CmoCh05G002500 (gene) Cucurbita moschata (Rifu)

NameCmoCh05G002500
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionChloroplast thylakoid membrane
LocationCmo_Chr05 : 1071079 .. 1076563 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGATATTTTTCAAGGAAAAAAAAAATTGGTTCAGTTCAATAATCATAATTCATTACTCGGAAGCATCGCCGTTCTCCGACCATGACAACGATCGGATTCCGCCTTATCTCGGTTCCATCCGCCGTCTCACCACTCTCTCTACTTTCTCATGAACCGAGGGATGATCAAAGCCAAGCGCTACGCCATAACCTTCCGGTTACAACATCTCGCCGAGGTCTCACTATGCTCTCATTTCTCTCTGCGATGCCGTCTCTGTTTCTACCTGCTCCCGCCACTGCTTTCGATATCGGCATTTGTAAGCACAGAACGCAACGTTGTTTCATTAATTGCTTTGTTTTTCTTGTGTTTATTTTTTCTTCCTGGAGCCCTAGTTTTATCGGTTTGCCTGCAGCAGGACCAAAGGATTGGCTGAGGGAGCAGAAGAAGAAGGCCTCCAGGTTCCTCTTGGCTCCAATTGAGGCCTCCAGAGACAGCCTTCACGCAGTTTACCTTATGCTTTGTAAGTCTTTTTCACCGTCTCTTGTTTATCCTTTATCTCTTTGTTTCGGTATTTGCTTACATCGTCTCCGCTTGCAGCCAATGGTTCCGATTACTCAAACAAGGATATGGAGGACGTTCAAAGAATGCTGAAGTCTGCTGCAAGGGATTGCGTTTTGAAGGACAGGAATTCGTTCGTTCAATTCCAAGCGAGCACTGGAGTCGAGGTTCGATCTCCTAACGTTGCTTATGTTTCTCTCTGTATTCGTTTTGAATTCATTGCGTTTGTGAACCAGGATTTATCCAAATATAAAGTACAATTCAAATTATTATTTTAGCATCCTATGTCGCTACTCATAGAATTTGTTGAAGTATAAACTTAATTCACATCGAACAAGGTTAGATATGTTGAAATTTTCTTCCTATATCTTAGCTTGAACGATCTTTGGTCTCGATTTTTTTAATTCTGCAGGTCTGTACATTTCAATTGATTGTGAAAAATGCCGCCTCCTTGCTTGGAAACGAAGATCCTATAAAACTAGAAGCTGAAAGTCGATTAAAAGATCTAGTAAGGTAACCTCCATTTCATTTGCTGGTGCCTGTTATATTATTTCTTCAACTGGATAATGCTTTGATTTTGATAAGTAATCCGTACTTCTTTGGTCGTTTAGTTTTATAAGATAAGCTGCTTTACTTTTATCTGTATAGAGGACGGAACGAATAAAGATTAAATTCGTAAGGGCTCAGATAAAAAAAGTTCCAACAAAGTTGCAGAGCTGTATTATATCTTCTCTTTCAATAATCTAACAGTTATTAGTTTTGTTTCTACTGGTTGTCAATTGTAATCTTTTCTCGCACTTCTGATGCAGCTCGTTCACTTCTCTTAATAGTCTTGCATATGAGACTGATATTCAAGTCAATTCCAACAGGTACGTCCTCATTTGAAGGCTCAAATAAAGTTTATCTTGACAATTACTTGTCTCATCTCAAATCAGGATTTTAATAGAGAAATACAATTACTTAATAATTAGATTATCCAAAATGTCAGATTTCCTTCCACATACTTTATGTGGCTGCTGGCCGCGTGATCCTTTTTTCCAATCTAGGCAGTTGAGTTAGTAGGTTGGCCATTTGCTTTATTACATGACTTGCATAAATCTCAAGACTAATGTGGATTGGTAGAGACGTGAAACTAGATATAGATTCTGTGGGAATTTGTACTTTGGGAGTGCATAATTGACACTCAACACTAGATCTTCCTAGAGGGTAGCAATGCTGTAAGATTGAAGAATCCATGGCACTGATGGAAATGTAGTTTGGTTTCAAGGCCAGTACAGCCGTGGAACTCAGATACAATATTCTCTTGACTTTAACTAAGTGAAGCTCATTCACACTGCTTTATATATTTCATGTTGTCGGGCTCTTTTCCTGTGAATTTAGGCACAAAAAGTTTTGGTAACCTAAACCTCTTTCCTTGTATACTTATTTTCTTTCTTTCTTCCCCTTCTTTTTTCTTTTTATTGCAGACAAAAAGTACTGGATGCAGTAAATGATACCATAGATTCCCTCGACAAATTCGAGAAGGGTATTAAGGATTGTCTTGAAACTTAAGTCCCGTGATTTTGTTTTGTAATTAGATTTTCTTATGTTAAGTCCAAACAAACAACAATTAAATGAAGCCAAAAGCAAAGTTTTTAAGCTCATTCTCTAGCTTCTTTAGTGCTAAATCTAGTGCTTGAAAGTTGAATGCATATGTACCCACCCTATCATATATGTGCTTATGTGTGCGTGTATGTGCATGTTCATATTTAGTTTGGTGGAATTATTATATATCTTGAAAATCTGGGAGTGTAATACGCTATCAAGATATTTATAAGTAAATCCATTCGTTTTGACAGTCATATGTTATCATTATTATACTAACAAAGACAGACATTTCATGTGCTCTCAGAACACCATTTCTCTCTGTTAGCAAGTGATAGTAGCTAACTTTCATCTATTGGGCAGTCCTTGCGATTCTTTTGATGCTTTCAACGTTATCATTTCTTCCTACAGAACCATGGTATATACAAAATTAATATCCAACTCTTAGAGTTTATAACCATTGAAAATCAGGGATAAAATAACTATTTGCCGATGATTTTGCCATTTGGTGATGTAAAAATTTTCACTTGTGGCAAATGATTGAGTTGTTACAAGAGATTCCAGTTAATTATTATAAGTTCAGTTTCCTAGGCTCTTTTCATTGGCATAGTAGACTATTTCGGGAAAGATGTTTGCATAGGTGATTTCTTTTCACATGCATAAGTCTGAACGTTATAGTGGAATGCTTGTAATCTACTTCTTTCAGAATGCACAATTTAGGTTCAAGTTTGTTCTAATTGCATAGTTTACACATGACATACTCGAATTCCACATGTATAGCTACACCTCTGATATGGTATGGTGTAGAAACCTTGGGCAGTATAATACGACATGCTCTCCTTGGAATAGTTGTAATAGGTAGCAGGTAGATATGACGTCTGACATTCATCCAACCTACTCACTCAGAGATTTTCTTACTTGTGGGTTGTCTTTATGGGACGGTTGTAGCTGAGGTGAGCCAGAAGCCTGTACCAAGTACAAGCGGCAGCAAGGTTTTCCATCATCAGGGTGAGTCTGCAATGACCTAGGTAGACTGCGGATTTTATTGAAGAGATTTAATGGATCGTGCATAAGCCCAAAGTGTGCATCCATATCTCCAATCTGTGATAGTGTAGTGTTGGAAAATCCAAGGGACGGAAGTAGATGATCAGGCCAATCGCAGTAGAAATGGAAGACAGAATTTGAAAGAGTGGTTGATGGCTTGTTCATAAAATCTGCTAAGAGGACTGTGTGGGTTATGGTGCATTGGTCAGCTATTGTCTCCAACACTTGCAGCGCCTGGGAATGGGTAAGATAGTAGAGTAATCCTTCTAGAACCCACACTGTATTCTTCTCTGATGCAAAACCAGCTGTTTTAAGCTTTTCAAGCCAGTCATTACTTCTGATATCAGCTGCTACTCTGTTTAACGATTTTGCTTTTTGTTGATGATGATGCCCGTTTGGAGGTTCTATTGCAGCCTTTAGAAGAGTGGCTTTCGCTTGCAACAACTCAGAGAAATCAACTTCAAAAACGTCACTTTCCTTCAAGCAACTTAATCTGTAAGCCCTCGTATCCATTCCTACATTATAAATGCGATCTCTATTATTTGAACTACAAACAGAACTTCAATTGTAGTCTAATATATACTTCCTCCCTTAAAACTCAAATATTTCAGATGCAGCTGCAAATAATTCTCTTTGACTAAGCATACAGTTCCCATTTTGGTAGTTTTGATGGCCTCATTTTTAGTCACTAAATAGGTTGCCGTGGTTATCTATCATTAACTAGCGTTTTAGCCTGCCCTCTCCCCCACTGCAACCCCACCAAAGACGAAAGAGGAAAAAAGAGATAGAGAACGACAAGAAAAATAAAAAGGACTACGCACTTTTCTTAGATATCATTGTGTGAGATTCTAATTTCACTACTTCCCTTATTTTTCAGTTCTAAAATGCCTAGTGCCAACCCTGATTAGGACTCGTTTTGTTTGAAAAGAAAAACAGGGTCGTTATTTGTGCTGTTGGCTATGGCTATCTTCTACTGCTATGGTTGGGACCCTCTTAATGCAGTATGAAGTTTAACTAATTGCAGCTTCTGGGAGTTGAACCAACCTGCACCAAGGAGAACGACCTGTGAATCTCTGCCACTGATGGATGTCAGAGCACCTTCAATTTTTGAATCAAACCAGAGAGTGCGAACAGCAAGAATCACTCCAGAAATCTCTCTTGCATTGTTGCTTCGATCTTTCTTTATTTTCTCATAAAGGTTTCTTAGGCATGCTTCTCCAGCCAGTAACTCTGCCAGTGGATCATGGATCATGTGCTTCCAAAGCGCTCTTCCTGCTGCCATTTGACATGCCGAGCGTTGGAGGTAATCCCATTCAGCCTCAATTCTGGCATGGATTTCACGTACACTGTCTACCAATAACAAATCTGGAAGCTTTAGCTCAGACCATCCTGGGTTGTCTGGCCAACCATTCTCTTTATCAGTCATGCTTCGATTATAAAACGGGCTGTTAGAATTGATAAGAAATAGGGAAGTAGATAATGCGTTCTGTTTTTGTAGGAACAAGGTGTGCGCAAGGAAAAAGAGCAGGATTTTATGGAATGGGATAAGGAAAGAGAGCCACAACAACCAATGCTTAAAAAAAAAGCTCAATTTAATGATAAGGGAGAGTGAGTATATAAGTTCCACGAGTGCGTTAAATCTCGTATTTTTGCTCTCTCTCTCTCTCTATTGTGGATTCTTTTGTGCTGTCTTTCATCAGAAGAGAAGAGGAAGAGGGCTCCACTGAAAAAGACGCGCGATCACATTTGAGTGGCTCATAGCTCGGATATTGAAATTGCCATACTACTTCAGTAATACCAGGTACCTTTGTTTTTATTCATTTACATGGCAAATGTTTTTCTGATTCTGATTCTTCTGCACGTGGCCGTTAATTCTCCATTCCTTTAAGGCCTGTTTGGCTCTCAGAGAGAGATATTTTTCCGTAGTTCTGGCTGAAGGCAAGGTATTGATTGGTTAGTTATTGGGCCATCCTATTTGGGGCGAAGGGATATTGGATATCGCTTAAGATCTTACCTCTCTAGTTTGTATTCGAAGTTGGATAATTAAAACTTTTCAAGTGGAGTATACAAATTTGAATCTCCAGATGGAGAGGAAGCCAGGTGTTTTTTTTTTCTTGAAGTACTTAGTTGGATTAGTTTAGGTTAAATATTGATTTAGATATTTAAATGGTTTTGTTGTTTGTTTTGATCCAACCGATTATTTACCTACATGTGTTTAAGTGTATGTAGTTATTTATTTATTTAAGATTGATTGACAACTTTATTTCACTTGTTAATGTTTAAAAGTATTCTTTAACTTGTAGTTAAATTTTTAAGAGAG

mRNA sequence

GGATATTTTTCAAGGAAAAAAAAAATTGGTTCAGTTCAATAATCATAATTCATTACTCGGAAGCATCGCCGTTCTCCGACCATGACAACGATCGGATTCCGCCTTATCTCGGTTCCATCCGCCGTCTCACCACTCTCTCTACTTTCTCATGAACCGAGGGATGATCAAAGCCAAGCGCTACGCCATAACCTTCCGGTTACAACATCTCGCCGAGGTCTCACTATGCTCTCATTTCTCTCTGCGATGCCGTCTCTGTTTCTACCTGCTCCCGCCACTGCTTTCGATATCGGCATTTCAGGACCAAAGGATTGGCTGAGGGAGCAGAAGAAGAAGGCCTCCAGGTTCCTCTTGGCTCCAATTGAGGCCTCCAGAGACAGCCTTCACGCAGTTTACCTTATGCTTTCCAATGGTTCCGATTACTCAAACAAGGATATGGAGGACGTTCAAAGAATGCTGAAGTCTGCTGCAAGGGATTGCGTTTTGAAGGACAGGAATTCGTTCGTTCAATTCCAAGCGAGCACTGGAGTCGAGGTCTGTACATTTCAATTGATTGTGAAAAATGCCGCCTCCTTGCTTGGAAACGAAGATCCTATAAAACTAGAAGCTGAAAGTCGATTAAAAGATCTAGTAAGCTCGTTCACTTCTCTTAATAGTCTTGCATATGAGACTGATATTCAAGTCAATTCCAACAGACAAAAAGTACTGGATGCAGTAAATGATACCATAGATTCCCTCGACAAATTCGAGAAGGGTATTAAGGATTGTCTTGAAACTTAAGTCCCGTGATTTTGTTTTGTAATTAGATTTTCTTATGTTAAGTCCAAACAAACAACAATTAAATGAAGCCAAAAGCAAAGTTTTTAAGCTCATTCTCTAGCTTCTTTAGTGCTAAATCTAGTGCTTGAAAGTTGAATGCATATGTACCCACCCTATCATATATGTGCTTATGTGTGCGTGTATGTGCATGTTCATATTTAGTTTGGTGGAATTATTATATATCTTGAAAATCTGGGAGTGTAATACGCTATCAAGATATTTATAAGTAAATCCATTCGTTTTGACAGTCATATGTTATCATTATTATACTAACAAAGACAGACATTTCATGTGCTCTCAGAACACCATTTCTCTCTGTTAGCAAGTGATAGTAGCTAACTTTCATCTATTGGGCAGTCCTTGCGATTCTTTTGATGCTTTCAACGTTATCATTTCTTCCTACAGAACCATGGTATATACAAAATTAATATCCAACTCTTAGAGTTTATAACCATTGAAAATCAGGGATAAAATAACTATTTGCCGATGATTTTGCCATTTGGTGATGTAAAAATTTTCACTTGTGGCAAATGATTGAGTTGTTACAAGAGATTCCAGTTAATTATTATAAGTTCAGTTTCCTAGGCTCTTTTCATTGGCATAGTAGACTATTTCGGGAAAGATGTTTGCATAGGTGATTTCTTTTCACATGCATAAGTCTGAACGTTATAGTGGAATGCTTGTAATCTACTTCTTTCAGAATGCACAATTTAGGTTCAAGTTTGTTCTAATTGCATAGTTTACACATGACATACTCGAATTCCACATGTATAGCTACACCTCTGATATGGTATGGTGTAGAAACCTTGGGCAGTATAATACGACATGCTCTCCTTGGAATAGTTGTAATAGGTAGCAGGTAGATATGACGTCTGACATTCATCCAACCTACTCACTCAGAGATTTTCTTACTTGTGGGTTGTCTTTATGGGACGGTTGTAGCTGAGGTGAGCCAGAAGCCTGTACCAAGTACAAGCGGCAGCAAGGTTTTCCATCATCAGGGTGAGTCTGCAATGACCTAGGTAGACTGCGGATTTTATTGAAGAGATTTAATGGATCGTGCATAAGCCCAAAGTGTGCATCCATATCTCCAATCTGTGATAGTGTAGTGTTGGAAAATCCAAGGGACGGAAGTAGATGATCAGGCCAATCGCAGTAGAAATGGAAGACAGAATTTGAAAGAGTGGTTGATGGCTTGTTCATAAAATCTGCTAAGAGGACTGTGTGGGTTATGGTGCATTGGTCAGCTATTGTCTCCAACACTTGCAGCGCCTGGGAATGGCCTTTAGAAGAGTGGCTTTCGCTTGCAACAACTCAGAGAAATCAACTTCAAAAACGTCACTTTCCTTCAAGCAACTTAATCTATGCAGCTGCAAATAATTCTCTTTGACTAAGCATACAGTTCCCATTTTGGTAGTTTTGATGGCCTCATTTTTAGTCACTAAATAGGTTGCCGTGGTTATCTATCATTAACTAGCGTTTTAGCCTGCCCTCTCCCCCACTGCAACCCCACCAAAGACGAAAGAGGAAAAAAGAGATAGAGAACGACAAGAAAAATAAAAAGGACTACGCACTTTTCTTAGATATCATTGTAAAAACAGGGTCGTTATTTGTGCTGTTGGCTATGGCTATCTTCTACTGCTATGGTTGGGACCCTCTTAATGCAGTATGAAGTTTAACTAATTGCAGCTTCTGGGAGTTGAACCAACCTGCACCAAGGAGAACGACCTGTGAATCTCTGCCACTGATGGATGTCAGAGCACCTTCAATTTTTGAATCAAACCAGAGAGTGCGAACAGCAAGAATCACTCCAGAAATCTCTCTTGCATTGTTGCTTCGATCTTTCTTTATTTTCTCATAAAGGTTTCTTAGGCATGCTTCTCCAGCCAGTAACTCTGCCAGTGGATCATGGATCATGTGCTTCCAAAGCGCTCTTCCTGCTGCCATTTGACATGCCGAGCGTTGGAGGTAATCCCATTCAGCCTCAATTCTGGCATGGATTTCACGTACACTGTCTACCAATAACAAATCTGGAAGCTTTAGCTCAGACCATCCTGGGTTGTCTGGCCAACCATTCTCTTTATCAGTCATGCTTCGATTATAAAACGGGCTGTTAGAATTGATAAGAAATAGGGAAGTAGATAATGCGTTCTGTTTTTGTAGGAACAAGGTGTGCGCAAGGAAAAAGAGCAGGATTTTATGGAATGGGATAAGGAAAGAGAGCCACAACAACCAATGCTTAAAAAAAAAGCTCAATTTAATGATAAGGGAGAGTGAGTATATAAGTTCCACGAGTGCGTTAAATCTCGTATTTTTGCTCTCTCTCTCTCTCTATTGTGGATTCTTTTGTGCTGTCTTTCATCAGAAGAGAAGAGGAAGAGGGCTCCACTGAAAAAGACGCGCGATCACATTTGAGTGGCTCATAGCTCGGATATTGAAATTGCCATACTACTTCAGTAATACCAGGTACCTTTGTTTTTATTCATTTACATGGCAAATGTTTTTCTGATTCTGATTCTTCTGCACGTGGCCGTTAATTCTCCATTCCTTTAAGGCCTGTTTGGCTCTCAGAGAGAGATATTTTTCCGTAGTTCTGGCTGAAGGCAAGGTATTGATTGGTTAGTTATTGGGCCATCCTATTTGGGGCGAAGGGATATTGGATATCGCTTAAGATCTTACCTCTCTAGTTTGTATTCGAAGTTGGATAATTAAAACTTTTCAAGTGGAGTATACAAATTTGAATCTCCAGATGGAGAGGAAGCCAGGTGTTTTTTTTTTCTTGAAGTACTTAGTTGGATTAGTTTAGGTTAAATATTGATTTAGATATTTAAATGGTTTTGTTGTTTGTTTTGATCCAACCGATTATTTACCTACATGTGTTTAAGTGTATGTAGTTATTTATTTATTTAAGATTGATTGACAACTTTATTTCACTTGTTAATGTTTAAAAGTATTCTTTAACTTGTAGTTAAATTTTTAAGAGAG

Coding sequence (CDS)

ATGACAACGATCGGATTCCGCCTTATCTCGGTTCCATCCGCCGTCTCACCACTCTCTCTACTTTCTCATGAACCGAGGGATGATCAAAGCCAAGCGCTACGCCATAACCTTCCGGTTACAACATCTCGCCGAGGTCTCACTATGCTCTCATTTCTCTCTGCGATGCCGTCTCTGTTTCTACCTGCTCCCGCCACTGCTTTCGATATCGGCATTTCAGGACCAAAGGATTGGCTGAGGGAGCAGAAGAAGAAGGCCTCCAGGTTCCTCTTGGCTCCAATTGAGGCCTCCAGAGACAGCCTTCACGCAGTTTACCTTATGCTTTCCAATGGTTCCGATTACTCAAACAAGGATATGGAGGACGTTCAAAGAATGCTGAAGTCTGCTGCAAGGGATTGCGTTTTGAAGGACAGGAATTCGTTCGTTCAATTCCAAGCGAGCACTGGAGTCGAGGTCTGTACATTTCAATTGATTGTGAAAAATGCCGCCTCCTTGCTTGGAAACGAAGATCCTATAAAACTAGAAGCTGAAAGTCGATTAAAAGATCTAGTAAGCTCGTTCACTTCTCTTAATAGTCTTGCATATGAGACTGATATTCAAGTCAATTCCAACAGACAAAAAGTACTGGATGCAGTAAATGATACCATAGATTCCCTCGACAAATTCGAGAAGGGTATTAAGGATTGTCTTGAAACTTAA
BLAST of CmoCh05G002500 vs. TrEMBL
Match: A0A0A0LPA8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361670 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.8e-102
Identity = 197/230 (85.65%), Postives = 212/230 (92.17%), Query Frame = 1

Query: 1   MTTIGFRLISVPSAVSPLSLLSHEPRDDQSQALRHNLPVTTSRRGLTMLSFLSAMPSLFL 60
           MTTIGFRLISV +AVSP S   +  +  + Q LRH LP+TTSRRGLTMLSF+SA+PSLFL
Sbjct: 1   MTTIGFRLISVSAAVSPPSQSPNNDQFQECQPLRHQLPITTSRRGLTMLSFISAVPSLFL 60

Query: 61  PAPATAFDIGISGPKDWLREQKKKASRFLLAPIEASRDSLHAVYLMLSNGSDYSNKDMED 120
           PAPA+AFDIGISGPKDWL+EQKKKAS+FLLAPIEASRDSL AVYL+LSN SDYS+KDMED
Sbjct: 61  PAPASAFDIGISGPKDWLKEQKKKASKFLLAPIEASRDSLQAVYLLLSNDSDYSSKDMED 120

Query: 121 VQRMLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNAASLLGNEDPIKLEAESRLK 180
           VQR+LKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNAASLLGN DPIKLEAES LK
Sbjct: 121 VQRLLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNAASLLGNRDPIKLEAESLLK 180

Query: 181 DLVSSFTSLNSLAYETDIQVNSNRQKVLDAVNDTIDSLDKFEKGIKDCLE 231
           DLVSSFTSLNSL YETDIQVNSNRQKVLDA+NDT+ SLDKFEKGIKDCLE
Sbjct: 181 DLVSSFTSLNSLTYETDIQVNSNRQKVLDALNDTMTSLDKFEKGIKDCLE 230

BLAST of CmoCh05G002500 vs. TrEMBL
Match: W9RSU4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001599 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 8.5e-68
Identity = 145/234 (61.97%), Postives = 175/234 (74.79%), Query Frame = 1

Query: 5   GFRLISVPSAVSPLSLLSHEPRDDQSQAL-----RHNL--PVTTSRRGLTMLSFLSAMPS 64
           G RLIS P+  SP    S  P +     L      H L  P+  SRR L  LSFLS  PS
Sbjct: 204 GHRLISRPA--SPFPAFSSLPSNSNPPPLFPKEHHHRLQPPIAISRRDLASLSFLSLFPS 263

Query: 65  LFLPAPATAFDIGISGPKDWLREQKKKASRFLLAPIEASRDSLHAVYLMLSN-GSDYSNK 124
           LF PAPATAF IGISGPKDWL+EQKKKAS+FLLAPI+ASR SLH  YL+L+   SDYSNK
Sbjct: 264 LFRPAPATAFSIGISGPKDWLKEQKKKASKFLLAPIDASRQSLHTAYLLLTTKDSDYSNK 323

Query: 125 DMEDVQRMLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNAASLLGNEDPIKLEAE 184
           DME++Q +L+SAARDCV  +RNSFV FQA+TGVEVCTF+LIVKNA+SLL N+DP+KL+AE
Sbjct: 324 DMEEIQNLLRSAARDCVPGERNSFVAFQANTGVEVCTFRLIVKNASSLLQNKDPVKLQAE 383

Query: 185 SRLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDAVNDTIDSLDKFEKGIKDCLE 231
           + L  L+ SFTSL  +A + DI++ S RQ++ D++  TI SLDKFE+GIKDCLE
Sbjct: 384 AILNYLIRSFTSLQDVANQADIKLPSERQRIADSLMATISSLDKFEQGIKDCLE 435

BLAST of CmoCh05G002500 vs. TrEMBL
Match: A0A0D2NMF0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G127900 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.5e-64
Identity = 138/230 (60.00%), Postives = 175/230 (76.09%), Query Frame = 1

Query: 2   TTIGFRLISVPSAVSPLSLLSHEPRDDQSQALRHNLPVTTSRRGLTMLSFLSAMPSLFLP 61
           T  G   I     +S  SL  +   +++ + LR       SRR    LS +S  PSL   
Sbjct: 39  TVAGLPPILTKPPISNQSLSINPSEENRQKVLR-----LISRRDAAFLSLISLFPSLLHT 98

Query: 62  APATAFDIGISGPKDWLREQKKKASRFLLAPIEASRDSLHAVYLMLSNG-SDYSNKDMED 121
             A+AF IGISGPKDWL+EQK+K+S+FLLAPI+ASR SLH+VYL+L +  S  SN D+E+
Sbjct: 99  PHASAFSIGISGPKDWLKEQKRKSSKFLLAPIDASRQSLHSVYLLLMDKESTISNNDLEE 158

Query: 122 VQRMLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNAASLLGNEDPIKLEAESRLK 181
           VQ++LKSAARDCV+++RNSFV FQA+TGVEVCTF+LIVKNA+SLL N++P+KLEAE+ L 
Sbjct: 159 VQKLLKSAARDCVVQERNSFVAFQANTGVEVCTFRLIVKNASSLLENKNPVKLEAEAMLD 218

Query: 182 DLVSSFTSLNSLAYETDIQVNSNRQKVLDAVNDTIDSLDKFEKGIKDCLE 231
           DL+SSFTSLN+LA E+DIQV S+RQ+V DA+ DTI SLDKFE+GIKDCLE
Sbjct: 219 DLISSFTSLNTLANESDIQVASSRQRVADALKDTITSLDKFEQGIKDCLE 263

BLAST of CmoCh05G002500 vs. TrEMBL
Match: A0A061FDJ4_THECC (Chloroplast thylakoid membrane OS=Theobroma cacao GN=TCM_034041 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 3.7e-63
Identity = 131/209 (62.68%), Postives = 169/209 (80.86%), Query Frame = 1

Query: 22  SHEPRDDQSQALRHNLPVTTSRRGLTMLSFLSAMPSLFLPAPATAFDIGISGPKDWLREQ 81
           + E R +  + L + L +  SRR    L  +S  PSL  P+ A+AF IGISGPK+WL+EQ
Sbjct: 39  NQENRREDQRHLVNQLQI--SRRDAAFLFLISLFPSLCQPSHASAFSIGISGPKEWLKEQ 98

Query: 82  KKKASRFLLAPIEASRDSLHAVYLMLSNGSDYSNKDMEDVQRMLKSAARDCVLKDRNSFV 141
           K+K+S+FL+API+ASR SL + YL+L +    S KD+E+VQ++LKSAARDCV+++RNSFV
Sbjct: 99  KRKSSKFLVAPIDASRQSLRSAYLLLMDKE--STKDLEEVQKLLKSAARDCVVQERNSFV 158

Query: 142 QFQASTGVEVCTFQLIVKNAASLLGNEDPIKLEAESRLKDLVSSFTSLNSLAYETDIQVN 201
            FQASTGVEVCTF+LIVKNA+SLL +++P+KLEAE+ L DL+SSFTSLNSLA ETDIQV+
Sbjct: 159 AFQASTGVEVCTFRLIVKNASSLLEDKNPVKLEAEAMLDDLISSFTSLNSLANETDIQVS 218

Query: 202 SNRQKVLDAVNDTIDSLDKFEKGIKDCLE 231
           S+RQKV DA+ DTI SLDKFE+G+KDCLE
Sbjct: 219 SSRQKVADALMDTISSLDKFEQGVKDCLE 243

BLAST of CmoCh05G002500 vs. TrEMBL
Match: E0CQC9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g12500 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 3.7e-63
Identity = 136/240 (56.67%), Postives = 177/240 (73.75%), Query Frame = 1

Query: 1   MTTIGFRLI---SVPSAV----SPLSLLS--HEPRDDQSQALRHNLPVTTSRRGLTMLSF 60
           M   GF L+   S P+A+    SP+S     H+ + +Q Q         T RR   +LSF
Sbjct: 1   MAVTGFHLVAFSSSPNALFPPQSPISSKDDHHQQKQEQKQLQSSLFGFKTYRRDAALLSF 60

Query: 61  LSAMPSLFLPAPATAFDIGISGPKDWLREQKKKASRFLLAPIEASRDSLHAVYLMLS-NG 120
           L+ +P L   +PATA   GISGPKDWL+ QK+KAS+FLLAP++ASR+SL   YL+ + +G
Sbjct: 61  LALIPGLHRSSPATALTFGISGPKDWLKGQKRKASKFLLAPVDASRESLRTAYLLFTASG 120

Query: 121 SDYSNKDMEDVQRMLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNAASLLGNEDP 180
           S+  NKD+E+VQR+LKSAARDCV ++RNSFV FQA+TGVEVCTF+LI+KNAASLL ++DP
Sbjct: 121 SNDPNKDLEEVQRLLKSAARDCVPQERNSFVAFQATTGVEVCTFRLILKNAASLLDDKDP 180

Query: 181 IKLEAESRLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDAVNDTIDSLDKFEKGIKDCLE 231
           +KLEAE+ L DL+SSFTSL+ +  ETD++  S RQKV DA+ DTI SL+KFE+GIKDCLE
Sbjct: 181 VKLEAEAMLNDLISSFTSLDDVTNETDMEFASKRQKVADALMDTISSLNKFEQGIKDCLE 240

BLAST of CmoCh05G002500 vs. TAIR10
Match: AT5G42765.1 (AT5G42765.1 INVOLVED IN: biological_process unknown)

HSP 1 Score: 216.9 bits (551), Expect = 1.3e-56
Identity = 115/199 (57.79%), Postives = 151/199 (75.88%), Query Frame = 1

Query: 36  NLPVTTSRRGLTMLSFLSAMPSLFLPA----PATAFDIGISGPKDWLREQKKKASRFLLA 95
           +LP   SRR  T+L  LS+  SL L      PA AF +GISGPK+WL++QKKK+SRFLLA
Sbjct: 32  HLPQIISRRDATVL--LSSATSLLLTLSPTNPAFAFSLGISGPKEWLKDQKKKSSRFLLA 91

Query: 96  PIEASRDSLHAVYLMLSNGSDYSNKDMEDVQRMLKSAARDCVLKDRNSFVQFQASTGVEV 155
           PI+A+R +L + YL L++ SDY+ KD+E++Q + KS+ARDCV K+R+S V FQ+ +GVEV
Sbjct: 92  PIDATRQALQSAYLSLTSESDYTEKDLENLQNLFKSSARDCVPKERSSLVDFQSKSGVEV 151

Query: 156 CTFQLIVKNAASLLGNEDPIKLEAESRLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDAV 215
           CTF+L+VKNAASLL ++DP+KLEAE+ L DLV SF SL  L    D+ + S+R+KV D V
Sbjct: 152 CTFKLVVKNAASLLDDKDPVKLEAENILDDLVRSFGSLIVLTNGVDMNLPSDRKKVADGV 211

Query: 216 NDTIDSLDKFEKGIKDCLE 231
            +TI  LDKFEKG+KDCLE
Sbjct: 212 TETISYLDKFEKGVKDCLE 228

BLAST of CmoCh05G002500 vs. NCBI nr
Match: gi|659087941|ref|XP_008444717.1| (PREDICTED: uncharacterized protein LOC103487971 [Cucumis melo])

HSP 1 Score: 383.6 bits (984), Expect = 2.4e-103
Identity = 197/230 (85.65%), Postives = 214/230 (93.04%), Query Frame = 1

Query: 1   MTTIGFRLISVPSAVSPLSLLSHEPRDDQSQALRHNLPVTTSRRGLTMLSFLSAMPSLFL 60
           MTTIGFRL SVP+AVSP S   +  +  +SQ LRH LP+TTSRRGLTMLSF+SAMPSLFL
Sbjct: 1   MTTIGFRLFSVPAAVSPPSQSPNSDQFQESQTLRHQLPITTSRRGLTMLSFISAMPSLFL 60

Query: 61  PAPATAFDIGISGPKDWLREQKKKASRFLLAPIEASRDSLHAVYLMLSNGSDYSNKDMED 120
           PAPA+AFDIGISGPKDWL+EQKKK+S+FLLAPIEASRDSL  VYL+LSN SDYSNKDMED
Sbjct: 61  PAPASAFDIGISGPKDWLKEQKKKSSKFLLAPIEASRDSLQTVYLLLSNDSDYSNKDMED 120

Query: 121 VQRMLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNAASLLGNEDPIKLEAESRLK 180
           VQR+LKSAARDCVLKDR+SFVQFQASTGVEVCTFQLIVKNAASLLGN+DPIKLEAE+ LK
Sbjct: 121 VQRLLKSAARDCVLKDRSSFVQFQASTGVEVCTFQLIVKNAASLLGNKDPIKLEAENLLK 180

Query: 181 DLVSSFTSLNSLAYETDIQVNSNRQKVLDAVNDTIDSLDKFEKGIKDCLE 231
           DLVSSFTSLNSLAYETDIQVNSNRQKVLDA+NDT+ SLDKFEKGIKDCLE
Sbjct: 181 DLVSSFTSLNSLAYETDIQVNSNRQKVLDALNDTMTSLDKFEKGIKDCLE 230

BLAST of CmoCh05G002500 vs. NCBI nr
Match: gi|449469979|ref|XP_004152696.1| (PREDICTED: uncharacterized protein LOC101216764 [Cucumis sativus])

HSP 1 Score: 380.2 bits (975), Expect = 2.6e-102
Identity = 197/230 (85.65%), Postives = 212/230 (92.17%), Query Frame = 1

Query: 1   MTTIGFRLISVPSAVSPLSLLSHEPRDDQSQALRHNLPVTTSRRGLTMLSFLSAMPSLFL 60
           MTTIGFRLISV +AVSP S   +  +  + Q LRH LP+TTSRRGLTMLSF+SA+PSLFL
Sbjct: 1   MTTIGFRLISVSAAVSPPSQSPNNDQFQECQPLRHQLPITTSRRGLTMLSFISAVPSLFL 60

Query: 61  PAPATAFDIGISGPKDWLREQKKKASRFLLAPIEASRDSLHAVYLMLSNGSDYSNKDMED 120
           PAPA+AFDIGISGPKDWL+EQKKKAS+FLLAPIEASRDSL AVYL+LSN SDYS+KDMED
Sbjct: 61  PAPASAFDIGISGPKDWLKEQKKKASKFLLAPIEASRDSLQAVYLLLSNDSDYSSKDMED 120

Query: 121 VQRMLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNAASLLGNEDPIKLEAESRLK 180
           VQR+LKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNAASLLGN DPIKLEAES LK
Sbjct: 121 VQRLLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNAASLLGNRDPIKLEAESLLK 180

Query: 181 DLVSSFTSLNSLAYETDIQVNSNRQKVLDAVNDTIDSLDKFEKGIKDCLE 231
           DLVSSFTSLNSL YETDIQVNSNRQKVLDA+NDT+ SLDKFEKGIKDCLE
Sbjct: 181 DLVSSFTSLNSLTYETDIQVNSNRQKVLDALNDTMTSLDKFEKGIKDCLE 230

BLAST of CmoCh05G002500 vs. NCBI nr
Match: gi|703102090|ref|XP_010097367.1| (hypothetical protein L484_001599 [Morus notabilis])

HSP 1 Score: 265.0 bits (676), Expect = 1.2e-67
Identity = 145/234 (61.97%), Postives = 175/234 (74.79%), Query Frame = 1

Query: 5   GFRLISVPSAVSPLSLLSHEPRDDQSQAL-----RHNL--PVTTSRRGLTMLSFLSAMPS 64
           G RLIS P+  SP    S  P +     L      H L  P+  SRR L  LSFLS  PS
Sbjct: 204 GHRLISRPA--SPFPAFSSLPSNSNPPPLFPKEHHHRLQPPIAISRRDLASLSFLSLFPS 263

Query: 65  LFLPAPATAFDIGISGPKDWLREQKKKASRFLLAPIEASRDSLHAVYLMLSN-GSDYSNK 124
           LF PAPATAF IGISGPKDWL+EQKKKAS+FLLAPI+ASR SLH  YL+L+   SDYSNK
Sbjct: 264 LFRPAPATAFSIGISGPKDWLKEQKKKASKFLLAPIDASRQSLHTAYLLLTTKDSDYSNK 323

Query: 125 DMEDVQRMLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNAASLLGNEDPIKLEAE 184
           DME++Q +L+SAARDCV  +RNSFV FQA+TGVEVCTF+LIVKNA+SLL N+DP+KL+AE
Sbjct: 324 DMEEIQNLLRSAARDCVPGERNSFVAFQANTGVEVCTFRLIVKNASSLLQNKDPVKLQAE 383

Query: 185 SRLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDAVNDTIDSLDKFEKGIKDCLE 231
           + L  L+ SFTSL  +A + DI++ S RQ++ D++  TI SLDKFE+GIKDCLE
Sbjct: 384 AILNYLIRSFTSLQDVANQADIKLPSERQRIADSLMATISSLDKFEQGIKDCLE 435

BLAST of CmoCh05G002500 vs. NCBI nr
Match: gi|694378681|ref|XP_009365567.1| (PREDICTED: uncharacterized protein LOC103955406 [Pyrus x bretschneideri])

HSP 1 Score: 254.6 bits (649), Expect = 1.7e-64
Identity = 136/235 (57.87%), Postives = 175/235 (74.47%), Query Frame = 1

Query: 1   MTTIGFRLISVPSAVSPLSLLSHEPRDDQSQALRHNLP----VTTSRRGLTMLSFLSAMP 60
           M     R+IS  S+ +  ++ S  P+     +  H  P       SRR + +LS ++ +P
Sbjct: 1   MAVASRRIISSSSSSTVTAISSFPPKLKTLISNPHASPNLQLPKRSRRDVALLSLIALIP 60

Query: 61  SLFLPAPATAFDIGISGPKDWLREQKKKASRFLLAPIEASRDSLHAVY-LMLSNGSDYSN 120
           SL  P PA+    GISGPKDWLREQKKKASRFLLAPI+ASR+SL A + L+ +  SDY+N
Sbjct: 61  SLVRPDPASGLSFGISGPKDWLREQKKKASRFLLAPIDASRESLVAAHQLLTATNSDYTN 120

Query: 121 KDMEDVQRMLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNAASLLGNEDPIKLEA 180
           K+ME+VQR+ +SAARDCV++DRNSFV FQA+TGVEVCTF L+VKNA+SLLG++DP+KLEA
Sbjct: 121 KEMEEVQRLFRSAARDCVVEDRNSFVAFQANTGVEVCTFLLVVKNASSLLGDKDPVKLEA 180

Query: 181 ESRLKDLVSSFTSLNSLAYETDIQVNSNRQKVLDAVNDTIDSLDKFEKGIKDCLE 231
           ES L DL+ SFTSLN L  ETD+Q ++ R+KV D++ DTI SLDKFE+GIKDCLE
Sbjct: 181 ESLLNDLIRSFTSLNGLVNETDVQFSAERKKVADSLMDTISSLDKFEQGIKDCLE 235

BLAST of CmoCh05G002500 vs. NCBI nr
Match: gi|823133299|ref|XP_012466446.1| (PREDICTED: uncharacterized protein LOC105785058 [Gossypium raimondii])

HSP 1 Score: 254.2 bits (648), Expect = 2.2e-64
Identity = 138/230 (60.00%), Postives = 175/230 (76.09%), Query Frame = 1

Query: 2   TTIGFRLISVPSAVSPLSLLSHEPRDDQSQALRHNLPVTTSRRGLTMLSFLSAMPSLFLP 61
           T  G   I     +S  SL  +   +++ + LR       SRR    LS +S  PSL   
Sbjct: 16  TVAGLPPILTKPPISNQSLSINPSEENRQKVLR-----LISRRDAAFLSLISLFPSLLHT 75

Query: 62  APATAFDIGISGPKDWLREQKKKASRFLLAPIEASRDSLHAVYLMLSNG-SDYSNKDMED 121
             A+AF IGISGPKDWL+EQK+K+S+FLLAPI+ASR SLH+VYL+L +  S  SN D+E+
Sbjct: 76  PHASAFSIGISGPKDWLKEQKRKSSKFLLAPIDASRQSLHSVYLLLMDKESTISNNDLEE 135

Query: 122 VQRMLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNAASLLGNEDPIKLEAESRLK 181
           VQ++LKSAARDCV+++RNSFV FQA+TGVEVCTF+LIVKNA+SLL N++P+KLEAE+ L 
Sbjct: 136 VQKLLKSAARDCVVQERNSFVAFQANTGVEVCTFRLIVKNASSLLENKNPVKLEAEAMLD 195

Query: 182 DLVSSFTSLNSLAYETDIQVNSNRQKVLDAVNDTIDSLDKFEKGIKDCLE 231
           DL+SSFTSLN+LA E+DIQV S+RQ+V DA+ DTI SLDKFE+GIKDCLE
Sbjct: 196 DLISSFTSLNTLANESDIQVASSRQRVADALKDTITSLDKFEQGIKDCLE 240

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LPA8_CUCSA1.8e-10285.65Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361670 PE=4 SV=1[more]
W9RSU4_9ROSA8.5e-6861.97Uncharacterized protein OS=Morus notabilis GN=L484_001599 PE=4 SV=1[more]
A0A0D2NMF0_GOSRA1.5e-6460.00Uncharacterized protein OS=Gossypium raimondii GN=B456_002G127900 PE=4 SV=1[more]
A0A061FDJ4_THECC3.7e-6362.68Chloroplast thylakoid membrane OS=Theobroma cacao GN=TCM_034041 PE=4 SV=1[more]
E0CQC9_VITVI3.7e-6356.67Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g12500 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT5G42765.11.3e-5657.79 INVOLVED IN: biological_process unknown[more]
Match NameE-valueIdentityDescription
gi|659087941|ref|XP_008444717.1|2.4e-10385.65PREDICTED: uncharacterized protein LOC103487971 [Cucumis melo][more]
gi|449469979|ref|XP_004152696.1|2.6e-10285.65PREDICTED: uncharacterized protein LOC101216764 [Cucumis sativus][more]
gi|703102090|ref|XP_010097367.1|1.2e-6761.97hypothetical protein L484_001599 [Morus notabilis][more]
gi|694378681|ref|XP_009365567.1|1.7e-6457.87PREDICTED: uncharacterized protein LOC103955406 [Pyrus x bretschneideri][more]
gi|823133299|ref|XP_012466446.1|2.2e-6460.00PREDICTED: uncharacterized protein LOC105785058 [Gossypium raimondii][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G002500.1CmoCh05G002500.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36398FAMILY NOT NAMEDcoord: 1..231
score: 4.4

The following gene(s) are paralogous to this gene:

None