CmoCh01G007620 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGATGGAGGAGGGTTCAGAAAGGCAAGAATGGAGCTTGAAGCACTCTACGAGGGAGTGCCAGACGAGTCAGTGAATCTCACCTTCCGACATCTCACAGACGTCAATGTTCAATCCAGAGCCAACCCATCAATCCAAATCCCAATCCCAAGAGATAATCAAAGCACCCCATTAACCAAACTCCCCAGCCTAGACTTCAACAGAGCCCTCCAAGCGGCCAACCAATACTCCCGCCCTGACGCCAAAATCAGCCTCCATCCGAGTGCGCAGGTCGGTGGGAGTAGTAGTGGGTCGCCGCTTGCCCCTGCCGGCCACATTCAAAGCCGTCCAACTTCGGAGCATGAGTACATGCATGCCCATGTTGGTGGGTTGAGGCCGGCTTTGGAGTACAGTGCAGCCTACGAGGAGGCAAGCCGCATCAGCGGCATGGGTTCCACGTATCTTCATCACAGAGCCACGCCGGGGAGACGCCGCCCGGGGATTCCTCACTCCAATATCTGCACCAACTGCACCACTTACATCTATGTCTTCCGCCATCGTTGCCTGGTATGCATCCATTTCATTTCTAACACACAAGAAAACACACTTACAGAAACAATCCACTGAAAACACATGCATATTGCTATGAATCTGGCAGGTCTGTGGAAGAGTTTACTGCCGGCAATGTGTGAGAATTGGGATGGGGGAGATGACGGAGGGAAGAAAGTGCATAGAATGTTTGGGAAGAAAATTCAGCCACAGGTTAATCATTGAACCCTCCAACTTTATAGGAATTGATTTAAAACTTCATTAAACATTAGAGACCAAAATTGAATGGGGTATCATCATTCATCAGGTACATAGGGGAGGCAGGAGATGTGGGGTGCTTCGGTTGGAGGTACTCAACTGCGGTGAAGCACGCAGAGCTTAAGTGGGCGGAGAAAGGGCCTCGCCGGAGAGGAGAGAGAGCCCCACTGAGAGGGTGCGGTGGCGGTGGCGGTGGCGGCGGGGTAACGAACTCCATGAGTATGATGTCGGCAAGTCAGAGCCCATGGGCACCGGCCACAACCAGTGTGGATATTTCCGCCGTTTACAGCTCTCGTTTCGCCGCCATGTCGTCCCCTCATTCTCCGGCTCACCGCCACCATTTACCGTTTTAGTTTCATGGTTTCGCCAATTCCTTATATTCATATTGTATTATTTTGACGTTTAAATCTATTTATCCG ATGGATGATGGAGGAGGGTTCAGAAAGGCAAGAATGGAGCTTGAAGCACTCTACGAGGGAGTGCCAGACGAGTCAGTGAATCTCACCTTCCGACATCTCACAGACGTCAATGTTCAATCCAGAGCCAACCCATCAATCCAAATCCCAATCCCAAGAGATAATCAAAGCACCCCATTAACCAAACTCCCCAGCCTAGACTTCAACAGAGCCCTCCAAGCGGCCAACCAATACTCCCGCCCTGACGCCAAAATCAGCCTCCATCCGAGTGCGCAGGTCGGTGGGAGTAGTAGTGGGTCGCCGCTTGCCCCTGCCGGCCACATTCAAAGCCGTCCAACTTCGGAGCATGAGTACATGCATGCCCATGTTGGTGGGTTGAGGCCGGCTTTGGAGTACAGTGCAGCCTACGAGGAGGCAAGCCGCATCAGCGGCATGGGTTCCACGTATCTTCATCACAGAGCCACGCCGGGGAGACGCCGCCCGGGGATTCCTCACTCCAATATCTGCACCAACTGCACCACTTACATCTATGTCTTCCGCCATCGTTGCCTGGTCTGTGGAAGAGTTTACTGCCGGCAATGTGTGAGAATTGGGATGGGGGAGATGACGGAGGGAAGAAAGTGCATAGAATGTTTGGGAAGAAAATTCAGCCACAGGTACATAGGGGAGGCAGGAGATGTGGGGTGCTTCGGTTGGAGGTACTCAACTGCGGTGAAGCACGCAGAGCTTAAGTGGGCGGAGAAAGGGCCTCGCCGGAGAGGAGAGAGAGCCCCACTGAGAGGGTGCGGTGGCGGTGGCGGTGGCGGCGGGGTAACGAACTCCATGAGTATGATGTCGGCAAGTCAGAGCCCATGGGCACCGGCCACAACCAGTGTGGATATTTCCGCCGTTTACAGCTCTCGTTTCGCCGCCATGTCGTCCCCTCATTCTCCGGCTCACCGCCACCATTTACCGTTTTAGTTTCATGGTTTCGCCAATTCCTTATATTCATATTGTATTATTTTGACGTTTAAATCTATTTATCCG ATGGATGATGGAGGAGGGTTCAGAAAGGCAAGAATGGAGCTTGAAGCACTCTACGAGGGAGTGCCAGACGAGTCAGTGAATCTCACCTTCCGACATCTCACAGACGTCAATGTTCAATCCAGAGCCAACCCATCAATCCAAATCCCAATCCCAAGAGATAATCAAAGCACCCCATTAACCAAACTCCCCAGCCTAGACTTCAACAGAGCCCTCCAAGCGGCCAACCAATACTCCCGCCCTGACGCCAAAATCAGCCTCCATCCGAGTGCGCAGGTCGGTGGGAGTAGTAGTGGGTCGCCGCTTGCCCCTGCCGGCCACATTCAAAGCCGTCCAACTTCGGAGCATGAGTACATGCATGCCCATGTTGGTGGGTTGAGGCCGGCTTTGGAGTACAGTGCAGCCTACGAGGAGGCAAGCCGCATCAGCGGCATGGGTTCCACGTATCTTCATCACAGAGCCACGCCGGGGAGACGCCGCCCGGGGATTCCTCACTCCAATATCTGCACCAACTGCACCACTTACATCTATGTCTTCCGCCATCGTTGCCTGGTCTGTGGAAGAGTTTACTGCCGGCAATGTGTGAGAATTGGGATGGGGGAGATGACGGAGGGAAGAAAGTGCATAGAATGTTTGGGAAGAAAATTCAGCCACAGGTACATAGGGGAGGCAGGAGATGTGGGGTGCTTCGGTTGGAGGTACTCAACTGCGGTGAAGCACGCAGAGCTTAAGTGGGCGGAGAAAGGGCCTCGCCGGAGAGGAGAGAGAGCCCCACTGAGAGGGTGCGGTGGCGGTGGCGGTGGCGGCGGGGTAACGAACTCCATGAGTATGATGTCGGCAAGTCAGAGCCCATGGGCACCGGCCACAACCAGTGTGGATATTTCCGCCGTTTACAGCTCTCGTTTCGCCGCCATGTCGTCCCCTCATTCTCCGGCTCACCGCCACCATTTACCGTTTTAG
BLAST of CmoCh01G007620 vs. TrEMBL
Match: A0A0A0LPU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G026000 PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 1.9e-118 Identity = 231/329 (70.21%), Postives = 246/329 (74.77%), Query Frame = 1
BLAST of CmoCh01G007620 vs. TrEMBL
Match: A0A0D2MPA6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G152600 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 8.2e-61 Identity = 157/327 (48.01%), Postives = 190/327 (58.10%), Query Frame = 1
BLAST of CmoCh01G007620 vs. TrEMBL
Match: B9INL9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s15060g PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.9e-57 Identity = 153/338 (45.27%), Postives = 189/338 (55.92%), Query Frame = 1
BLAST of CmoCh01G007620 vs. TrEMBL
Match: A0A061GZ03_THECC (Extra-large GTP-binding protein 3 OS=Theobroma cacao GN=TCM_042288 PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 2.5e-57 Identity = 160/350 (45.71%), Postives = 193/350 (55.14%), Query Frame = 1
BLAST of CmoCh01G007620 vs. TrEMBL
Match: B9I6Y1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s15300g PE=4 SV=2) HSP 1 Score: 230.7 bits (587), Expect = 2.5e-57 Identity = 153/348 (43.97%), Postives = 181/348 (52.01%), Query Frame = 1
BLAST of CmoCh01G007620 vs. NCBI nr
Match: gi|659114912|ref|XP_008457288.1| (PREDICTED: uncharacterized protein LOC103497015 [Cucumis melo]) HSP 1 Score: 504.6 bits (1298), Expect = 1.3e-139 Identity = 265/330 (80.30%), Postives = 280/330 (84.85%), Query Frame = 1
BLAST of CmoCh01G007620 vs. NCBI nr
Match: gi|700208824|gb|KGN63920.1| (hypothetical protein Csa_1G026000 [Cucumis sativus]) HSP 1 Score: 433.7 bits (1114), Expect = 2.7e-118 Identity = 231/329 (70.21%), Postives = 246/329 (74.77%), Query Frame = 1
BLAST of CmoCh01G007620 vs. NCBI nr
Match: gi|778656616|ref|XP_011649394.1| (PREDICTED: extra-large guanine nucleotide-binding protein 3-like [Cucumis sativus]) HSP 1 Score: 298.1 bits (762), Expect = 1.8e-77 Identity = 144/173 (83.24%), Postives = 152/173 (87.86%), Query Frame = 1
BLAST of CmoCh01G007620 vs. NCBI nr
Match: gi|645215717|ref|XP_008245353.1| (PREDICTED: uncharacterized protein LOC103343448 [Prunus mume]) HSP 1 Score: 246.5 bits (628), Expect = 6.2e-62 Identity = 163/373 (43.70%), Postives = 193/373 (51.74%), Query Frame = 1
BLAST of CmoCh01G007620 vs. NCBI nr
Match: gi|823143836|ref|XP_012471732.1| (PREDICTED: uncharacterized protein LOC105789064 [Gossypium raimondii]) HSP 1 Score: 242.3 bits (617), Expect = 1.2e-60 Identity = 157/327 (48.01%), Postives = 190/327 (58.10%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |