CmaCh16G009260.1 (mRNA) Cucurbita maxima (Rimu)

NameCmaCh16G009260.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr16 : 7045713 .. 7047023 (-)
Sequence length243
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGGTAATTATTATCGGCATATACTTAGTTTTAACCTGGCCTTTAATTTTTTTCTACCCTTATATCATCACTGTTTCAATTAAAAAGGCTGAAAAGGCAGAAATTACCATCGTAACAACACGGTGAAATCCACAAATACGAAAGTTTGGTAAAAAATATAACATCTTTGTTAATACGTACATTGAAACTTTATGATCAATAATTGAACCACTAAAATTTGATTTAAAATTTAACAAAAGCTTGTTGGAAGGATATGATATTAACGAAACATAAGATAAGATAAGATAAAAGATAAATAAATTATAAAGTTTAATGATATTTTTATATATATTGATAAAAAAAAAAATTATTTAATTAACAAAATTGAGTAATTACATTATTATTATTATTTATTTGAAATATAAAGGAAGGAGGTGAGGAGGATCACAAATCTGTTGGTGGAAGACCCTCTTCCGTTTCTTTTTTGGTTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTAAGGCTCACGAAGAGTTTGGGCGAAACTAAATAAACCATCTCCTTCTCTAATCTCTCTATTCCATTCACGACAAACACTTCTAGGTTTTCTTCCCCTCTCCCTCCCGTCTTCAATTTCTTCCCGACTGAGCTGCTCCCACCGTCACGCCGGCCATCCTCTCCACCTCAGGTACTCTCTCCTTCTCCAACTCTTGCTCTCCACTTTCAGATTTCCCCCAATCTCACTCTGCTTCAGCTCAATCAACGCTCTTGCTTCATTCCCCTTCCCCCTTTTCTGTTGCATTCCAAACCTACTCTTCTAATTTCGGGCCCTTCTGAAGTATTCTAGTTCGTTTTTTTGTATTCGATTTCTATACTCAATTCTCTGCTTGCTTGGATTAGCTTCTTTAATGTTCTAGGTCTAATTTTGCTGTTTTGGAGGTTCGTTTGAATGATTTAGTTTAAGCAATGAATATGCCTTTGGTTAGATTTCTGAGGCCCAAGTATTTATCCTTTTTCCCTGTACTTGTTTTTTTTGTTTTTTTGATTATCTGATGAATTGGCTATTTTACGAACGAACGAATGGCTTGAGTGAAATTGTTAGGTTAAGTGCTAATGAATTTGTGTGGAGGTGTTTACGGAGAGGTTGTTATTGGTGCAGAAACTGAAATCCCCTCTGTCTTCTTCATCTTCCAAGGCACTTACGTAA

mRNA sequence

ATGAACGGCTCACGAAGAGTTTGGGCGAAACTAAATAAACCATCTCCTTCTCTAATCTCTCTATTCCATTCACGACAAACACTTCTAGGTTTTCTTCCCCTCTCCCTCCCGTCTTCAATTTCTTCCCGACTGAGCTGCTCCCACCGTCACGCCGGCCATCCTCTCCACCTCAGGTCTAATTTTGCTGTTTTGGAGAAACTGAAATCCCCTCTGTCTTCTTCATCTTCCAAGGCACTTACGTAA

Coding sequence (CDS)

ATGAACGGCTCACGAAGAGTTTGGGCGAAACTAAATAAACCATCTCCTTCTCTAATCTCTCTATTCCATTCACGACAAACACTTCTAGGTTTTCTTCCCCTCTCCCTCCCGTCTTCAATTTCTTCCCGACTGAGCTGCTCCCACCGTCACGCCGGCCATCCTCTCCACCTCAGGTCTAATTTTGCTGTTTTGGAGAAACTGAAATCCCCTCTGTCTTCTTCATCTTCCAAGGCACTTACGTAA

Protein sequence

MNGSRRVWAKLNKPSPSLISLFHSRQTLLGFLPLSLPSSISSRLSCSHRHAGHPLHLRSNFAVLEKLKSPLSSSSSKALT
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh16G009260CmaCh16G009260gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh16G009260.1CmaCh16G009260.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh16G009260.1.CDS.4CmaCh16G009260.1.CDS.4CDS
CmaCh16G009260.1.CDS.3CmaCh16G009260.1.CDS.3CDS
CmaCh16G009260.1.CDS.2CmaCh16G009260.1.CDS.2CDS
CmaCh16G009260.1.CDS.1CmaCh16G009260.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh16G009260.1.exon.4CmaCh16G009260.1.exon.4exon
CmaCh16G009260.1.exon.3CmaCh16G009260.1.exon.3exon
CmaCh16G009260.1.exon.2CmaCh16G009260.1.exon.2exon
CmaCh16G009260.1.exon.1CmaCh16G009260.1.exon.1exon