CmoCh03G005850 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGCAGTGGCCTCAACCCAACGGCATCAGCAAGAACAGAGAGGCATCAGGGCTTTGTGCTGTGGATGCAGTTGTAATTGCAGGTTGAGTTTTTCATCTTCAGAAGAAGTAGAAAGCTTCAGGTCTGAGAGATTCCCGTCGGTCTCCAGCATAGCCCACGCCATGGTTCAGGAGAGACTCGACCAAATGATAAGGGAAAATCGAGAGATGAGGCAGAGTAAAGAACGAAGGAAACAGAGAAGTGAAGACACCAAATTTGTTGTAATGGTGGCGAGGGAGAAATGCTCTGACGACCCCAGAGAGGACTTTAGAGTTTCGATGATGGAAATGATTTTGGCTAACCGAATCGAGGAGCCAAAGGATCTACGTAGCCTGTTGAACTATTATATCTCCATGAACTCAGATGAGTGCCATGGGGTCATCTTAGAGGTGTTCCATGAGGTTTGTAGCCATTTGTTCTTGGCTTGTAAACGCCATTTGTAG ATGAAAGCAGTGGCCTCAACCCAACGGCATCAGCAAGAACAGAGAGGCATCAGGGCTTTGTGCTGTGGATGCAGTTGTAATTGCAGGTTGAGTTTTTCATCTTCAGAAGAAGTAGAAAGCTTCAGGTCTGAGAGATTCCCGTCGGTCTCCAGCATAGCCCACGCCATGGTTCAGGAGAGACTCGACCAAATGATAAGGGAAAATCGAGAGATGAGGCAGAGTAAAGAACGAAGGAAACAGAGAAGTGAAGACACCAAATTTGTTGTAATGGTGGCGAGGGAGAAATGCTCTGACGACCCCAGAGAGGACTTTAGAGTTTCGATGATGGAAATGATTTTGGCTAACCGAATCGAGGAGCCAAAGGATCTACGTAGCCTGTTGAACTATTATATCTCCATGAACTCAGATGAGTGCCATGGGGTCATCTTAGAGGTGTTCCATGAGGTTTGTAGCCATTTGTTCTTGGCTTGTAAACGCCATTTGTAG ATGAAAGCAGTGGCCTCAACCCAACGGCATCAGCAAGAACAGAGAGGCATCAGGGCTTTGTGCTGTGGATGCAGTTGTAATTGCAGGTTGAGTTTTTCATCTTCAGAAGAAGTAGAAAGCTTCAGGTCTGAGAGATTCCCGTCGGTCTCCAGCATAGCCCACGCCATGGTTCAGGAGAGACTCGACCAAATGATAAGGGAAAATCGAGAGATGAGGCAGAGTAAAGAACGAAGGAAACAGAGAAGTGAAGACACCAAATTTGTTGTAATGGTGGCGAGGGAGAAATGCTCTGACGACCCCAGAGAGGACTTTAGAGTTTCGATGATGGAAATGATTTTGGCTAACCGAATCGAGGAGCCAAAGGATCTACGTAGCCTGTTGAACTATTATATCTCCATGAACTCAGATGAGTGCCATGGGGTCATCTTAGAGGTGTTCCATGAGGTTTGTAGCCATTTGTTCTTGGCTTGTAAACGCCATTTGTAG
BLAST of CmoCh03G005850 vs. Swiss-Prot
Match: OFP9_ARATH (Probable transcription repressor OFP9 OS=Arabidopsis thaliana GN=OFP9 PE=3 SV=2) HSP 1 Score: 118.6 bits (296), Expect = 6.2e-26 Identity = 67/118 (56.78%), Postives = 88/118 (74.58%), Query Frame = 1
BLAST of CmoCh03G005850 vs. Swiss-Prot
Match: OFP3_ARATH (Transcription repressor OFP3 OS=Arabidopsis thaliana GN=OFP3 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 9.0e-09 Identity = 36/82 (43.90%), Postives = 48/82 (58.54%), Query Frame = 1
BLAST of CmoCh03G005850 vs. Swiss-Prot
Match: OFP5_ARATH (Transcription repressor OFP5 OS=Arabidopsis thaliana GN=OFP5 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 4.5e-08 Identity = 33/95 (34.74%), Postives = 58/95 (61.05%), Query Frame = 1
BLAST of CmoCh03G005850 vs. Swiss-Prot
Match: OFP6_ARATH (Transcription repressor OFP6 OS=Arabidopsis thaliana GN=OFP6 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 5.8e-08 Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 1
BLAST of CmoCh03G005850 vs. Swiss-Prot
Match: OFP1_ARATH (Transcription repressor OFP1 OS=Arabidopsis thaliana GN=OFP1 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07 Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 1
BLAST of CmoCh03G005850 vs. TrEMBL
Match: A0A0A0KHR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G512880 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 3.4e-63 Identity = 126/148 (85.14%), Postives = 133/148 (89.86%), Query Frame = 1
BLAST of CmoCh03G005850 vs. TrEMBL
Match: A0A0D2TLZ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G182600 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 3.9e-51 Identity = 109/160 (68.12%), Postives = 130/160 (81.25%), Query Frame = 1
BLAST of CmoCh03G005850 vs. TrEMBL
Match: B9N8G2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s00540g PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 1.4e-48 Identity = 105/160 (65.62%), Postives = 128/160 (80.00%), Query Frame = 1
BLAST of CmoCh03G005850 vs. TrEMBL
Match: A0A151STY5_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_004576 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 2.0e-47 Identity = 107/155 (69.03%), Postives = 126/155 (81.29%), Query Frame = 1
BLAST of CmoCh03G005850 vs. TrEMBL
Match: A0A061GGX8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_030311 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 1.7e-46 Identity = 105/148 (70.95%), Postives = 122/148 (82.43%), Query Frame = 1
BLAST of CmoCh03G005850 vs. TAIR10
Match: AT2G36026.1 (AT2G36026.1 Ovate family protein) HSP 1 Score: 66.2 bits (160), Expect = 2.1e-11 Identity = 36/78 (46.15%), Postives = 46/78 (58.97%), Query Frame = 1
BLAST of CmoCh03G005850 vs. TAIR10
Match: AT5G58360.1 (AT5G58360.1 ovate family protein 3) HSP 1 Score: 61.6 bits (148), Expect = 5.1e-10 Identity = 36/82 (43.90%), Postives = 48/82 (58.54%), Query Frame = 1
BLAST of CmoCh03G005850 vs. TAIR10
Match: AT4G18830.1 (AT4G18830.1 ovate family protein 5) HSP 1 Score: 59.3 bits (142), Expect = 2.5e-09 Identity = 33/95 (34.74%), Postives = 58/95 (61.05%), Query Frame = 1
BLAST of CmoCh03G005850 vs. TAIR10
Match: AT3G52525.1 (AT3G52525.1 ovate family protein 6) HSP 1 Score: 58.9 bits (141), Expect = 3.3e-09 Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 1
BLAST of CmoCh03G005850 vs. TAIR10
Match: AT5G01840.1 (AT5G01840.1 ovate family protein 1) HSP 1 Score: 57.8 bits (138), Expect = 7.3e-09 Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 1
BLAST of CmoCh03G005850 vs. NCBI nr
Match: gi|700193869|gb|KGN49073.1| (hypothetical protein Csa_6G512880 [Cucumis sativus]) HSP 1 Score: 249.2 bits (635), Expect = 4.8e-63 Identity = 126/148 (85.14%), Postives = 133/148 (89.86%), Query Frame = 1
BLAST of CmoCh03G005850 vs. NCBI nr
Match: gi|823218352|ref|XP_012441836.1| (PREDICTED: probable transcription repressor OFP9 [Gossypium raimondii]) HSP 1 Score: 209.1 bits (531), Expect = 5.6e-51 Identity = 109/160 (68.12%), Postives = 130/160 (81.25%), Query Frame = 1
BLAST of CmoCh03G005850 vs. NCBI nr
Match: gi|566164177|ref|XP_006383849.1| (hypothetical protein POPTR_0004s00540g [Populus trichocarpa]) HSP 1 Score: 200.7 bits (509), Expect = 2.0e-48 Identity = 105/160 (65.62%), Postives = 128/160 (80.00%), Query Frame = 1
BLAST of CmoCh03G005850 vs. NCBI nr
Match: gi|1009107367|ref|XP_015879375.1| (PREDICTED: probable transcription repressor OFP9 [Ziziphus jujuba]) HSP 1 Score: 197.2 bits (500), Expect = 2.2e-47 Identity = 112/164 (68.29%), Postives = 132/164 (80.49%), Query Frame = 1
BLAST of CmoCh03G005850 vs. NCBI nr
Match: gi|951000322|ref|XP_014506771.1| (PREDICTED: probable transcription repressor OFP9 [Vigna radiata var. radiata]) HSP 1 Score: 196.8 bits (499), Expect = 2.9e-47 Identity = 107/160 (66.88%), Postives = 126/160 (78.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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