CmaCh02G005110.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGCGAAGGAACGCCTCTTGCAAACCGCAAAACCCCAATTCGCAGCCACAAAAAATTAAGGAAAAACCAAAAGAAATTGGGATAATCCGACTCAGAATCCCACGAAAGGCTCACAACAATCCACGCACCCACAAATCTTTTTCCAAAACCCCAAATCTCCAATGGGTCGCACCTATTTCTCTTCTCCGAGAATCACTGCTTTCGGAGAAGACACAAGTAGATGCTTCGGCTGAATGTGTACTGCAGCAGTTGCTGCTCTCTGATTCCAGAAGGCAGAGATGTGAGGACTGGCTTTGGATTTGGGCCGTCTCTGGTGATCCGATTGAGGCGAAATCGGAGGCTGAATCGAAGGGTTTTAGCCAAAGCCTTGAAGGATGATCAGAAAGACGGCGCCGGCGGCAGATTTCCCGGCCAGAAATGGGACCCTGGTTTGGAAATTGAAGTCCCTTTTGAACAACGGCCGGTATGGATAGTTTTCTATAAAATATTCAGCGTTCATGCCGTTTCTCTGTTTCGAATTTCCATAAGCATATTCATAATTCTCTTCGAATTTCGGAGAGATGAAACATTCTTCTGCTTCATCTTGGGATAAACATTGTCAAAACTCATGAGCATTCTTATGGGTAAGAGTGAGAATCAAAAAGTAGAGTAGATGGGAATAACAACATTATTCCTACTTTTTCGAAGTGCTTAAAATCATTGGTTTAGAAACACACTGGATTAGTTCTTCGAATTAATAATATTTAAGGCTTAATAAACAGCTTTTCATTTTTTTAAACATTTTATATTGTGGGTAGTTGCTAATCTAGCCTAATTGGAATAGAATGCTGCAAAAATAATTGCTAGAACTTTTTTGTATTAAAAGTTTAACATCTGGCGTGGAGGAATCTCTACCAACCTCTTAGTTGAGCTTGCTTGTTTATGCTTTAATCTATTTAGTTGAGATAACATAACTATTAATTAATGATTAACATAGCTATCAACTAGTGATTAATATAACTGTAGTTCATTACCATCCACTGTGTTATTGATTAAACTAATGGACATCATTAAAGAAGTGATGAATAACTTTTTTAATAACAAACTCTATATATTCAAATATTTTAGCTACACCCATCCATTCTTTTTTATTCGTAAAACCAGGCTAAGATCTCGGAAATTGTTTGTTACAGTTGAAAACCTTAAATAAAATAAAAAAGAAAGGAAAGATAAAAGAGGAGGTGTCTCAACCATGTTACTGAAAAATGATTTAATGTAGTAATGACAAGGACAAGACTATTATTTGAGAAGTTTTATCATTCTATAGGGTTGAAATTGAAACTTTTGAATCATAGAGACCAATATAGAAGATGTAGCCAAATCACAGGAACCAAATTGAGCCTAAATCTTGAAACTTATAATATCAAACGGATGAAATTCAATTGAATCCCATTGAATAAGGTGGATGATTTAGAAGCATTATGTGTGGGAGTGCAGGTGAATGAATACTCATCTTTAAAAGACTCTGCATTGTATTCATGGGGGGAGCTGGGAGCTGGGCCATTCTTCCTTCGCCTTGGAGGGCTTTGGTTGGTAAGTTTCACGGTCTTAGGAGTTCCCGTTGCAGCCGCAAGCTTCAATCCATCAAGGGTACCTAACCAACTAATCATCCAATCTAATAATATTGAATTTGAAGAATGCTTTGAATCTTTCTGTGCTTACTTTTTTGTTTGTTTCAGGAACCTTTGCGATTTGTGCTTGCTGCTGGAATTGGAACCCTTCTCCTCGTCTCCTTGATTGTCCTGAGGATATATCTGGCAAGTTCTTCCATTATTGATTATTGGAGTTCTGGCTTGGGTGAAATAATCATTTCTTTGTCACTTCATTCAATAATTCACTTGCTGTGTTTATGTTAATTTTCAAGCCTACAAATAGAGGATAGAGTTCAAAAATATCCTTAAAAGAACAAACATTATCATAATTTATAGCCTAAACTTTTAGTCTATTGGTAGTTTAACCGTAGATGGGATTGTGGTTTCAGGGTTGGAGTTACGTGGGAGATAGGCTGTTATCGGCAGTCATACCTTACGAAGAGAGTGGATGGTATGACGGCCAAATGTGGGTTAAACCCCCTGAGGTAAGTTACTCTTAACTACAAACTCATTATTTCACTCTTCCTCTCACTTTAGCTACAAAATTTAAACGACATGCTTTGTTTTTGCCTTTGCTTTTAATAGTAGGCACTCAAACTTTGTTGTATTTCAATTGATGAATTCTTTTGTGAAAGAACCTGAAATGTATGATGATATGAGTATTGAAAAATGTGGATTGGTTATTCATTTACTAACGCACAAGAAATTTGGTTGAGTTATTTATTTATTATTCCATGTGGGGCAAGTTTTCATGTGTATCTTAAGCATTCTTTGTGAGTCCGATTGTTGGATCATTACATGCCTTTGTTCAATTTAAATGATAAACCTTAATTTTGATGACGAGTCATTCTTCGATTTTCTCTAACTTATCACGTTAAACTTTTGGGTTTCGCTCTAGAGTTGTCATCGCTGCAATGTTATTTCCTCTCCGTTTCAAATAGTAATTCACTTGCTCGGCCTTGTGTGCGTTGTGAGGGGACTGTTAAGAATATGCTAATTCTTTTTAATTTACCACCCTTTCTGTTGGCTTTAGTTTTGAGTGTGGAGTTCATTTAATCTTCTCTGGATTCTTTGGAAGGAAAGAAATCAAAGAATTGATAAGTTTTCGCCATTTGAGCCTTTCGGTTCGAGTGTGCGGTTTTTTGCTTCTTGGTGGTGTTCTACAACAAAATGTTCTTTTGTTTGTAATTATAGTCTTCTAATGGCTGTTCTAGATGTTCTTTTGTAGCTTGTTTGCATTGGGGATATTTTTTGTCCTCTTGAATATATTCTAATTTCTCATTTTCACTGTAGGTTCTGGCTCGTGATAGATTGTTAGGATCTTACAAGGTATTATCGAATACCGATATGATAAACTTCAGAAAAAATTTATTCTAATAGGAAATACTATCTAAATCTTCATTTAACTAAAGAAAAAAAAAATCAATATCTACAGGTTAAACCAGTGATCAACATGCTGAAACAAACTCTAGTTGGAACAGGGGTTGTTCTTGTCTCAGCTGTATTATTGTTCATATTTTCTACACCAGTGGAGGATTTTGTACAAACCACACTTTCCTCAAAACAAAGCACATCATCCAACGTTAATCCAGATTCAATCATCAACAAAAAATACAACTTAAGGTAATGAATTGAGTTGAAGCCTGTTGTTTCCCCTCTTCCTGTATTCTACTTCACAACTCAGCAATGAGTTTATATGTTTGTAGAAAGGACGAGTTGCTTCGGTTACCAGTTGAGGTCATGGCCGACGACGAGCTTGCAGCGGCAGCAGCGGAGGCAGCCGATGGAAGACCGGTTTACTGTAGAGATCGGTATTATCGAGCATTAGCAGGAGGACAATACTGCAAATGGGAGGACTTGGTTAAGTAAATACAAAGCTAGGTGAGAAATATTCAAAAGCAACTTGGTTTCTGTTTAAGCTGGGGAAGAAATGTTCAAATGATTGCATGATTCTATATAGTTTGGCAATTAATTGTAAGCCTTATTTTTTATATTTGTTACAATATTCCTAATAAGTTTTAGTTATGAAAGGTTATGGAAAGAGAATTACTATGGAAGAATACACGAAACTGCTAAACCTGTCAC GAGCGAAGGAACGCCTCTTGCAAACCGCAAAACCCCAATTCGCAGCCACAAAAAATTAAGGAAAAACCAAAAGAAATTGGGATAATCCGACTCAGAATCCCACGAAAGGCTCACAACAATCCACGCACCCACAAATCTTTTTCCAAAACCCCAAATCTCCAATGGGTCGCACCTATTTCTCTTCTCCGAGAATCACTGCTTTCGGAGAAGACACAAGTAGATGCTTCGGCTGAATGTGTACTGCAGCAGTTGCTGCTCTCTGATTCCAGAAGGCAGAGATGTGAGGACTGGCTTTGGATTTGGGCCGTCTCTGGTGATCCGATTGAGGCGAAATCGGAGGCTGAATCGAAGGGTTTTAGCCAAAGCCTTGAAGGATGATCAGAAAGACGGCGCCGGCGGCAGATTTCCCGGCCAGAAATGGGACCCTGGTTTGGAAATTGAAGTCCCTTTTGAACAACGGCCGGTGAATGAATACTCATCTTTAAAAGACTCTGCATTGTATTCATGGGGGGAGCTGGGAGCTGGGCCATTCTTCCTTCGCCTTGGAGGGCTTTGGTTGGTAAGTTTCACGGTCTTAGGAGTTCCCGTTGCAGCCGCAAGCTTCAATCCATCAAGGGAACCTTTGCGATTTGTGCTTGCTGCTGGAATTGGAACCCTTCTCCTCGTCTCCTTGATTGTCCTGAGGATATATCTGGGTTGGAGTTACGTGGGAGATAGGCTGTTATCGGCAGTCATACCTTACGAAGAGAGTGGATGGTATGACGGCCAAATGTGGGTTAAACCCCCTGAGGTTCTGGCTCGTGATAGATTGTTAGGATCTTACAAGGTTAAACCAGTGATCAACATGCTGAAACAAACTCTAGTTGGAACAGGGGTTGTTCTTGTCTCAGCTGTATTATTGTTCATATTTTCTACACCAGTGGAGGATTTTGTACAAACCACACTTTCCTCAAAACAAAGCACATCATCCAACGTTAATCCAGATTCAATCATCAACAAAAAATACAACTTAAGAAAGGACGAGTTGCTTCGGTTACCAGTTGAGGTCATGGCCGACGACGAGCTTGCAGCGGCAGCAGCGGAGGCAGCCGATGGAAGACCGGTTTACTGTAGAGATCGGTATTATCGAGCATTAGCAGGAGGACAATACTGCAAATGGGAGGACTTGGTTAAGTAAATACAAAGCTAGGTGAGAAATATTCAAAAGCAACTTGGTTTCTGTTTAAGCTGGGGAAGAAATGTTCAAATGATTGCATGATTCTATATAGTTTGGCAATTAATTGTAAGCCTTATTTTTTATATTTGTTACAATATTCCTAATAAGTTTTAGTTATGAAAGGTTATGGAAAGAGAATTACTATGGAAGAATACACGAAACTGCTAAACCTGTCAC ATGCTTCGGCTGAATGTGTACTGCAGCAGTTGCTGCTCTCTGATTCCAGAAGGCAGAGATGTGAGGACTGGCTTTGGATTTGGGCCGTCTCTGGTGATCCGATTGAGGCGAAATCGGAGGCTGAATCGAAGGGTTTTAGCCAAAGCCTTGAAGGATGATCAGAAAGACGGCGCCGGCGGCAGATTTCCCGGCCAGAAATGGGACCCTGGTTTGGAAATTGAAGTCCCTTTTGAACAACGGCCGGTGAATGAATACTCATCTTTAAAAGACTCTGCATTGTATTCATGGGGGGAGCTGGGAGCTGGGCCATTCTTCCTTCGCCTTGGAGGGCTTTGGTTGGTAAGTTTCACGGTCTTAGGAGTTCCCGTTGCAGCCGCAAGCTTCAATCCATCAAGGGAACCTTTGCGATTTGTGCTTGCTGCTGGAATTGGAACCCTTCTCCTCGTCTCCTTGATTGTCCTGAGGATATATCTGGGTTGGAGTTACGTGGGAGATAGGCTGTTATCGGCAGTCATACCTTACGAAGAGAGTGGATGGTATGACGGCCAAATGTGGGTTAAACCCCCTGAGGTTCTGGCTCGTGATAGATTGTTAGGATCTTACAAGGTTAAACCAGTGATCAACATGCTGAAACAAACTCTAGTTGGAACAGGGGTTGTTCTTGTCTCAGCTGTATTATTGTTCATATTTTCTACACCAGTGGAGGATTTTGTACAAACCACACTTTCCTCAAAACAAAGCACATCATCCAACGTTAATCCAGATTCAATCATCAACAAAAAATACAACTTAAGAAAGGACGAGTTGCTTCGGTTACCAGTTGAGGTCATGGCCGACGACGAGCTTGCAGCGGCAGCAGCGGAGGCAGCCGATGGAAGACCGGTTTACTGTAGAGATCGGTATTATCGAGCATTAGCAGGAGGACAATACTGCAAATGGGAGGACTTGGTTAAGTAA MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGGRFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLGVPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWYDGQMWVKPPEVLARDRLLGSYKVKPVINMLKQTLVGTGVVLVSAVLLFIFSTPVEDFVQTTLSSKQSTSSNVNPDSIINKKYNLRKDELLRLPVEVMADDELAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK
BLAST of CmaCh02G005110.1 vs. Swiss-Prot
Match: YCF36_PORPU (Uncharacterized protein ycf36 OS=Porphyra purpurea GN=ycf36 PE=3 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.4e-29 Identity = 66/156 (42.31%), Postives = 102/156 (65.38%), Query Frame = 1
BLAST of CmaCh02G005110.1 vs. Swiss-Prot
Match: YCF36_PYRYE (Uncharacterized protein ycf36 OS=Pyropia yezoensis GN=ycf36 PE=3 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.5e-28 Identity = 65/156 (41.67%), Postives = 102/156 (65.38%), Query Frame = 1
BLAST of CmaCh02G005110.1 vs. Swiss-Prot
Match: YCF36_CYAPA (Uncharacterized protein ycf36 OS=Cyanophora paradoxa GN=ycf36 PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.2e-25 Identity = 65/153 (42.48%), Postives = 96/153 (62.75%), Query Frame = 1
BLAST of CmaCh02G005110.1 vs. Swiss-Prot
Match: YCF36_GUITH (Uncharacterized protein ycf36 OS=Guillardia theta GN=ycf36 PE=3 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.5e-15 Identity = 57/158 (36.08%), Postives = 83/158 (52.53%), Query Frame = 1
BLAST of CmaCh02G005110.1 vs. TrEMBL
Match: A0A0A0LMH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G277630 PE=4 SV=1) HSP 1 Score: 548.1 bits (1411), Expect = 6.9e-153 Identity = 275/318 (86.48%), Postives = 291/318 (91.51%), Query Frame = 1
BLAST of CmaCh02G005110.1 vs. TrEMBL
Match: A0A061DGY1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_000751 PE=4 SV=1) HSP 1 Score: 463.4 bits (1191), Expect = 2.2e-127 Identity = 236/318 (74.21%), Postives = 266/318 (83.65%), Query Frame = 1
BLAST of CmaCh02G005110.1 vs. TrEMBL
Match: W9QJZ6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009428 PE=4 SV=1) HSP 1 Score: 461.8 bits (1187), Expect = 6.5e-127 Identity = 238/318 (74.84%), Postives = 272/318 (85.53%), Query Frame = 1
BLAST of CmaCh02G005110.1 vs. TrEMBL
Match: A5BUA8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g00470 PE=4 SV=1) HSP 1 Score: 461.8 bits (1187), Expect = 6.5e-127 Identity = 240/318 (75.47%), Postives = 268/318 (84.28%), Query Frame = 1
BLAST of CmaCh02G005110.1 vs. TrEMBL
Match: U5G4V2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s10140g PE=4 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 1.1e-126 Identity = 239/317 (75.39%), Postives = 266/317 (83.91%), Query Frame = 1
BLAST of CmaCh02G005110.1 vs. TAIR10
Match: AT5G67370.1 (AT5G67370.1 Protein of unknown function (DUF1230)) HSP 1 Score: 421.8 bits (1083), Expect = 3.8e-118 Identity = 214/286 (74.83%), Postives = 242/286 (84.62%), Query Frame = 1
BLAST of CmaCh02G005110.1 vs. TAIR10
Match: AT5G11840.1 (AT5G11840.1 Protein of unknown function (DUF1230)) HSP 1 Score: 146.0 bits (367), Expect = 4.0e-35 Identity = 82/162 (50.62%), Postives = 108/162 (66.67%), Query Frame = 1
BLAST of CmaCh02G005110.1 vs. NCBI nr
Match: gi|659115853|ref|XP_008457771.1| (PREDICTED: uncharacterized protein LOC103497381 [Cucumis melo]) HSP 1 Score: 552.4 bits (1422), Expect = 5.3e-154 Identity = 277/318 (87.11%), Postives = 292/318 (91.82%), Query Frame = 1
BLAST of CmaCh02G005110.1 vs. NCBI nr
Match: gi|449463963|ref|XP_004149699.1| (PREDICTED: uncharacterized protein LOC101211698 isoform X1 [Cucumis sativus]) HSP 1 Score: 548.1 bits (1411), Expect = 1.0e-152 Identity = 275/318 (86.48%), Postives = 291/318 (91.51%), Query Frame = 1
BLAST of CmaCh02G005110.1 vs. NCBI nr
Match: gi|590705526|ref|XP_007047463.1| (Uncharacterized protein TCM_000751 [Theobroma cacao]) HSP 1 Score: 463.4 bits (1191), Expect = 3.2e-127 Identity = 236/318 (74.21%), Postives = 266/318 (83.65%), Query Frame = 1
BLAST of CmaCh02G005110.1 vs. NCBI nr
Match: gi|225438936|ref|XP_002284127.1| (PREDICTED: uncharacterized protein ycf36 [Vitis vinifera]) HSP 1 Score: 461.8 bits (1187), Expect = 9.4e-127 Identity = 240/318 (75.47%), Postives = 268/318 (84.28%), Query Frame = 1
BLAST of CmaCh02G005110.1 vs. NCBI nr
Match: gi|703064805|ref|XP_010087295.1| (hypothetical protein L484_009428 [Morus notabilis]) HSP 1 Score: 461.8 bits (1187), Expect = 9.4e-127 Identity = 238/318 (74.84%), Postives = 272/318 (85.53%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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