTTACTTACAATGCATTGATTCACGCACAAGTTAAAGGAGGGAACATATTCAATGCTTATTCTCTGAAAAAGGATATGCTTTTGTTAGGTCATTTTCCAGACGTTGTTACTTATAATTTATTGATAAGTGGTGCCTGTAAGTGTGGACAAATTCGTTCTGCCCTTCAATTATATGATGAAATGCTGAGGAAGGGGTACGAACCAGATAAGATAACCTACACAGAACTAATAAGAGGTCACTGTATATGTGGTGACATGAAGGAGGCAGAAGATCTATTTATGAAGTTACACAGATCTGGGTTGCCAATGGATATTGTCCCATTTAAAATTATTTTTGAGAAGTACCATAGAATAGGAGAGTCTGAAATGGCATTTAAATTTTATCAAAGGTGGAGTTATTGTGACGTCGTGGTTAAGCTCCTCACTGTATCAAACTGCCGAGCATCTCGACGTGCAGATCTTTTGTCAGCGAAGGCTGATCAAGCGACTAAAGTTAACCAAGCAGTGGTGTGTCGGTGA
Homology
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BLAST of CmoCh05G006640 vs. Swiss-Prot
Match: PP396_ARATH (Pentatricopeptide repeat-containing protein At5g24830 OS=Arabidopsis thaliana GN=At5g24830 PE=2 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 3.4e-153
Identity = 280/583 (48.03%), Postives = 386/583 (66.21%), Query Frame = 1 

Query: 82  ESPPSHISVLGFLNGALNFFKRDISRMFA-VFNGLSNID----AVARPDEDEDSLQPAIK 141
           E   S  +V   LN +L+F   ++SR+ A +F  L + +     + RP        P+I 
Sbjct: 9   EVTSSQFTVFRLLNQSLDFVSDNVSRLLAPIFTNLRDFEMRLSCIERP--------PSIS 68

Query: 142 SLMTTDGDHCELRFSACFSEKRNFDGESDPQAVFNVLDALLRGSLDRLKAMRESICLAKS 201
                 G+H  L     FS+++++D + DP+A+FNVLD +L+ SLDRL ++RES+C  KS
Sbjct: 69  ------GNHSHLCTEKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQTKS 128

Query: 202 -GLQKCLWEAVQQPDYTAMVRDLCLKGKLGAALLLRRKLIRQGFVVDLLTHNYLLNGLCI 261
                CL        +++++RDLCL+GKL AAL LR+K+I  G +  L+THN+LLNGLC 
Sbjct: 129 FDYDDCL------SIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCK 188

Query: 262 NCDMEIADSLFREMLESGPSPSCATYNIIIKGFCLHRNMDKALDLFYTMANNGIKPSRIT 321
              +E AD L REM E GPSP+C +YN +IKG C   N+DKAL LF TM   GI+P+R+T
Sbjct: 189 AGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVT 248

Query: 322 YNILLHALCKRGIL-EDARKLLEDILDDDIKTTD-DAITSTILMDGFFKGGDMVQAISLW 381
            NI++HALC++G++  + +KLLE+ILD        D +  TILMD  FK G++VQA+ +W
Sbjct: 249 CNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVW 308

Query: 382 SEMVEKKTEIDVVAYNVLIHGLCLNQDKKIAFGCVVDMIKRGFIPDIFTYNTLISDLCKE 441
            EM +K    D V YNV+I GLC + +   A+G + DM+KRG  PD+FTYNTLIS LCKE
Sbjct: 309 KEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKE 368

Query: 442 GQFDEVYYIHDVMSRMGVSPDHISYKMIIQGLCIHGDAIKANEFLHSMLEKSMVPEPRIW 501
           G+FDE   +H  M   GV+PD ISYK+IIQGLCIHGD  +ANEFL SML+ S++PE  +W
Sbjct: 369 GKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLW 428

Query: 502 NLIIDCYGRYGDLSNAISIRDQMLATGVLPNVFTYNALIHAQVKGGNIFNAYSLKKDMLL 561
           N++ID YGRYGD S+A+S+ + ML+ GV PNV+T NALIH  VKGG + +A+ +K +M  
Sbjct: 429 NVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRS 488

Query: 562 LGHFPDVVTYNLLISGACKCGQIRSALQLYDEMLRKGYEPDKITYTELIRGHCICGDMKE 621
               PD  TYNLL+  AC  G +R A QLYDEMLR+G +PD ITYTEL+RG C  G +K+
Sbjct: 489 TKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKK 548

Query: 622 AEDLFMKLHRSGLPMDIVPFKIIFEKYHRIGESEMAFKFYQRW 657
           AE L  ++  +G+ +D VPF I+ +KY R+     A+  Y++W
Sbjct: 549 AESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKW 571

[Close]
BLAST of CmoCh05G006640 vs. Swiss-Prot
Match: PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 247.3 bits (630), Expect = 5.0e-64
Identity = 134/431 (31.09%), Postives = 221/431 (51.28%), Query Frame = 1 

Query: 211 YTAMVRDLCLKGKLGAALLLRRKLIRQGFVVDLLTHNYLLNGLCINCDMEIADSLFREML 270
           +  ++  L L  K   A+ L  +++ +G   DL+T+  ++NGLC   D ++A +L  +M 
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248

Query: 271 ESGPSPSCATYNIIIKGFCLHRNMDKALDLFYTMANNGIKPSRITYNILLHALCKRGILE 330
           +    P    YN II G C +++MD AL+LF  M   GI+P+ +TY+ L+  LC  G   
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308

Query: 331 DARKLLEDILDDDIKTTDDAITSTILMDGFFKGGDMVQAISLWSEMVEKKTEIDVVAYNV 390
           DA +LL D+++   K   D  T + L+D F K G +V+A  L+ EMV++  +  +V Y+ 
Sbjct: 309 DASRLLSDMIER--KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 368

Query: 391 LIHGLCLNQDKKIAFGCVVDMIKRGFIPDIFTYNTLISDLCKEGQFDEVYYIHDVMSRMG 450
           LI+G C++     A      M+ +   PD+ TYNTLI   CK  + +E   +   MS+ G
Sbjct: 369 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 428

Query: 451 VSPDHISYKMIIQGLCIHGDAIKANEFLHSMLEKSMVPEPRIWNLIIDCYGRYGDLSNAI 510
           +  + ++Y ++IQGL   GD   A E    M+   + P    +N ++D   + G L  A+
Sbjct: 429 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 488

Query: 511 SIRDQMLATGVLPNVFTYNALIHAQVKGGNIFNAYSLKKDMLLLGHFPDVVTYNLLISGA 570
            + + +  + + P ++TYN +I    K G + + + L  ++ L G  PDVV YN +ISG 
Sbjct: 489 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 548

Query: 571 CKCGQIRSALQLYDEMLRKGYEPDKITYTELIRGHCICGDMKEAEDLFMKLHRSGLPMDI 630
           C+ G    A  L+ EM   G  P+   Y  LIR     GD + + +L  ++   G   D 
Sbjct: 549 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 608

Query: 631 VPFKIIFEKYH 642
               ++    H
Sbjct: 609 STIGLVTNMLH 617

[Close]
BLAST of CmoCh05G006640 vs. Swiss-Prot
Match: PP437_ARATH (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 8.0e-62
Identity = 134/417 (32.13%), Postives = 216/417 (51.80%), Query Frame = 1 

Query: 211 YTAMVRDLCLKGKLGAALLLRRKLIRQGFVVDLLTHNYLLNGLCINCDMEIADSLFREML 270
           YT+++   C KGK+  AL L  ++  +G    + T   LL+GL     +  A  LF EM 
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534

Query: 271 ESGPSPSCATYNIIIKGFCLHRNMDKALDLFYTMANNGIKPSRITYNILLHALCKRGILE 330
           E    P+  TYN++I+G+C   +M KA +    M   GI P   +Y  L+H LC  G   
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594

Query: 331 DARKLLEDILDDDIKTTDDAITSTILMDGFFKGGDMVQAISLWSEMVEKKTEIDVVAYNV 390
           +A+  ++ +   + +  +  I  T L+ GF + G + +A+S+  EMV++  ++D+V Y V
Sbjct: 595 EAKVFVDGLHKGNCELNE--ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 654

Query: 391 LIHGLCLNQDKKIAFGCVVDMIKRGFIPDIFTYNTLISDLCKEGQFDEVYYIHDVMSRMG 450
           LI G   ++D+K+ FG + +M  RG  PD   Y ++I    K G F E + I D+M   G
Sbjct: 655 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 714

Query: 451 VSPDHISYKMIIQGLCIHGDAIKANEFLHSMLEKSMVPEPRIWNLIIDCYGR-YGDLSNA 510
             P+ ++Y  +I GLC  G   +A      M   S VP    +   +D   +   D+  A
Sbjct: 715 CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKA 774

Query: 511 ISIRDQMLATGVLPNVFTYNALIHAQVKGGNIFNAYSLKKDMLLLGHFPDVVTYNLLISG 570
           + + + +L  G+L N  TYN LI    + G I  A  L   M+  G  PD +TY  +I+ 
Sbjct: 775 VELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINE 834

Query: 571 ACKCGQIRSALQLYDEMLRKGYEPDKITYTELIRGHCICGDMKEAEDLFMKLHRSGL 627
            C+   ++ A++L++ M  KG  PD++ Y  LI G C+ G+M +A +L  ++ R GL
Sbjct: 835 LCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888

[Close]
BLAST of CmoCh05G006640 vs. Swiss-Prot
Match: PP376_ARATH (Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.0e-61
Identity = 132/431 (30.63%), Postives = 216/431 (50.12%), Query Frame = 1 

Query: 224 LGAALLLRRKLIRQGFVVDLLTHNYLLNGLCINCDMEIADSLFREMLESGPSPSCATYNI 283
           +G  L L  ++        +  +N L++GLC    M  A+ LF EML     PS  TYN 
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254

Query: 284 IIKGFCLHRNMDKALDLFYTMANNGIKPSRITYNILLHALCKRGILEDARKLLEDILDDD 343
           +I G+C   N +K+  +   M  + I+PS IT+N LL  L K G++EDA  +L+++   D
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM--KD 314

Query: 344 IKTTDDAITSTILMDGFFKGGDMVQAISLWSEMVEKKTEIDVVAYNVLIHGLCLNQDKKI 403
           +    DA T +IL DG+        A+ ++   V+   +++    ++L++ LC     + 
Sbjct: 315 LGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 374

Query: 404 AFGCVVDMIKRGFIPDIFTYNTLISDLCKEGQFDEVYYIHDVMSRMGVSPDHISYKMIIQ 463
           A   +   + +G +P+   YNT+I   C++G         + M + G+ PDH++Y  +I+
Sbjct: 375 AEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIR 434

Query: 464 GLCIHGDAIKANEFLHSMLEKSMVPEPRIWNLIIDCYGRYGDLSNAISIRDQMLATGVLP 523
             C  G+   A + ++ M  K + P    +N++I  YGR  +      I  +M   G +P
Sbjct: 435 RFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP 494

Query: 524 NVFTYNALIHAQVKGGNIFNAYSLKKDMLLLGHFPDVVTYNLLISGACKCGQIRSALQLY 583
           NV +Y  LI+   KG  +  A  +K+DM   G  P V  YN+LI G C  G+I  A +  
Sbjct: 495 NVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFS 554

Query: 584 DEMLRKGYEPDKITYTELIRGHCICGDMKEAEDLFMKLHRSGLPMDIVPFKIIFEKYHRI 643
            EML+KG E + +TY  LI G  + G + EAEDL +++ R GL  D+  +  +   Y   
Sbjct: 555 KEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFA 614

Query: 644 GESEMAFKFYQ 655
           G  +     Y+
Sbjct: 615 GNVQRCIALYE 623

[Close]
BLAST of CmoCh05G006640 vs. Swiss-Prot
Match: PP445_ARATH (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.4e-61
Identity = 138/455 (30.33%), Postives = 235/455 (51.65%), Query Frame = 1 

Query: 204 EAVQQPD---YTAMVRDLCLKGKLGAALLLRRKLIRQGFVVDLLTHNYLLNGLCINCDME 263
           EA   PD   YT+++   C +  L +A  +  ++  +G   + + + +L++GLC+   ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 264 IADSLFREMLESGPSPSCATYNIIIKGFCLHRNMDKALDLFYTMANNGIKPSRITYNILL 323
            A  LF +M +    P+  TY ++IK  C      +AL+L   M   GIKP+  TY +L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 324 HALCKRGILEDARKLLEDILDDDIKTTDDAITSTILMDGFFKGGDMVQAISLWSEMVEKK 383
            +LC +   E AR+LL  +L+  +    + IT   L++G+ K G +  A+ +   M  +K
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMP--NVITYNALINGYCKRGMIEDAVDVVELMESRK 425

Query: 384 TEIDVVAYNVLIHGLCLNQDKKIAFGCVVDMIKRGFIPDIFTYNTLISDLCKEGQFDEVY 443
              +   YN LI G C +   K A G +  M++R  +PD+ TYN+LI   C+ G FD  Y
Sbjct: 426 LSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 485

Query: 444 YIHDVMSRMGVSPDHISYKMIIQGLCIHGDAIKANEFLHSMLEKSMVPEPRIWNLIIDCY 503
            +  +M+  G+ PD  +Y  +I  LC      +A +   S+ +K + P   ++  +ID Y
Sbjct: 486 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 545

Query: 504 GRYGDLSNAISIRDQMLATGVLPNVFTYNALIHAQVKGGNIFNAYSLKKDMLLLGHFPDV 563
            + G +  A  + ++ML+   LPN  T+NALIH     G +  A  L++ M+ +G  P V
Sbjct: 546 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 605

Query: 564 VTYNLLISGACKCGQIRSALQLYDEMLRKGYEPDKITYTELIRGHCICGDMKEAEDLFMK 623
            T  +LI    K G    A   + +ML  G +PD  TYT  I+ +C  G + +AED+  K
Sbjct: 606 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 665

Query: 624 LHRSGLPMDIVPFKIIFEKYHRIGESEMAFKFYQR 656
           +  +G+  D+  +  + + Y  +G++  AF   +R
Sbjct: 666 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697

[Close]
BLAST of CmoCh05G006640 vs. TrEMBL
Match: A0A0A0LPD4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379150 PE=4 SV=1)

HSP 1 Score: 988.0 bits (2553), Expect = 5.8e-285
Identity = 482/582 (82.82%), Postives = 519/582 (89.18%), Query Frame = 1 

Query: 75  MFAAFASESPPSHISVLGFLNGALNFFKRDISRMFAVFNGLSNIDAVARPDEDEDSLQPA 134
           M AA A ES PS I VLGFL+GALN  KRDISRMFAVF G  +ID  AR +EDEDSL PA
Sbjct: 1   MVAALAIESAPSQILVLGFLHGALNSLKRDISRMFAVFYGRPDIDEAARSNEDEDSLHPA 60

Query: 135 IKSLMTTDGDHCELRFSACFSEKRNFDGESDPQAVFNVLDALLRGSLDRLKAMRESICLA 194
           +KSLMTT GDHC+LR S CFSEKRNF+GE DP AVFNVLDALL+GSLDRLK MRESICLA
Sbjct: 61  LKSLMTTVGDHCDLRSSDCFSEKRNFNGEGDPGAVFNVLDALLKGSLDRLKTMRESICLA 120

Query: 195 KSGLQKCLWEAVQQPDYTAMVRDLCLKGKLGAALLLRRKLIRQGFVVDLLTHNYLLNGLC 254
           KSGLQKC+ EA QQPDYT MVRDLCLKGK GAALLLRRKLI++GF VDL+THNYLLNGLC
Sbjct: 121 KSGLQKCVLEATQQPDYTVMVRDLCLKGKFGAALLLRRKLIKEGFAVDLVTHNYLLNGLC 180

Query: 255 INCDMEIADSLFREMLESGPSPSCATYNIIIKGFCLHRNMDKALDLFYTMANNGIKPSRI 314
           INCDME+ADSLFREMLE GPSP+CATYNIIIKGFCL  NMDKALDLFYTM N+GI+PSRI
Sbjct: 181 INCDMEMADSLFREMLEMGPSPNCATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRI 240

Query: 315 TYNILLHALCKRGILEDARKLLEDILDDDIKTTDDAITSTILMDGFFKGGDMVQAISLWS 374
           TYNILLHALCKRGIL DARKLLE IL DDIKTTDDAITSTILMD  FK GD +QA++LW 
Sbjct: 241 TYNILLHALCKRGILVDARKLLEVILGDDIKTTDDAITSTILMDSCFKSGDTIQAVALWD 300

Query: 375 EMVEKKTEIDVVAYNVLIHGLCLNQDKKIAFGCVVDMIKRGFIPDIFTYNTLISDLCKEG 434
           +MVEKKTEIDVVAYNVLIHGLCLNQDKKIA G V DM+KRGF+PDIFTYNTLIS  CKEG
Sbjct: 301 KMVEKKTEIDVVAYNVLIHGLCLNQDKKIALGYVADMLKRGFLPDIFTYNTLISAFCKEG 360

Query: 435 QFDEVYYIHDVMSRMGVSPDHISYKMIIQGLCIHGDAIKANEFLHSMLEKSMVPEPRIWN 494
           QF + YYIHDVMSRMGVSPD I YKMIIQ LC++GDAIKA+EFLHSMLEKSMVPEP IWN
Sbjct: 361 QFGDAYYIHDVMSRMGVSPDQILYKMIIQALCMNGDAIKADEFLHSMLEKSMVPEPHIWN 420

Query: 495 LIIDCYGRYGDLSNAISIRDQMLATGVLPNVFTYNALIHAQVKGGNIFNAYSLKKDMLLL 554
           LIIDCYGRYG LSNAIS RDQML  GV PNVFTYNALIHAQV+GGNIF+AYSLKK+MLLL
Sbjct: 421 LIIDCYGRYGYLSNAISKRDQMLVAGVQPNVFTYNALIHAQVRGGNIFSAYSLKKEMLLL 480

Query: 555 GHFPDVVTYNLLISGACKCGQIRSALQLYDEMLRKGYEPDKITYTELIRGHCICGDMKEA 614
           G FPDVVTYNLLI+GACK GQ+R ALQLYDEMLRKGYE DKITYTELI GHC+CG+MKEA
Sbjct: 481 GLFPDVVTYNLLINGACKHGQLRFALQLYDEMLRKGYEADKITYTELINGHCMCGEMKEA 540

Query: 615 EDLFMKLHRSGLPMDIVPFKIIFEKYHRIGESEMAFKFYQRW 657
           EDLF +LHRSGLPMDIVPFK+IFEKY +IGE +MA KFY+RW
Sbjct: 541 EDLFFELHRSGLPMDIVPFKVIFEKYQKIGEPDMALKFYRRW 582

[Close]
BLAST of CmoCh05G006640 vs. TrEMBL
Match: W9QZ27_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014894 PE=4 SV=1)

HSP 1 Score: 628.2 bits (1619), Expect = 1.2e-176
Identity = 324/603 (53.73%), Postives = 424/603 (70.32%), Query Frame = 1 

Query: 56  YLISNYEVKSRVEYSAISMMFAAFASESPPSHISVLGFLNGALNFFKRDISRMFAVFNGL 115
           Y++SNY+             FA    ES PS+IS L  LN  ++  K +I+++FA     
Sbjct: 9   YIVSNYQ-------------FAIVCGESSPSYISFLRTLNRTVDSIKDNIAQIFA----- 68

Query: 116 SNIDAVARPDEDEDSLQPAIKSLMTTDGDHCELRFSACFSEKRNFDGESDPQAVFNVLDA 175
            NI    R +  + S +  +  L    G++C+L     F +K + +GE DPQAVFNVLD+
Sbjct: 69  -NIFYSRRNNVADASFEELLGKL----GENCQLGAEELFPKKNDVNGEQDPQAVFNVLDS 128

Query: 176 LLRGSLDRLKAMRESICLAKSGLQKCLWEAVQQPDYTAMVRDLCLKGKLGAALLLRRKLI 235
           +L+ SLD LK MRESI   K        +A  Q +Y  ++RDLC+ GKLG AL LRRK++
Sbjct: 129 MLKESLDHLKTMRESITWPKMASLGWTRDANYQ-EYGTIIRDLCVDGKLGTALWLRRKMM 188

Query: 236 RQGFVVDLLTHNYLLNGLCINCDMEIADSLFREMLESGPSPSCATYNIIIKGFCLHRNMD 295
           R+G ++D+ THNYL+NGLC   D+E AD L +EML+ GPSPSCAT+N  IKG+CL  ++D
Sbjct: 189 RKGVILDIFTHNYLVNGLCKIGDLERADGLIKEMLQFGPSPSCATFNTFIKGYCLINDLD 248

Query: 296 KALDLFYTMANNGIKPSRITYNILLHALCKRGILEDARKLLEDILDDD-IKTTDDAITST 355
           KAL LF TMAN+GI P+RITYNIL+ ALCK+G+L D+ KLL++IL+D+  K+  D  T T
Sbjct: 249 KALYLFSTMANSGISPNRITYNILVQALCKKGLLVDSVKLLQNILNDENAKSKPDLHTFT 308

Query: 356 ILMDGFFKGGDMVQAISLWSEMVEKKTEIDVVAYNVLIHGLCLNQDKKIAFGCVVDMIKR 415
            LMDG+FK G+M+QA+SLW ++V+   E+DV+ YNVLI+GLCL+++   A+G   +MIKR
Sbjct: 309 TLMDGYFKNGNMLQALSLWHDVVKTDAEVDVIPYNVLINGLCLSREMNAAYGYFAEMIKR 368

Query: 416 GFIPDIFTYNTLISDLCKEGQFDEVYYIHDVMSRMGVSPDHISYKMIIQGLCIHGDAIKA 475
           G  PD+FTYN LIS LCKEG+ +E  ++HDVMSR GV PD ISYK+IIQGLCI G  ++A
Sbjct: 369 GLTPDVFTYNALISCLCKEGKSEEASHVHDVMSRTGVVPDQISYKLIIQGLCIDGAIVRA 428

Query: 476 NEFLHSMLEKSMVPEPRIWNLIIDCYGRYGDLSNAISIRDQMLATGVLPNVFTYNALIHA 535
           NE   SMLEKSMVP+ +IWNLII CYGR GD+S A SI DQML+ GV PNV+TYNALIHA
Sbjct: 429 NELFRSMLEKSMVPDTQIWNLIIGCYGRCGDVSEAFSIIDQMLSFGVRPNVYTYNALIHA 488

Query: 536 QVKGGNIFNAYSLKKDMLLLGHFPDVVTYNLLISGACKCGQIRSALQLYDEMLRKGYEPD 595
            VKGGN+ +A SLK+DML LG  PD+VTYNLLI  AC+ G +  A +L DEM R GYEPD
Sbjct: 489 LVKGGNVADACSLKQDMLRLGVSPDMVTYNLLIGAACRSGYLHFAAELRDEMQRTGYEPD 548

Query: 596 KITYTELIRGHCICGDMKEAEDLFMKLHRSGLPMDIVPFKIIFEKYHRIGESEMAFKFYQ 655
           KIT TE IRGHC+ G++ EAE LF K   SG P+D VP+KI+ +   ++ + +MAF  Y+
Sbjct: 549 KITCTEFIRGHCLKGNLNEAEKLFAKALDSGPPIDDVPYKILIKYCCKMKKLDMAFYLYK 587

Query: 656 RWS 658
            WS
Sbjct: 609 VWS 587

[Close]
BLAST of CmoCh05G006640 vs. TrEMBL
Match: B9SPQ9_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0204990 PE=4 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 3.4e-176
Identity = 324/570 (56.84%), Postives = 415/570 (72.81%), Query Frame = 1 

Query: 72  ISMMFAAFASESPPSHISVLGFLNGALNFFKRDISRMFA-VFNGLSNIDAVARPDEDEDS 131
           ++ +  +    S  SHI +L  L+ A++  K   +++FA +F   S ID  A    D+  
Sbjct: 1   MAALLISCGESSASSHIFLLRLLDRAMDTIKHHTAQIFANIFCRESIIDPNASYFFDD-- 60

Query: 132 LQPAIKSLMTTDGDHCELRFSACFSEKRNFDGESDPQAVFNVLDALLRGSLDRLKAMRES 191
                  ++ T  + C LR      + +N + E DPQ VFNVLDA+L+GSL+RLK+MRES
Sbjct: 61  -------MVKTLSNRCRLR-----RDNKNLNDEDDPQVVFNVLDAMLKGSLERLKSMRES 120

Query: 192 ICLA--KSGLQKCLWEAVQQPDYTAMVRDLCLKGKLGAALLLRRKLIRQGFVVDLLTHNY 251
           I ++  K GL     + V    + ++VRDLCL GKLGAAL LRRKL+ +GFV D+LTHN+
Sbjct: 121 IGISSVKVGLAGRSVD-VSYAGHASLVRDLCLAGKLGAALWLRRKLLHKGFVPDILTHNF 180

Query: 252 LLNGLCINCDMEIADSLFREMLESGPSPSCATYNIIIKGFCLHRNMDKALDLFYTMANNG 311
           L+NGLC + D++ AD L +EMLE GPSP+CAT+N  IKG+CL  N+DKAL LF +M+++G
Sbjct: 181 LVNGLCNSGDLQKADCLIKEMLEIGPSPNCATFNTFIKGYCLLNNVDKALYLFSSMSDSG 240

Query: 312 IKPSRITYNILLHALCKRGILEDARKLLEDILDDDIKTTDDAITSTILMDGFFKGGDMVQ 371
           +KP+R+T NIL+HALCKRG+LEDA+KLL ++LDD+ K   + ITSTILMDG  K GDMVQ
Sbjct: 241 VKPNRVTLNILVHALCKRGLLEDAKKLLGELLDDNEKARVNLITSTILMDGCIKNGDMVQ 300

Query: 372 AISLWSEMVEKKTEIDVVAYNVLIHGLCLNQDKKIAFGCVVDMIKRGFIPDIFTYNTLIS 431
           A+ +W  M +  T +D VAYNVLIHG CL ++ K+A+    DM+KRG +PDIFTYNTLIS
Sbjct: 301 ALGIWYAMSQNNTLMDSVAYNVLIHGFCLTRNMKLAYSYSCDMLKRGLLPDIFTYNTLIS 360

Query: 432 DLCKEGQFDEVYYIHDVMSRMGVSPDHISYKMIIQGLCIHGDAIKANEFLHSMLEKSMVP 491
            LCK G+  E  YIHDVM RMGV+PD ISYK++IQGLC  GD +KANE LH MLEKSMVP
Sbjct: 361 GLCKAGKLYEACYIHDVMLRMGVAPDQISYKIVIQGLCTRGDVLKANEHLHCMLEKSMVP 420

Query: 492 EPRIWNLIIDCYGRYGDLSNAISIRDQMLATGVLPNVFTYNALIHAQVKGGNIFNAYSLK 551
           E  +WNLIID + R GD +NA SIRDQML+ GV+PNVFTYNALIHAQVK GNI +AYSLK
Sbjct: 421 EAHVWNLIIDGFARCGDSANAFSIRDQMLSFGVVPNVFTYNALIHAQVKTGNIVDAYSLK 480

Query: 552 KDMLLLGHFPDVVTYNLLISGACKCGQIRSALQLYDEMLRKGYEPDKITYTELIRGHCIC 611
           K ML  G FPDV+TYNLLI  AC  G+I  A+QLY EMLR G+EPD ITYTELIRG C+ 
Sbjct: 481 KMMLCHGLFPDVITYNLLIGTACNAGRISIAVQLYYEMLRSGHEPDIITYTELIRGLCMR 540

Query: 612 GDMKEAEDLFMKLHRSGLPMDIVPFKIIFE 639
           G+MKEA++LF KL  +GL +D VPF+++ +
Sbjct: 541 GNMKEAKELFAKLQNTGLTVDHVPFQLLIK 555

[Close]
BLAST of CmoCh05G006640 vs. TrEMBL
Match: V4WAK2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007859mg PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 5.7e-176
Identity = 318/583 (54.55%), Postives = 412/583 (70.67%), Query Frame = 1 

Query: 75  MFAAFASESPPSHISVLGFLNGALNFFKRDISRMFAVFNGLSNIDAVARPDEDEDSLQPA 134
           +F A    S P HI +L FL    +  K +++R+F      SN    +R   D+D+L   
Sbjct: 3   LFIACGESSSPVHIQILRFLYQTFDSIKLNVARIF------SN----SRTCSDDDNLPCT 62

Query: 135 IKSLMTTDGDHCELRFSACFSEKRNFDGESDPQAVFNVLDALLRGSLDRLKAMRESICLA 194
           +  +M+  GD C  +    FS K + D E +PQAVFN LD +L+ +LDRLK MR+     
Sbjct: 63  LNDIMSYVGDQCRSKTRHWFSNKDS-DNEGNPQAVFNALDLILKENLDRLKTMRD----- 122

Query: 195 KSGLQKCLWEAVQQPDYTAMVRDLCLKGKLGAALLLRRKLIRQGFVVDLLTHNYLLNGLC 254
            +G  +C  E      + A++RDLCL GK+G AL LRRK+I++G V D+LTHNYL+N LC
Sbjct: 123 -TGPVRCTLE-TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELC 182

Query: 255 INCDMEIADSLFREMLESGPSPSCATYNIIIKGFCLHRNMDKALDLFYTMANNGIKPSRI 314
              D+E AD + REM E  PSP+CATYN  I G+C    +DKAL LF TMANNGI+P+R+
Sbjct: 183 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 242

Query: 315 TYNILLHALCKRGILEDARKLLEDIL-DDDIKTTDDAITSTILMDGFFKGGDMVQAISLW 374
           T+NIL+HALCK+G+L DA K L ++L DDD K T D ITSTILMD +FK GD  QA++LW
Sbjct: 243 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 302

Query: 375 SEMVEKKTEIDVVAYNVLIHGLCLNQDKKIAFGCVVDMIKRGFIPDIFTYNTLISDLCKE 434
           ++M +K  + D+VAYNVLI+G CLN D   AF     M+KRGF+PD+ TYNTL++ LCK+
Sbjct: 303 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 362

Query: 435 GQFDEVYYIHDVMSRMGVSPDHISYKMIIQGLCIHGDAIKANEFLHSMLEKSMVPEPRIW 494
           G+ DE  + + V+S+ GV+PD ISYK IIQGLCIHGD +KA EFL SMLEKS+VPEP IW
Sbjct: 363 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 422

Query: 495 NLIIDCYGRYGDLSNAISIRDQMLATGVLPNVFTYNALIHAQVKGGNIFNAYSLKKDMLL 554
           N+IID YGR GDLSNA SIRD ML+ GV  NVFT+NALI A+ +GG+IF+A+SLKK+MLL
Sbjct: 423 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 482

Query: 555 LGHFPDVVTYNLLISGACKCGQIRSALQLYDEMLRKGYEPDKITYTELIRGHCICGDMKE 614
            G FPDV TYNLLI  +C  G I  ALQLYDEMLR+G  PD ITYTELI+GHC  G+MKE
Sbjct: 483 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 542

Query: 615 AEDLFMKLHRSGLPMDIVPFKIIFEKYHRIGESEMAFKFYQRW 657
           AE++F K+   GL +D +PF+I+ ++Y R+ ES+ A   +Q+W
Sbjct: 543 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567

[Close]
BLAST of CmoCh05G006640 vs. TrEMBL
Match: A0A067FIR5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008249mg PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 5.7e-176
Identity = 318/583 (54.55%), Postives = 412/583 (70.67%), Query Frame = 1 

Query: 75  MFAAFASESPPSHISVLGFLNGALNFFKRDISRMFAVFNGLSNIDAVARPDEDEDSLQPA 134
           +F A    S P HI +L FL    +  K +++R+F      SN    +R   D+D+L   
Sbjct: 3   LFIACGESSSPVHIQILRFLYQTFDSIKLNVARIF------SN----SRTCSDDDNLPCT 62

Query: 135 IKSLMTTDGDHCELRFSACFSEKRNFDGESDPQAVFNVLDALLRGSLDRLKAMRESICLA 194
           +  +M+  GD C  +    FS K + D E +PQAVFN LD +L+ +LDRLK MR+     
Sbjct: 63  LNDIMSYVGDQCRSKTRHWFSNKDS-DNEGNPQAVFNALDLILKENLDRLKTMRD----- 122

Query: 195 KSGLQKCLWEAVQQPDYTAMVRDLCLKGKLGAALLLRRKLIRQGFVVDLLTHNYLLNGLC 254
            +G  +C  E      + A++RDLCL GK+G AL LRRK+I++G V D+LTHNYL+N LC
Sbjct: 123 -TGPVRCTLE-TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELC 182

Query: 255 INCDMEIADSLFREMLESGPSPSCATYNIIIKGFCLHRNMDKALDLFYTMANNGIKPSRI 314
              D+E AD + REM E  PSP+CATYN  I G+C    +DKAL LF TMANNGI+P+R+
Sbjct: 183 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 242

Query: 315 TYNILLHALCKRGILEDARKLLEDIL-DDDIKTTDDAITSTILMDGFFKGGDMVQAISLW 374
           T+NIL+HALCK+G+L DA K L ++L DDD K T D ITSTILMD +FK GD  QA++LW
Sbjct: 243 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 302

Query: 375 SEMVEKKTEIDVVAYNVLIHGLCLNQDKKIAFGCVVDMIKRGFIPDIFTYNTLISDLCKE 434
           ++M +K  + D+VAYNVLI+G CLN D   AF     M+KRGF+PD+ TYNTL++ LCK+
Sbjct: 303 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 362

Query: 435 GQFDEVYYIHDVMSRMGVSPDHISYKMIIQGLCIHGDAIKANEFLHSMLEKSMVPEPRIW 494
           G+ DE  + + V+S+ GV+PD ISYK IIQGLCIHGD +KA EFL SMLEKS+VPEP IW
Sbjct: 363 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 422

Query: 495 NLIIDCYGRYGDLSNAISIRDQMLATGVLPNVFTYNALIHAQVKGGNIFNAYSLKKDMLL 554
           N+IID YGR GDLSNA SIRD ML+ GV  NVFT+NALI A+ +GG+IF+A+SLKK+MLL
Sbjct: 423 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 482

Query: 555 LGHFPDVVTYNLLISGACKCGQIRSALQLYDEMLRKGYEPDKITYTELIRGHCICGDMKE 614
            G FPDV TYNLLI  +C  G I  ALQLYDEMLR+G  PD ITYTELI+GHC  G+MKE
Sbjct: 483 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 542

Query: 615 AEDLFMKLHRSGLPMDIVPFKIIFEKYHRIGESEMAFKFYQRW 657
           AE++F K+   GL +D +PF+I+ ++Y R+ ES+ A   +Q+W
Sbjct: 543 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567

[Close]
BLAST of CmoCh05G006640 vs. TAIR10
Match: AT5G24830.1 (AT5G24830.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 543.5 bits (1399), Expect = 1.9e-154
Identity = 280/583 (48.03%), Postives = 386/583 (66.21%), Query Frame = 1 

Query: 82  ESPPSHISVLGFLNGALNFFKRDISRMFA-VFNGLSNID----AVARPDEDEDSLQPAIK 141
           E   S  +V   LN +L+F   ++SR+ A +F  L + +     + RP        P+I 
Sbjct: 9   EVTSSQFTVFRLLNQSLDFVSDNVSRLLAPIFTNLRDFEMRLSCIERP--------PSIS 68

Query: 142 SLMTTDGDHCELRFSACFSEKRNFDGESDPQAVFNVLDALLRGSLDRLKAMRESICLAKS 201
                 G+H  L     FS+++++D + DP+A+FNVLD +L+ SLDRL ++RES+C  KS
Sbjct: 69  ------GNHSHLCTEKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQTKS 128

Query: 202 -GLQKCLWEAVQQPDYTAMVRDLCLKGKLGAALLLRRKLIRQGFVVDLLTHNYLLNGLCI 261
                CL        +++++RDLCL+GKL AAL LR+K+I  G +  L+THN+LLNGLC 
Sbjct: 129 FDYDDCL------SIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCK 188

Query: 262 NCDMEIADSLFREMLESGPSPSCATYNIIIKGFCLHRNMDKALDLFYTMANNGIKPSRIT 321
              +E AD L REM E GPSP+C +YN +IKG C   N+DKAL LF TM   GI+P+R+T
Sbjct: 189 AGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVT 248

Query: 322 YNILLHALCKRGIL-EDARKLLEDILDDDIKTTD-DAITSTILMDGFFKGGDMVQAISLW 381
            NI++HALC++G++  + +KLLE+ILD        D +  TILMD  FK G++VQA+ +W
Sbjct: 249 CNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVW 308

Query: 382 SEMVEKKTEIDVVAYNVLIHGLCLNQDKKIAFGCVVDMIKRGFIPDIFTYNTLISDLCKE 441
            EM +K    D V YNV+I GLC + +   A+G + DM+KRG  PD+FTYNTLIS LCKE
Sbjct: 309 KEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKE 368

Query: 442 GQFDEVYYIHDVMSRMGVSPDHISYKMIIQGLCIHGDAIKANEFLHSMLEKSMVPEPRIW 501
           G+FDE   +H  M   GV+PD ISYK+IIQGLCIHGD  +ANEFL SML+ S++PE  +W
Sbjct: 369 GKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLW 428

Query: 502 NLIIDCYGRYGDLSNAISIRDQMLATGVLPNVFTYNALIHAQVKGGNIFNAYSLKKDMLL 561
           N++ID YGRYGD S+A+S+ + ML+ GV PNV+T NALIH  VKGG + +A+ +K +M  
Sbjct: 429 NVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRS 488

Query: 562 LGHFPDVVTYNLLISGACKCGQIRSALQLYDEMLRKGYEPDKITYTELIRGHCICGDMKE 621
               PD  TYNLL+  AC  G +R A QLYDEMLR+G +PD ITYTEL+RG C  G +K+
Sbjct: 489 TKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKK 548

Query: 622 AEDLFMKLHRSGLPMDIVPFKIIFEKYHRIGESEMAFKFYQRW 657
           AE L  ++  +G+ +D VPF I+ +KY R+     A+  Y++W
Sbjct: 549 AESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKW 571

[Close]
BLAST of CmoCh05G006640 vs. TAIR10
Match: AT1G62670.1 (AT1G62670.1 rna processing factor 2)

HSP 1 Score: 247.3 bits (630), Expect = 2.8e-65
Identity = 134/431 (31.09%), Postives = 221/431 (51.28%), Query Frame = 1 

Query: 211 YTAMVRDLCLKGKLGAALLLRRKLIRQGFVVDLLTHNYLLNGLCINCDMEIADSLFREML 270
           +  ++  L L  K   A+ L  +++ +G   DL+T+  ++NGLC   D ++A +L  +M 
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248

Query: 271 ESGPSPSCATYNIIIKGFCLHRNMDKALDLFYTMANNGIKPSRITYNILLHALCKRGILE 330
           +    P    YN II G C +++MD AL+LF  M   GI+P+ +TY+ L+  LC  G   
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308

Query: 331 DARKLLEDILDDDIKTTDDAITSTILMDGFFKGGDMVQAISLWSEMVEKKTEIDVVAYNV 390
           DA +LL D+++   K   D  T + L+D F K G +V+A  L+ EMV++  +  +V Y+ 
Sbjct: 309 DASRLLSDMIER--KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 368

Query: 391 LIHGLCLNQDKKIAFGCVVDMIKRGFIPDIFTYNTLISDLCKEGQFDEVYYIHDVMSRMG 450
           LI+G C++     A      M+ +   PD+ TYNTLI   CK  + +E   +   MS+ G
Sbjct: 369 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 428

Query: 451 VSPDHISYKMIIQGLCIHGDAIKANEFLHSMLEKSMVPEPRIWNLIIDCYGRYGDLSNAI 510
           +  + ++Y ++IQGL   GD   A E    M+   + P    +N ++D   + G L  A+
Sbjct: 429 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 488

Query: 511 SIRDQMLATGVLPNVFTYNALIHAQVKGGNIFNAYSLKKDMLLLGHFPDVVTYNLLISGA 570
            + + +  + + P ++TYN +I    K G + + + L  ++ L G  PDVV YN +ISG 
Sbjct: 489 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 548

Query: 571 CKCGQIRSALQLYDEMLRKGYEPDKITYTELIRGHCICGDMKEAEDLFMKLHRSGLPMDI 630
           C+ G    A  L+ EM   G  P+   Y  LIR     GD + + +L  ++   G   D 
Sbjct: 549 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 608

Query: 631 VPFKIIFEKYH 642
               ++    H
Sbjct: 609 STIGLVTNMLH 617

[Close]
BLAST of CmoCh05G006640 vs. TAIR10
Match: AT5G59900.1 (AT5G59900.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 240.0 bits (611), Expect = 4.5e-63
Identity = 134/417 (32.13%), Postives = 216/417 (51.80%), Query Frame = 1 

Query: 211 YTAMVRDLCLKGKLGAALLLRRKLIRQGFVVDLLTHNYLLNGLCINCDMEIADSLFREML 270
           YT+++   C KGK+  AL L  ++  +G    + T   LL+GL     +  A  LF EM 
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534

Query: 271 ESGPSPSCATYNIIIKGFCLHRNMDKALDLFYTMANNGIKPSRITYNILLHALCKRGILE 330
           E    P+  TYN++I+G+C   +M KA +    M   GI P   +Y  L+H LC  G   
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594

Query: 331 DARKLLEDILDDDIKTTDDAITSTILMDGFFKGGDMVQAISLWSEMVEKKTEIDVVAYNV 390
           +A+  ++ +   + +  +  I  T L+ GF + G + +A+S+  EMV++  ++D+V Y V
Sbjct: 595 EAKVFVDGLHKGNCELNE--ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 654

Query: 391 LIHGLCLNQDKKIAFGCVVDMIKRGFIPDIFTYNTLISDLCKEGQFDEVYYIHDVMSRMG 450
           LI G   ++D+K+ FG + +M  RG  PD   Y ++I    K G F E + I D+M   G
Sbjct: 655 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 714

Query: 451 VSPDHISYKMIIQGLCIHGDAIKANEFLHSMLEKSMVPEPRIWNLIIDCYGR-YGDLSNA 510
             P+ ++Y  +I GLC  G   +A      M   S VP    +   +D   +   D+  A
Sbjct: 715 CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKA 774

Query: 511 ISIRDQMLATGVLPNVFTYNALIHAQVKGGNIFNAYSLKKDMLLLGHFPDVVTYNLLISG 570
           + + + +L  G+L N  TYN LI    + G I  A  L   M+  G  PD +TY  +I+ 
Sbjct: 775 VELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINE 834

Query: 571 ACKCGQIRSALQLYDEMLRKGYEPDKITYTELIRGHCICGDMKEAEDLFMKLHRSGL 627
            C+   ++ A++L++ M  KG  PD++ Y  LI G C+ G+M +A +L  ++ R GL
Sbjct: 835 LCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888

[Close]
BLAST of CmoCh05G006640 vs. TAIR10
Match: AT5G12100.1 (AT5G12100.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 239.6 bits (610), Expect = 5.9e-63
Identity = 132/431 (30.63%), Postives = 216/431 (50.12%), Query Frame = 1 

Query: 224 LGAALLLRRKLIRQGFVVDLLTHNYLLNGLCINCDMEIADSLFREMLESGPSPSCATYNI 283
           +G  L L  ++        +  +N L++GLC    M  A+ LF EML     PS  TYN 
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254

Query: 284 IIKGFCLHRNMDKALDLFYTMANNGIKPSRITYNILLHALCKRGILEDARKLLEDILDDD 343
           +I G+C   N +K+  +   M  + I+PS IT+N LL  L K G++EDA  +L+++   D
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM--KD 314

Query: 344 IKTTDDAITSTILMDGFFKGGDMVQAISLWSEMVEKKTEIDVVAYNVLIHGLCLNQDKKI 403
           +    DA T +IL DG+        A+ ++   V+   +++    ++L++ LC     + 
Sbjct: 315 LGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 374

Query: 404 AFGCVVDMIKRGFIPDIFTYNTLISDLCKEGQFDEVYYIHDVMSRMGVSPDHISYKMIIQ 463
           A   +   + +G +P+   YNT+I   C++G         + M + G+ PDH++Y  +I+
Sbjct: 375 AEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIR 434

Query: 464 GLCIHGDAIKANEFLHSMLEKSMVPEPRIWNLIIDCYGRYGDLSNAISIRDQMLATGVLP 523
             C  G+   A + ++ M  K + P    +N++I  YGR  +      I  +M   G +P
Sbjct: 435 RFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP 494

Query: 524 NVFTYNALIHAQVKGGNIFNAYSLKKDMLLLGHFPDVVTYNLLISGACKCGQIRSALQLY 583
           NV +Y  LI+   KG  +  A  +K+DM   G  P V  YN+LI G C  G+I  A +  
Sbjct: 495 NVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFS 554

Query: 584 DEMLRKGYEPDKITYTELIRGHCICGDMKEAEDLFMKLHRSGLPMDIVPFKIIFEKYHRI 643
            EML+KG E + +TY  LI G  + G + EAEDL +++ R GL  D+  +  +   Y   
Sbjct: 555 KEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFA 614

Query: 644 GESEMAFKFYQ 655
           G  +     Y+
Sbjct: 615 GNVQRCIALYE 623

[Close]
BLAST of CmoCh05G006640 vs. TAIR10
Match: AT5G65560.1 (AT5G65560.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 239.2 bits (609), Expect = 7.7e-63
Identity = 138/455 (30.33%), Postives = 235/455 (51.65%), Query Frame = 1 

Query: 204 EAVQQPD---YTAMVRDLCLKGKLGAALLLRRKLIRQGFVVDLLTHNYLLNGLCINCDME 263
           EA   PD   YT+++   C +  L +A  +  ++  +G   + + + +L++GLC+   ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 264 IADSLFREMLESGPSPSCATYNIIIKGFCLHRNMDKALDLFYTMANNGIKPSRITYNILL 323
            A  LF +M +    P+  TY ++IK  C      +AL+L   M   GIKP+  TY +L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 324 HALCKRGILEDARKLLEDILDDDIKTTDDAITSTILMDGFFKGGDMVQAISLWSEMVEKK 383
            +LC +   E AR+LL  +L+  +    + IT   L++G+ K G +  A+ +   M  +K
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMP--NVITYNALINGYCKRGMIEDAVDVVELMESRK 425

Query: 384 TEIDVVAYNVLIHGLCLNQDKKIAFGCVVDMIKRGFIPDIFTYNTLISDLCKEGQFDEVY 443
              +   YN LI G C +   K A G +  M++R  +PD+ TYN+LI   C+ G FD  Y
Sbjct: 426 LSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 485

Query: 444 YIHDVMSRMGVSPDHISYKMIIQGLCIHGDAIKANEFLHSMLEKSMVPEPRIWNLIIDCY 503
            +  +M+  G+ PD  +Y  +I  LC      +A +   S+ +K + P   ++  +ID Y
Sbjct: 486 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 545

Query: 504 GRYGDLSNAISIRDQMLATGVLPNVFTYNALIHAQVKGGNIFNAYSLKKDMLLLGHFPDV 563
            + G +  A  + ++ML+   LPN  T+NALIH     G +  A  L++ M+ +G  P V
Sbjct: 546 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 605

Query: 564 VTYNLLISGACKCGQIRSALQLYDEMLRKGYEPDKITYTELIRGHCICGDMKEAEDLFMK 623
            T  +LI    K G    A   + +ML  G +PD  TYT  I+ +C  G + +AED+  K
Sbjct: 606 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 665

Query: 624 LHRSGLPMDIVPFKIIFEKYHRIGESEMAFKFYQR 656
           +  +G+  D+  +  + + Y  +G++  AF   +R
Sbjct: 666 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697

[Close]
BLAST of CmoCh05G006640 vs. NCBI nr
Match: gi|778672271|ref|XP_011649772.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X1 [Cucumis sativus])

HSP 1 Score: 988.0 bits (2553), Expect = 8.3e-285
Identity = 482/582 (82.82%), Postives = 519/582 (89.18%), Query Frame = 1 

Query: 75  MFAAFASESPPSHISVLGFLNGALNFFKRDISRMFAVFNGLSNIDAVARPDEDEDSLQPA 134
           M AA A ES PS I VLGFL+GALN  KRDISRMFAVF G  +ID  AR +EDEDSL PA
Sbjct: 1   MVAALAIESAPSQILVLGFLHGALNSLKRDISRMFAVFYGRPDIDEAARSNEDEDSLHPA 60

Query: 135 IKSLMTTDGDHCELRFSACFSEKRNFDGESDPQAVFNVLDALLRGSLDRLKAMRESICLA 194
           +KSLMTT GDHC+LR S CFSEKRNF+GE DP AVFNVLDALL+GSLDRLK MRESICLA
Sbjct: 61  LKSLMTTVGDHCDLRSSDCFSEKRNFNGEGDPGAVFNVLDALLKGSLDRLKTMRESICLA 120

Query: 195 KSGLQKCLWEAVQQPDYTAMVRDLCLKGKLGAALLLRRKLIRQGFVVDLLTHNYLLNGLC 254
           KSGLQKC+ EA QQPDYT MVRDLCLKGK GAALLLRRKLI++GF VDL+THNYLLNGLC
Sbjct: 121 KSGLQKCVLEATQQPDYTVMVRDLCLKGKFGAALLLRRKLIKEGFAVDLVTHNYLLNGLC 180

Query: 255 INCDMEIADSLFREMLESGPSPSCATYNIIIKGFCLHRNMDKALDLFYTMANNGIKPSRI 314
           INCDME+ADSLFREMLE GPSP+CATYNIIIKGFCL  NMDKALDLFYTM N+GI+PSRI
Sbjct: 181 INCDMEMADSLFREMLEMGPSPNCATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRI 240

Query: 315 TYNILLHALCKRGILEDARKLLEDILDDDIKTTDDAITSTILMDGFFKGGDMVQAISLWS 374
           TYNILLHALCKRGIL DARKLLE IL DDIKTTDDAITSTILMD  FK GD +QA++LW 
Sbjct: 241 TYNILLHALCKRGILVDARKLLEVILGDDIKTTDDAITSTILMDSCFKSGDTIQAVALWD 300

Query: 375 EMVEKKTEIDVVAYNVLIHGLCLNQDKKIAFGCVVDMIKRGFIPDIFTYNTLISDLCKEG 434
           +MVEKKTEIDVVAYNVLIHGLCLNQDKKIA G V DM+KRGF+PDIFTYNTLIS  CKEG
Sbjct: 301 KMVEKKTEIDVVAYNVLIHGLCLNQDKKIALGYVADMLKRGFLPDIFTYNTLISAFCKEG 360

Query: 435 QFDEVYYIHDVMSRMGVSPDHISYKMIIQGLCIHGDAIKANEFLHSMLEKSMVPEPRIWN 494
           QF + YYIHDVMSRMGVSPD I YKMIIQ LC++GDAIKA+EFLHSMLEKSMVPEP IWN
Sbjct: 361 QFGDAYYIHDVMSRMGVSPDQILYKMIIQALCMNGDAIKADEFLHSMLEKSMVPEPHIWN 420

Query: 495 LIIDCYGRYGDLSNAISIRDQMLATGVLPNVFTYNALIHAQVKGGNIFNAYSLKKDMLLL 554
           LIIDCYGRYG LSNAIS RDQML  GV PNVFTYNALIHAQV+GGNIF+AYSLKK+MLLL
Sbjct: 421 LIIDCYGRYGYLSNAISKRDQMLVAGVQPNVFTYNALIHAQVRGGNIFSAYSLKKEMLLL 480

Query: 555 GHFPDVVTYNLLISGACKCGQIRSALQLYDEMLRKGYEPDKITYTELIRGHCICGDMKEA 614
           G FPDVVTYNLLI+GACK GQ+R ALQLYDEMLRKGYE DKITYTELI GHC+CG+MKEA
Sbjct: 481 GLFPDVVTYNLLINGACKHGQLRFALQLYDEMLRKGYEADKITYTELINGHCMCGEMKEA 540

Query: 615 EDLFMKLHRSGLPMDIVPFKIIFEKYHRIGESEMAFKFYQRW 657
           EDLF +LHRSGLPMDIVPFK+IFEKY +IGE +MA KFY+RW
Sbjct: 541 EDLFFELHRSGLPMDIVPFKVIFEKYQKIGEPDMALKFYRRW 582

[Close]
BLAST of CmoCh05G006640 vs. NCBI nr
Match: gi|659088663|ref|XP_008445100.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X1 [Cucumis melo])

HSP 1 Score: 983.4 bits (2541), Expect = 2.0e-283
Identity = 482/582 (82.82%), Postives = 517/582 (88.83%), Query Frame = 1 

Query: 75  MFAAFASESPPSHISVLGFLNGALNFFKRDISRMFAVFNGLSNIDAVARPDEDEDSLQPA 134
           M  A A ES PS I VLGFL+GALN  KRDISRMFAVF G  +ID  AR +EDEDSL PA
Sbjct: 1   MVTALAIESAPSQILVLGFLHGALNSLKRDISRMFAVFYGRPDIDEAARFNEDEDSLHPA 60

Query: 135 IKSLMTTDGDHCELRFSACFSEKRNFDGESDPQAVFNVLDALLRGSLDRLKAMRESICLA 194
           +KSLMTT GDHC+LR S CFSEK NF+GE DP AVFNVLDALL+GSLDRLKAMRESICLA
Sbjct: 61  LKSLMTTVGDHCDLRSSDCFSEKHNFNGEGDPGAVFNVLDALLKGSLDRLKAMRESICLA 120

Query: 195 KSGLQKCLWEAVQQPDYTAMVRDLCLKGKLGAALLLRRKLIRQGFVVDLLTHNYLLNGLC 254
           KSGLQKC  EAVQQPDYT MVRDLCLKGKLGAALLLRRKLI++GF VDL+THNYLLNGLC
Sbjct: 121 KSGLQKCFLEAVQQPDYTVMVRDLCLKGKLGAALLLRRKLIKEGFAVDLVTHNYLLNGLC 180

Query: 255 INCDMEIADSLFREMLESGPSPSCATYNIIIKGFCLHRNMDKALDLFYTMANNGIKPSRI 314
           INCDME+ADSLFREMLE GPSP+CATYNIIIKGFCL  NMDKALDLFYTM N+GI+PSRI
Sbjct: 181 INCDMEMADSLFREMLERGPSPNCATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRI 240

Query: 315 TYNILLHALCKRGILEDARKLLEDILDDDIKTTDDAITSTILMDGFFKGGDMVQAISLWS 374
           TYNILLHALCKRGIL DARKLLE IL DDIKTTDDAITSTILMDG FK GD +QAI+LW 
Sbjct: 241 TYNILLHALCKRGILVDARKLLEVILGDDIKTTDDAITSTILMDGCFKSGDTIQAIALWD 300

Query: 375 EMVEKKTEIDVVAYNVLIHGLCLNQDKKIAFGCVVDMIKRGFIPDIFTYNTLISDLCKEG 434
           +MVEKKTEIDVVAYNVLIHGLCLNQDKK A   V DM+KRGF+PDIFTYNTLIS  CKEG
Sbjct: 301 KMVEKKTEIDVVAYNVLIHGLCLNQDKKSALSYVADMLKRGFLPDIFTYNTLISAFCKEG 360

Query: 435 QFDEVYYIHDVMSRMGVSPDHISYKMIIQGLCIHGDAIKANEFLHSMLEKSMVPEPRIWN 494
           QF + YYIHDVMSRMGVSPD I YKMIIQ LC++GDAIKA+EFLHSMLEKSMVP+P IWN
Sbjct: 361 QFGDAYYIHDVMSRMGVSPDQILYKMIIQALCMNGDAIKADEFLHSMLEKSMVPDPHIWN 420

Query: 495 LIIDCYGRYGDLSNAISIRDQMLATGVLPNVFTYNALIHAQVKGGNIFNAYSLKKDMLLL 554
           LIIDCYGRYG LSNAIS R+QML  GV PNVFTYNALIHAQV+GGNIF+AYSLKK+MLLL
Sbjct: 421 LIIDCYGRYGYLSNAISTRNQMLVAGVQPNVFTYNALIHAQVRGGNIFSAYSLKKEMLLL 480

Query: 555 GHFPDVVTYNLLISGACKCGQIRSALQLYDEMLRKGYEPDKITYTELIRGHCICGDMKEA 614
           G FPD+VTYNLLI+GACK GQIR ALQLYDEMLRKGYE DKITYTELI GHC+CG+MKEA
Sbjct: 481 GLFPDIVTYNLLINGACKHGQIRYALQLYDEMLRKGYEADKITYTELINGHCMCGEMKEA 540

Query: 615 EDLFMKLHRSGLPMDIVPFKIIFEKYHRIGESEMAFKFYQRW 657
           EDLF +LHRSGLPMDIVPFKIIFEKY +IGE  MA KFY+RW
Sbjct: 541 EDLFFQLHRSGLPMDIVPFKIIFEKYQKIGEPNMALKFYRRW 582

[Close]
BLAST of CmoCh05G006640 vs. NCBI nr
Match: gi|778672274|ref|XP_011649773.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X2 [Cucumis sativus])

HSP 1 Score: 908.3 bits (2346), Expect = 8.3e-261
Identity = 437/518 (84.36%), Postives = 470/518 (90.73%), Query Frame = 1 

Query: 139 MTTDGDHCELRFSACFSEKRNFDGESDPQAVFNVLDALLRGSLDRLKAMRESICLAKSGL 198
           MTT GDHC+LR S CFSEKRNF+GE DP AVFNVLDALL+GSLDRLK MRESICLAKSGL
Sbjct: 1   MTTVGDHCDLRSSDCFSEKRNFNGEGDPGAVFNVLDALLKGSLDRLKTMRESICLAKSGL 60

Query: 199 QKCLWEAVQQPDYTAMVRDLCLKGKLGAALLLRRKLIRQGFVVDLLTHNYLLNGLCINCD 258
           QKC+ EA QQPDYT MVRDLCLKGK GAALLLRRKLI++GF VDL+THNYLLNGLCINCD
Sbjct: 61  QKCVLEATQQPDYTVMVRDLCLKGKFGAALLLRRKLIKEGFAVDLVTHNYLLNGLCINCD 120

Query: 259 MEIADSLFREMLESGPSPSCATYNIIIKGFCLHRNMDKALDLFYTMANNGIKPSRITYNI 318
           ME+ADSLFREMLE GPSP+CATYNIIIKGFCL  NMDKALDLFYTM N+GI+PSRITYNI
Sbjct: 121 MEMADSLFREMLEMGPSPNCATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRITYNI 180

Query: 319 LLHALCKRGILEDARKLLEDILDDDIKTTDDAITSTILMDGFFKGGDMVQAISLWSEMVE 378
           LLHALCKRGIL DARKLLE IL DDIKTTDDAITSTILMD  FK GD +QA++LW +MVE
Sbjct: 181 LLHALCKRGILVDARKLLEVILGDDIKTTDDAITSTILMDSCFKSGDTIQAVALWDKMVE 240

Query: 379 KKTEIDVVAYNVLIHGLCLNQDKKIAFGCVVDMIKRGFIPDIFTYNTLISDLCKEGQFDE 438
           KKTEIDVVAYNVLIHGLCLNQDKKIA G V DM+KRGF+PDIFTYNTLIS  CKEGQF +
Sbjct: 241 KKTEIDVVAYNVLIHGLCLNQDKKIALGYVADMLKRGFLPDIFTYNTLISAFCKEGQFGD 300

Query: 439 VYYIHDVMSRMGVSPDHISYKMIIQGLCIHGDAIKANEFLHSMLEKSMVPEPRIWNLIID 498
            YYIHDVMSRMGVSPD I YKMIIQ LC++GDAIKA+EFLHSMLEKSMVPEP IWNLIID
Sbjct: 301 AYYIHDVMSRMGVSPDQILYKMIIQALCMNGDAIKADEFLHSMLEKSMVPEPHIWNLIID 360

Query: 499 CYGRYGDLSNAISIRDQMLATGVLPNVFTYNALIHAQVKGGNIFNAYSLKKDMLLLGHFP 558
           CYGRYG LSNAIS RDQML  GV PNVFTYNALIHAQV+GGNIF+AYSLKK+MLLLG FP
Sbjct: 361 CYGRYGYLSNAISKRDQMLVAGVQPNVFTYNALIHAQVRGGNIFSAYSLKKEMLLLGLFP 420

Query: 559 DVVTYNLLISGACKCGQIRSALQLYDEMLRKGYEPDKITYTELIRGHCICGDMKEAEDLF 618
           DVVTYNLLI+GACK GQ+R ALQLYDEMLRKGYE DKITYTELI GHC+CG+MKEAEDLF
Sbjct: 421 DVVTYNLLINGACKHGQLRFALQLYDEMLRKGYEADKITYTELINGHCMCGEMKEAEDLF 480

Query: 619 MKLHRSGLPMDIVPFKIIFEKYHRIGESEMAFKFYQRW 657
            +LHRSGLPMDIVPFK+IFEKY +IGE +MA KFY+RW
Sbjct: 481 FELHRSGLPMDIVPFKVIFEKYQKIGEPDMALKFYRRW 518

[Close]
BLAST of CmoCh05G006640 vs. NCBI nr
Match: gi|659088665|ref|XP_008445101.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X2 [Cucumis melo])

HSP 1 Score: 906.4 bits (2341), Expect = 3.2e-260
Identity = 438/518 (84.56%), Postives = 469/518 (90.54%), Query Frame = 1 

Query: 139 MTTDGDHCELRFSACFSEKRNFDGESDPQAVFNVLDALLRGSLDRLKAMRESICLAKSGL 198
           MTT GDHC+LR S CFSEK NF+GE DP AVFNVLDALL+GSLDRLKAMRESICLAKSGL
Sbjct: 1   MTTVGDHCDLRSSDCFSEKHNFNGEGDPGAVFNVLDALLKGSLDRLKAMRESICLAKSGL 60

Query: 199 QKCLWEAVQQPDYTAMVRDLCLKGKLGAALLLRRKLIRQGFVVDLLTHNYLLNGLCINCD 258
           QKC  EAVQQPDYT MVRDLCLKGKLGAALLLRRKLI++GF VDL+THNYLLNGLCINCD
Sbjct: 61  QKCFLEAVQQPDYTVMVRDLCLKGKLGAALLLRRKLIKEGFAVDLVTHNYLLNGLCINCD 120

Query: 259 MEIADSLFREMLESGPSPSCATYNIIIKGFCLHRNMDKALDLFYTMANNGIKPSRITYNI 318
           ME+ADSLFREMLE GPSP+CATYNIIIKGFCL  NMDKALDLFYTM N+GI+PSRITYNI
Sbjct: 121 MEMADSLFREMLERGPSPNCATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRITYNI 180

Query: 319 LLHALCKRGILEDARKLLEDILDDDIKTTDDAITSTILMDGFFKGGDMVQAISLWSEMVE 378
           LLHALCKRGIL DARKLLE IL DDIKTTDDAITSTILMDG FK GD +QAI+LW +MVE
Sbjct: 181 LLHALCKRGILVDARKLLEVILGDDIKTTDDAITSTILMDGCFKSGDTIQAIALWDKMVE 240

Query: 379 KKTEIDVVAYNVLIHGLCLNQDKKIAFGCVVDMIKRGFIPDIFTYNTLISDLCKEGQFDE 438
           KKTEIDVVAYNVLIHGLCLNQDKK A   V DM+KRGF+PDIFTYNTLIS  CKEGQF +
Sbjct: 241 KKTEIDVVAYNVLIHGLCLNQDKKSALSYVADMLKRGFLPDIFTYNTLISAFCKEGQFGD 300

Query: 439 VYYIHDVMSRMGVSPDHISYKMIIQGLCIHGDAIKANEFLHSMLEKSMVPEPRIWNLIID 498
            YYIHDVMSRMGVSPD I YKMIIQ LC++GDAIKA+EFLHSMLEKSMVP+P IWNLIID
Sbjct: 301 AYYIHDVMSRMGVSPDQILYKMIIQALCMNGDAIKADEFLHSMLEKSMVPDPHIWNLIID 360

Query: 499 CYGRYGDLSNAISIRDQMLATGVLPNVFTYNALIHAQVKGGNIFNAYSLKKDMLLLGHFP 558
           CYGRYG LSNAIS R+QML  GV PNVFTYNALIHAQV+GGNIF+AYSLKK+MLLLG FP
Sbjct: 361 CYGRYGYLSNAISTRNQMLVAGVQPNVFTYNALIHAQVRGGNIFSAYSLKKEMLLLGLFP 420

Query: 559 DVVTYNLLISGACKCGQIRSALQLYDEMLRKGYEPDKITYTELIRGHCICGDMKEAEDLF 618
           D+VTYNLLI+GACK GQIR ALQLYDEMLRKGYE DKITYTELI GHC+CG+MKEAEDLF
Sbjct: 421 DIVTYNLLINGACKHGQIRYALQLYDEMLRKGYEADKITYTELINGHCMCGEMKEAEDLF 480

Query: 619 MKLHRSGLPMDIVPFKIIFEKYHRIGESEMAFKFYQRW 657
            +LHRSGLPMDIVPFKIIFEKY +IGE  MA KFY+RW
Sbjct: 481 FQLHRSGLPMDIVPFKIIFEKYQKIGEPNMALKFYRRW 518

[Close]
BLAST of CmoCh05G006640 vs. NCBI nr
Match: gi|359495888|ref|XP_003635109.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X1 [Vitis vinifera])

HSP 1 Score: 661.8 bits (1706), Expect = 1.4e-186
Identity = 335/553 (60.58%), Postives = 415/553 (75.05%), Query Frame = 1 

Query: 95  NGALNFFKRDISRMFA-VFNGLSNIDAVARPDEDEDSLQPAIKSLMTTDGDHCELRFSAC 154
           N  +   K D++++FA VF+      A  RP    + L  A++ L+ + G+  ++     
Sbjct: 18  NACIESIKHDVAQIFANVFSFKPYSPANNRPSGHGNLLPFALEDLIISVGNQYQVTTQDW 77

Query: 155 FSEKRNFDGESDPQAVFNVLDALLRGSLDRLKAMRESICLAKSGLQKCLWEAVQQPDYT- 214
           FS+ +  D E DP+ VFNVLDA+L+ SL+RLK MRES+ L K GL  C  E     DYT 
Sbjct: 78  FSQNKGHDEERDPRVVFNVLDAILKDSLERLKMMRESVSLTKIGLNGCTLEM----DYTG 137

Query: 215 --AMVRDLCLKGKLGAALLLRRKLIRQGFVVDLLTHNYLLNGLCINCDMEIADSLFREML 274
             AM+R+LCL+GKL AAL LR K+I++G + D+LTHNYL+NGLC   D+E AD+L REML
Sbjct: 138 CVAMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREML 197

Query: 275 ESGPSPSCATYNIIIKGFCLHRNMDKALDLFYTMANNGIKPSRITYNILLHALCKRGILE 334
           E GPSP+CAT+N  IKG+CL+ N+DKAL LF TMAN+GI P+++TYNIL+HALCK+G+L+
Sbjct: 198 EIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLK 257

Query: 335 DARKLLEDILDDDI-KTTDDAITSTILMDGFFKGGDMVQAISLWSEMVEKKTEIDVVAYN 394
           DARKLLE ILDDD  K T D ITSTI MDG  K GDMVQA+  W EM+++ T+IDVVAYN
Sbjct: 258 DARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYN 317

Query: 395 VLIHGLCLNQDKKIAFGCVVDMIKRGFIPDIFTYNTLISDLCKEGQFDEVYYIHDVMSRM 454
           VLIHG CL QD   A+    +M KRG +PDIFTYNTLIS  CK G  DE  YIH VMS+M
Sbjct: 318 VLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKM 377

Query: 455 GVSPDHISYKMIIQGLCIHGDAIKANEFLHSMLEKSMVPEPRIWNLIIDCYGRYGDLSNA 514
           G +PD ISYKMIIQGLCIHGD I+AN+FL  MLE  MVPEP IWN++ID +GR+GDLSNA
Sbjct: 378 GAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNA 437

Query: 515 ISIRDQMLATGVLPNVFTYNALIHAQVKGGNIFNAYSLKKDMLLLGHFPDVVTYNLLISG 574
           +SIRDQM++ G+ PNVFTYNALIHAQ+KGGNI +A+S+KK+MLL G +PDVVTYNLLI  
Sbjct: 438 LSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGA 497

Query: 575 ACKCGQIRSALQLYDEMLRKGYEPDKITYTELIRGHCICGDMKEAEDLFMKLHRSGLPMD 634
           AC  G+I  AL+LYDEMLR+GYEPD ITYTELIRG CI G + EAE+L  KL RSGL +D
Sbjct: 498 ACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSID 557

Query: 635 IVPFKIIFEKYHR 643
             PF+I+ +KY R
Sbjct: 558 HAPFQILIQKYCR 566

The following BLAST results are available for this feature:
BLAST of CmoCh05G006640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP396_ARATH3.4e-15348.03Pentatricopeptide repeat-containing protein At5g24830 OS=Arabidopsis thaliana GN... [more]
PPR91_ARATH5.0e-6431.09Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... [more]
PP437_ARATH8.0e-6232.13Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th... [more]
PP376_ARATH1.0e-6130.63Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidop... [more]
PP445_ARATH1.4e-6130.33Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN... [more]
BLAST of CmoCh05G006640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPD4_CUCSA5.8e-28582.82Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379150 PE=4 SV=1[more]
W9QZ27_9ROSA1.2e-17653.73Uncharacterized protein OS=Morus notabilis GN=L484_014894 PE=4 SV=1[more]
B9SPQ9_RICCO3.4e-17656.84Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
V4WAK2_9ROSI5.7e-17654.55Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007859mg PE=4 SV=1[more]
A0A067FIR5_CITSI5.7e-17654.55Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008249mg PE=4 SV=1[more]
BLAST of CmoCh05G006640 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G24830.11.9e-15448.03 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G62670.12.8e-6531.09 rna processing factor 2[more]
AT5G59900.14.5e-6332.13 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G12100.15.9e-6330.63 pentatricopeptide (PPR) repeat-containing protein[more]
AT5G65560.17.7e-6330.33 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CmoCh05G006640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778672271|ref|XP_011649772.1|8.3e-28582.82PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X1 [Cuc... [more]
gi|659088663|ref|XP_008445100.1|2.0e-28382.82PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X1 [Cuc... [more]
gi|778672274|ref|XP_011649773.1|8.3e-26184.36PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X2 [Cuc... [more]
gi|659088665|ref|XP_008445101.1|3.2e-26084.56PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X2 [Cuc... [more]
gi|359495888|ref|XP_003635109.1|1.4e-18660.58PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X1 [Vit... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G006640.1CmoCh05G006640.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 245..273
score: 4.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 492..534
score: 1.1E-8coord: 558..606
score: 1.9E-18coord: 418..466
score: 2.2E-13coord: 349..396
score: 1.9E-11coord: 276..325
score: 4.4
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 492..525
score: 5.2E-6coord: 596..629
score: 1.5E-5coord: 245..278
score: 3.9E-6coord: 526..560
score: 3.9E-4coord: 456..488
score: 0.0014coord: 561..594
score: 3.6E-10coord: 354..384
score: 2.8E-5coord: 386..420
score: 3.4E-4coord: 280..312
score: 8.2E-9coord: 421..454
score: 2.3E-7coord: 314..345
score: 3.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 559..593
score: 14.524coord: 629..663
score: 5.645coord: 242..276
score: 10.567coord: 419..453
score: 12.902coord: 384..418
score: 9.953coord: 312..346
score: 10.753coord: 207..241
score: 7.158coord: 454..488
score: 9.712coord: 349..383
score: 9.175coord: 277..311
score: 11.904coord: 594..628
score: 11.06coord: 524..558
score: 9.471coord: 489..523
score: 10
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 319..380
score: 1.9E-5coord: 488..655
score: 1.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 210..670
score: 8.1E
NoneNo IPR availablePANTHERPTHR24015:SF586SUBFAMILY NOT NAMEDcoord: 210..670
score: 8.1E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 247..387
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh05G006640Cucsa.161890Cucumber (Gy14) v1cgycmoB0461
CmoCh05G006640CmaCh12G002820Cucurbita maxima (Rimu)cmacmoB202
CmoCh05G006640CmaCh05G006390Cucurbita maxima (Rimu)cmacmoB786
CmoCh05G006640Csa2G379150Cucumber (Chinese Long) v2cmocuB778
CmoCh05G006640MELO3C011202Melon (DHL92) v3.5.1cmomeB719
CmoCh05G006640CSPI02G22900Wild cucumber (PI 183967)cmocpiB783
CmoCh05G006640Cp4.1LG11g05580Cucurbita pepo (Zucchini)cmocpeB720
CmoCh05G006640Cp4.1LG07g01950Cucurbita pepo (Zucchini)cmocpeB754
CmoCh05G006640MELO3C011202.2Melon (DHL92) v3.6.1cmomedB816
CmoCh05G006640CsaV3_2G031530Cucumber (Chinese Long) v3cmocucB0919
CmoCh05G006640Cla97C08G156040Watermelon (97103) v2cmowmbB800
CmoCh05G006640Bhi04G000852Wax gourdcmowgoB0947
CmoCh05G006640CsGy2G022650Cucumber (Gy14) v2cgybcmoB239
CmoCh05G006640Carg03874Silver-seed gourdcarcmoB1320
CmoCh05G006640Carg08323Silver-seed gourdcarcmoB0087
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh05G006640CmoCh12G002350Cucurbita moschata (Rifu)cmocmoB159
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh05G006640Cucurbita moschata (Rifu)cmocmoB151
CmoCh05G006640Cucurbita moschata (Rifu)cmocmoB373
CmoCh05G006640Cucurbita maxima (Rimu)cmacmoB194
CmoCh05G006640Cucurbita maxima (Rimu)cmacmoB486
CmoCh05G006640Watermelon (Charleston Gray)cmowcgB713
CmoCh05G006640Watermelon (97103) v1cmowmB746
CmoCh05G006640Cucurbita pepo (Zucchini)cmocpeB733
CmoCh05G006640Cucurbita pepo (Zucchini)cmocpeB747
CmoCh05G006640Bottle gourd (USVL1VR-Ls)cmolsiB728
CmoCh05G006640Silver-seed gourdcarcmoB1318