CmoCh05G001270 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAAGAGTCCATAAAATACATAGAAAGGCTCGGTCAATTTTTGTGATCTTTTGGATAATAGAAGTCACAAGAGTACTGGCGACGGTGAAGGCGAGGCAGAGGGAAAATGTTGCCACTGAGCCAAGCTCCGGCCGGCGTTTTACCGGCCAGAAAGTTCTCCTTAACCACGCTTCCCTCTCTCAAATTCTCTAACCCTAATCCTTTTCGGCGCTCTAAGTTTATTCCTAGAAGAAATCCTGCGAAACCTCTTAATATCACTCTTTCCAAAGCGGAAGGAACCGTCGATTCGACGAAACAGGCTGTTTCCAACTCTCCAAGTCCGCCTCCTTTTCCTACTGACCAAACGGTTTTCGTCGGCGATGAGAGTGTTCCGTTGGAAGGAGTTATTCAGTTCGATAAGCCCAATACGTCGTCTCGTTTGAGCAAATGGGGGTAATTTTGACGATTCCTTAGATTGATAAAATTTATTGTGAATTTTGCTTATTGTTCTGTGGTTCTTCAGCCGCGTGGCTCTGCTGGCTGGTGGAGATGTATTGGCCTTGCTTTTGTTCTCCTCAATTGGAAGATTCACCCATGGTTTCCCTGTTTTTGATTTCGAGACAGTACGCACGGCTGACCCTTTTATTGCTGGTATGATTGTTCCTATGCCAAAATTTGATGTTCAATCTTCATTGGTTTTTTTCTTCCCTTGATGAATGGATTATTATAGGTTGGTTTCTGAGTGCTTACTTTCTCGGTGGTTATGGAGAGGATGGTCGTGGGATGAATGGTTATTCCAAGGCTGTTATTGCCGCTTCCAAATCATGGGCTTTGGGAATTCCAGTAAGTTTATCAGCCTTAATTGTGTTTGTTCAGTGCATCTTAGTTCTGAGTTCCAAAGTTGAACTGGTTTTAGTTTGGTTACTCCTGAATTAGAATTCTTGTTGGAAAGGCCAGCTTCAGTTCTTATCTGAATAACACTACAACTTTTGGGTTTCCCAAGTGATGGATTGTAAACACTGAAAAAGCCACCTTTAAAAATATAGAACCAAGCATCAATATAATTTATCATTATACACTTTTTACATAAATATTTTTGATTAAAGAACTTTTGTCTAAAGTAGCACTCCCAAATCCTTGAACTAAATCTTTGTTTGCTGAAAAATAATGGTTTCCTTCATTTTTACCACTAAAGGCTAGAGTTGAGTTGTTCACATGAAAATACCATTGAACTAAGGCCGCCATCACAAGCAAATTTGTGTTTTCTTATTTATGATGTTCATGTGATCTTGGGTTGCCTTTCGCGTTCTTAACTCATTATAGATAACGATATCGTGACTCATTGTTCCCCGTTTGTCCTATGAATTCTGAAGTGTGGGCATTATAGATAGAGCTTGGTTCTTACCATCAGCACAAAAGATCACTTTGCTCTGTATGCCTACTGCAGCTAGGTCTACTAGTTCGGGTAGCAACATCCGGCCATCTTCCGCCATATAATTTCATAGGAGTGACGATGGGAAGCACGGCTGTTTTGCTCATTGGATGGAGAGCAATACTGTATAAAGTTTTTCCAGTCAACAACAGCAAGAAGAGTGATGTCTATCGGCGTGGCAACCCATTTGAACTATTTGAGGTGCCTATTTATGCCATTCCTTGTCATGAATGCTTCTTTGCAAACTGCTTATTTCTATCTTTAACTAGATACTTAACTGGTATCACGTGATGGGTTGGATAATCACACCTGAACGACATCTCGGTAAAATCTTCATCGTTTCTGAATACAATTGATATGACAATCTTCAAAAATGATTCATTTTCATTTTCATTTTCATTTTCATTTTCTTCCACGACTTGCATTCTCATGTCAATTGCTTTTGGTTACATAATCCTAACAGAAGTTATGTTGTGCAGTTGTTGACATCATTGGTGAGAAGGTGGTGATGAGGGAAAAACATCCCATTTGCTTGTATCATATTTTTTTTCTTTAAAGGGACCTTATAAACTAACTGGTAAGAGTCCCTCTACTTATGAACGAAATGTGTAATTCTCTAATCCAAGTTTTGTTGATTTATGTATCCTCTGACTTACTTTGTTCATACAAGGAAAGTTCGATAATCAATAGTGAGCTCTCTTTGTTGTCTAACAACCTTTAGATTACTCAATTCTCTTGAGAATGAA TAAAGAGTCCATAAAATACATAGAAAGGCTCGGTCAATTTTTGTGATCTTTTGGATAATAGAAGTCACAAGAGTACTGGCGACGGTGAAGGCGAGGCAGAGGGAAAATGTTGCCACTGAGCCAAGCTCCGGCCGGCGTTTTACCGGCCAGAAAGTTCTCCTTAACCACGCTTCCCTCTCTCAAATTCTCTAACCCTAATCCTTTTCGGCGCTCTAAGTTTATTCCTAGAAGAAATCCTGCGAAACCTCTTAATATCACTCTTTCCAAAGCGGAAGGAACCGTCGATTCGACGAAACAGGCTGTTTCCAACTCTCCAAGTCCGCCTCCTTTTCCTACTGACCAAACGGTTTTCGTCGGCGATGAGAGTGTTCCGTTGGAAGGAGTTATTCAGTTCGATAAGCCCAATACGTCGTCTCGTTTGAGCAAATGGGGCCGCGTGGCTCTGCTGGCTGGTGGAGATGTATTGGCCTTGCTTTTGTTCTCCTCAATTGGAAGATTCACCCATGGTTTCCCTGTTTTTGATTTCGAGACAGTACGCACGGCTGACCCTTTTATTGCTGGTTGGTTTCTGAGTGCTTACTTTCTCGGTGGTTATGGAGAGGATGGTCGTGGGATGAATGGTTATTCCAAGGCTGTTATTGCCGCTTCCAAATCATGGGCTTTGGGAATTCCACTAGGTCTACTAGTTCGGGTAGCAACATCCGGCCATCTTCCGCCATATAATTTCATAGGAGTGACGATGGGAAGCACGGCTGTTTTGCTCATTGGATGGAGAGCAATACTGTATAAAGTTTTTCCAGTCAACAACAGCAAGAAGAGTGATGTCTATCGGCGTGGCAACCCATTTGAACTATTTGAGTTGTTGACATCATTGGTGAGAAGGTGGTGATGAGGGAAAAACATCCCATTTGCTTGTATCATATTTTTTTTCTTTAAAGGGACCTTATAAACTAACTGGTAAGAGTCCCTCTACTTATGAACGAAATGTGTAATTCTCTAATCCAAGTTTTGTTGATTTATGTATCCTCTGACTTACTTTGTTCATACAAGGAAAGTTCGATAATCAATAGTGAGCTCTCTTTGTTGTCTAACAACCTTTAGATTACTCAATTCTCTTGAGAATGAA ATGTTGCCACTGAGCCAAGCTCCGGCCGGCGTTTTACCGGCCAGAAAGTTCTCCTTAACCACGCTTCCCTCTCTCAAATTCTCTAACCCTAATCCTTTTCGGCGCTCTAAGTTTATTCCTAGAAGAAATCCTGCGAAACCTCTTAATATCACTCTTTCCAAAGCGGAAGGAACCGTCGATTCGACGAAACAGGCTGTTTCCAACTCTCCAAGTCCGCCTCCTTTTCCTACTGACCAAACGGTTTTCGTCGGCGATGAGAGTGTTCCGTTGGAAGGAGTTATTCAGTTCGATAAGCCCAATACGTCGTCTCGTTTGAGCAAATGGGGCCGCGTGGCTCTGCTGGCTGGTGGAGATGTATTGGCCTTGCTTTTGTTCTCCTCAATTGGAAGATTCACCCATGGTTTCCCTGTTTTTGATTTCGAGACAGTACGCACGGCTGACCCTTTTATTGCTGGTTGGTTTCTGAGTGCTTACTTTCTCGGTGGTTATGGAGAGGATGGTCGTGGGATGAATGGTTATTCCAAGGCTGTTATTGCCGCTTCCAAATCATGGGCTTTGGGAATTCCACTAGGTCTACTAGTTCGGGTAGCAACATCCGGCCATCTTCCGCCATATAATTTCATAGGAGTGACGATGGGAAGCACGGCTGTTTTGCTCATTGGATGGAGAGCAATACTGTATAAAGTTTTTCCAGTCAACAACAGCAAGAAGAGTGATGTCTATCGGCGTGGCAACCCATTTGAACTATTTGAGTTGTTGACATCATTGGTGAGAAGGTGGTGA
BLAST of CmoCh05G001270 vs. TrEMBL
Match: A0A0A0LKI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G354020 PE=4 SV=1) HSP 1 Score: 490.3 bits (1261), Expect = 1.4e-135 Identity = 237/260 (91.15%), Postives = 252/260 (96.92%), Query Frame = 1
BLAST of CmoCh05G001270 vs. TrEMBL
Match: M5XDA7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009971mg PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 2.5e-100 Identity = 189/271 (69.74%), Postives = 227/271 (83.76%), Query Frame = 1
BLAST of CmoCh05G001270 vs. TrEMBL
Match: A0A0B0PPB7_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_06792 PE=4 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 1.9e-92 Identity = 174/261 (66.67%), Postives = 210/261 (80.46%), Query Frame = 1
BLAST of CmoCh05G001270 vs. TrEMBL
Match: A0A061FEE6_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_034653 PE=4 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 2.5e-92 Identity = 174/264 (65.91%), Postives = 208/264 (78.79%), Query Frame = 1
BLAST of CmoCh05G001270 vs. TrEMBL
Match: A0A0D2R0X1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G028000 PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 5.6e-92 Identity = 177/265 (66.79%), Postives = 211/265 (79.62%), Query Frame = 1
BLAST of CmoCh05G001270 vs. TAIR10
Match: AT1G44920.1 (AT1G44920.1 unknown protein) HSP 1 Score: 297.4 bits (760), Expect = 8.8e-81 Identity = 153/258 (59.30%), Postives = 197/258 (76.36%), Query Frame = 1
BLAST of CmoCh05G001270 vs. NCBI nr
Match: gi|659087566|ref|XP_008444522.1| (PREDICTED: uncharacterized protein LOC103487814 [Cucumis melo]) HSP 1 Score: 493.8 bits (1270), Expect = 1.8e-136 Identity = 241/260 (92.69%), Postives = 254/260 (97.69%), Query Frame = 1
BLAST of CmoCh05G001270 vs. NCBI nr
Match: gi|449450308|ref|XP_004142905.1| (PREDICTED: uncharacterized protein LOC101212562 [Cucumis sativus]) HSP 1 Score: 490.3 bits (1261), Expect = 2.0e-135 Identity = 237/260 (91.15%), Postives = 252/260 (96.92%), Query Frame = 1
BLAST of CmoCh05G001270 vs. NCBI nr
Match: gi|645227205|ref|XP_008220404.1| (PREDICTED: uncharacterized protein LOC103320498 [Prunus mume]) HSP 1 Score: 374.8 bits (961), Expect = 1.2e-100 Identity = 190/271 (70.11%), Postives = 227/271 (83.76%), Query Frame = 1
BLAST of CmoCh05G001270 vs. NCBI nr
Match: gi|596159324|ref|XP_007222898.1| (hypothetical protein PRUPE_ppa009971mg [Prunus persica]) HSP 1 Score: 373.2 bits (957), Expect = 3.6e-100 Identity = 189/271 (69.74%), Postives = 227/271 (83.76%), Query Frame = 1
BLAST of CmoCh05G001270 vs. NCBI nr
Match: gi|694312155|ref|XP_009361155.1| (PREDICTED: uncharacterized protein LOC103951492 [Pyrus x bretschneideri]) HSP 1 Score: 356.3 bits (913), Expect = 4.5e-95 Identity = 181/273 (66.30%), Postives = 217/273 (79.49%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |