CmaCh00G002830.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCCATTTCCCCCATCTCTTCAACTCTCTCAAAGTTTGGAGCTTTATTCAGTTTTGCTCATTTGGGTTCTTAGAAATTGGGATTTCGGAGTGACCCATTTAGCCAGACATCACCTTTTTGTTGTTCTTCTGTGGATTTTCCCCAATTTTAAACCCTTGAATGACCATATTCTTCTTACATTCTTCTTTCAAGCTTGCAATTTTCTGGGTTTTGACTCATCCCAACTACAGAGCCGCCGCCGCCATTCTTAATGGAACACAAGAGTTTGATCACCGAGTTGACTCAGGGGAAGGAGATGGCGATTCAACTCAAAACCCATCTTCCTTCTCCTCCTCCTCCTGGTTCTTCTCCACAAGCTCTCATTTTCTTGACGGAAATGATTCAGTCTTCTTTCGAGAATGCACTTTTGCTTCTGAATTGGAACCCTAAAGATCCATCCGAAGAAGAAGAAGAACCCACCAAGAACAAGAGGAAAAACAGCAGCAGAGATGTGCTGCTCAAGAGGAGGTAACTAATTTTGAGCTTCTTTTTCCAGTTCTTTTCCTCTGTTTTTCATTTGGATTTGGTTTTGCAGAAAGTTGCTGCCTAAATGGACTGAGGAAGTTAAGGTTGGCAGTGGCTCTGCCGCTGAAGGCCCACTCAATGATGGCCATAGTTGGAGAAAATATGGCCAAAAAGATATCCATGGCGCTAACTTTCCAAGGTGAATATCATAAGTTCATCGTTCTTCCACTAAAAAACAGGACAATTGTTTCTAATAATCAAATTTTTGCAGATGCTATTATAGATGCACTCATCGGAATGTACGAGGATGTTTGGCCACAAAACAAGTTCAGAAATCCGACAACGATCCCAACATTTTCGAGGTGACATACAGAGGACAGCACACATGCAACCAATCCGCAAATTTGGGATTGATTTCCGTTTCAAATCGGAACGAAATCCCAGAAGAAACCCATCAAAATCAACAAAACCCAAACTCTGAAATTCTCTTCAATTTCGGAGAACAACAGCATTTCGGTCTCAAAACAGAGGATTTTGACGATGTTTTTCCGCCGTTTTGCTTCGGATCGGAAACTGTCGATGAAGATGTGTTCTTAGAACAGATGATGGAGCCGGGTTTTGTTGCGGACGGCAACTGGTCTGCGGCGGCTGTGTCGTCGGCGACGTCGGAAACGGCCTGGGATTTAAGCGGTTACGGCGGAGAAATTCAGGGCGGCTGTGTCGTCGGCGACGTCGGAAACGGCCTGGGATTTAAGCGGTTACGGCGGAGAAATTCAGGGGGTTCAGTCGTCGGAGCAATCGAACATGACGGAGATGGTTTCGGCGACAACTTCAGTGACAAATTCGCCGATTGGTAA CCCATTTCCCCCATCTCTTCAACTCTCTCAAAGTTTGGAGCTTTATTCAGTTTTGCTCATTTGGGTTCTTAGAAATTGGGATTTCGGAGTGACCCATTTAGCCAGACATCACCTTTTTGTTGTTCTTCTGTGGATTTTCCCCAATTTTAAACCCTTGAATGACCATATTCTTCTTACATTCTTCTTTCAAGCTTGCAATTTTCTGGGTTTTGACTCATCCCAACTACAGAGCCGCCGCCGCCATTCTTAATGGAACACAAGAGTTTGATCACCGAGTTGACTCAGGGGAAGGAGATGGCGATTCAACTCAAAACCCATCTTCCTTCTCCTCCTCCTCCTGGTTCTTCTCCACAAGCTCTCATTTTCTTGACGGAAATGATTCAGTCTTCTTTCGAGAATGCACTTTTGCTTCTGAATTGGAACCCTAAAGATCCATCCGAAGAAGAAGAAGAACCCACCAAGAACAAGAGGAAAAACAGCAGCAGAGATGTGCTGCTCAAGAGGAGAAAGTTGCTGCCTAAATGGACTGAGGAAGTTAAGGTTGGCAGTGGCTCTGCCGCTGAAGGCCCACTCAATGATGGCCATAGTTGGAGAAAATATGGCCAAAAAGATATCCATGGCGCTAACTTTCCAAGATGCTATTATAGATGCACTCATCGGAATGTACGAGGATGTTTGGCCACAAAACAAGTTCAGAAATCCGACAACGATCCCAACATTTTCGAGGTGACATACAGAGGACAGCACACATGCAACCAATCCGCAAATTTGGGATTGATTTCCGTTTCAAATCGGAACGAAATCCCAGAAGAAACCCATCAAAATCAACAAAACCCAAACTCTGAAATTCTCTTCAATTTCGGAGAACAACAGCATTTCGGTCTCAAAACAGAGGATTTTGACGATGTTTTTCCGCCGTTTTGCTTCGGATCGGAAACTGTCGATGAAGATGTGTTCTTAGAACAGATGATGGAGCCGGGTTTTGTTGCGGACGGCAACTGGTCTGCGGCGGCTGTGTCGTCGGCGACGTCGGAAACGGCCTGGGATTTAAGCGGTTACGGCGGAGAAATTCAGGGCGGCTGTGTCGTCGGCGACGTCGGAAACGGCCTGGGATTTAAGCGGTTACGGCGGAGAAATTCAGGGGGTTCAGTCGTCGGAGCAATCGAACATGACGGAGATGGTTTCGGCGACAACTTCAGTGACAAATTCGCCGATTGGTAA ATGGAACACAAGAGTTTGATCACCGAGTTGACTCAGGGGAAGGAGATGGCGATTCAACTCAAAACCCATCTTCCTTCTCCTCCTCCTCCTGGTTCTTCTCCACAAGCTCTCATTTTCTTGACGGAAATGATTCAGTCTTCTTTCGAGAATGCACTTTTGCTTCTGAATTGGAACCCTAAAGATCCATCCGAAGAAGAAGAAGAACCCACCAAGAACAAGAGGAAAAACAGCAGCAGAGATGTGCTGCTCAAGAGGAGAAAGTTGCTGCCTAAATGGACTGAGGAAGTTAAGGTTGGCAGTGGCTCTGCCGCTGAAGGCCCACTCAATGATGGCCATAGTTGGAGAAAATATGGCCAAAAAGATATCCATGGCGCTAACTTTCCAAGATGCTATTATAGATGCACTCATCGGAATGTACGAGGATGTTTGGCCACAAAACAAGTTCAGAAATCCGACAACGATCCCAACATTTTCGAGGTGACATACAGAGGACAGCACACATGCAACCAATCCGCAAATTTGGGATTGATTTCCGTTTCAAATCGGAACGAAATCCCAGAAGAAACCCATCAAAATCAACAAAACCCAAACTCTGAAATTCTCTTCAATTTCGGAGAACAACAGCATTTCGGTCTCAAAACAGAGGATTTTGACGATGTTTTTCCGCCGTTTTGCTTCGGATCGGAAACTGTCGATGAAGATGTGTTCTTAGAACAGATGATGGAGCCGGGTTTTGTTGCGGACGGCAACTGGTCTGCGGCGGCTGTGTCGTCGGCGACGTCGGAAACGGCCTGGGATTTAAGCGGTTACGGCGGAGAAATTCAGGGCGGCTGTGTCGTCGGCGACGTCGGAAACGGCCTGGGATTTAAGCGGTTACGGCGGAGAAATTCAGGGGGTTCAGTCGTCGGAGCAATCGAACATGACGGAGATGGTTTCGGCGACAACTTCAGTGACAAATTCGCCGATTGGTAA MEHKSLITELTQGKEMAIQLKTHLPSPPPPGSSPQALIFLTEMIQSSFENALLLLNWNPKDPSEEEEEPTKNKRKNSSRDVLLKRRKLLPKWTEEVKVGSGSAAEGPLNDGHSWRKYGQKDIHGANFPRCYYRCTHRNVRGCLATKQVQKSDNDPNIFEVTYRGQHTCNQSANLGLISVSNRNEIPEETHQNQQNPNSEILFNFGEQQHFGLKTEDFDDVFPPFCFGSETVDEDVFLEQMMEPGFVADGNWSAAAVSSATSETAWDLSGYGGEIQGGCVVGDVGNGLGFKRLRRRNSGGSVVGAIEHDGDGFGDNFSDKFADW
BLAST of CmaCh00G002830.1 vs. Swiss-Prot
Match: WRK46_ARATH (Probable WRKY transcription factor 46 OS=Arabidopsis thaliana GN=WRKY46 PE=2 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.7e-30 Identity = 97/276 (35.14%), Postives = 144/276 (52.17%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. Swiss-Prot
Match: WRK41_ARATH (Probable WRKY transcription factor 41 OS=Arabidopsis thaliana GN=WRKY41 PE=2 SV=2) HSP 1 Score: 129.4 bits (324), Expect = 7.0e-29 Identity = 77/158 (48.73%), Postives = 94/158 (59.49%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. Swiss-Prot
Match: WRK53_ARATH (Probable WRKY transcription factor 53 OS=Arabidopsis thaliana GN=WRKY53 PE=1 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.0e-28 Identity = 62/119 (52.10%), Postives = 83/119 (69.75%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. Swiss-Prot
Match: WRK30_ARATH (Probable WRKY transcription factor 30 OS=Arabidopsis thaliana GN=WRKY30 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.5e-26 Identity = 66/180 (36.67%), Postives = 109/180 (60.56%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. Swiss-Prot
Match: WRK55_ARATH (WRKY transcription factor 55 OS=Arabidopsis thaliana GN=WRKY55 PE=2 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 7.3e-18 Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. TrEMBL
Match: A0A0A0L772_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119700 PE=4 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 4.5e-91 Identity = 190/296 (64.19%), Postives = 218/296 (73.65%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. TrEMBL
Match: B6DQ60_CUCSA (Putative WRKY transcription factor 30 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.3e-61 Identity = 129/189 (68.25%), Postives = 145/189 (76.72%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. TrEMBL
Match: C9DHZ5_9ROSI (WRKY transcription factor 6 OS=(Populus tomentosa x Populus bolleana) x Populus tomentosa PE=2 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 4.3e-57 Identity = 142/302 (47.02%), Postives = 188/302 (62.25%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. TrEMBL
Match: B9I8V9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s09190g PE=4 SV=2) HSP 1 Score: 223.8 bits (569), Expect = 3.0e-55 Identity = 138/298 (46.31%), Postives = 185/298 (62.08%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. TrEMBL
Match: V4U7F5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020744mg PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 4.6e-51 Identity = 129/294 (43.88%), Postives = 184/294 (62.59%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. TAIR10
Match: AT2G46400.1 (AT2G46400.1 WRKY DNA-binding protein 46) HSP 1 Score: 133.7 bits (335), Expect = 2.1e-31 Identity = 97/276 (35.14%), Postives = 144/276 (52.17%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. TAIR10
Match: AT4G11070.1 (AT4G11070.1 WRKY family transcription factor) HSP 1 Score: 129.4 bits (324), Expect = 4.0e-30 Identity = 77/158 (48.73%), Postives = 94/158 (59.49%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. TAIR10
Match: AT4G23810.1 (AT4G23810.1 WRKY family transcription factor) HSP 1 Score: 127.9 bits (320), Expect = 1.2e-29 Identity = 62/119 (52.10%), Postives = 83/119 (69.75%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. TAIR10
Match: AT5G24110.1 (AT5G24110.1 WRKY DNA-binding protein 30) HSP 1 Score: 120.9 bits (302), Expect = 1.4e-27 Identity = 66/180 (36.67%), Postives = 109/180 (60.56%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. TAIR10
Match: AT2G40740.1 (AT2G40740.1 WRKY DNA-binding protein 55) HSP 1 Score: 92.8 bits (229), Expect = 4.1e-19 Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. NCBI nr
Match: gi|778676947|ref|XP_011650695.1| (PREDICTED: probable WRKY transcription factor 46 [Cucumis sativus]) HSP 1 Score: 342.8 bits (878), Expect = 6.5e-91 Identity = 190/296 (64.19%), Postives = 218/296 (73.65%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. NCBI nr
Match: gi|659075009|ref|XP_008437915.1| (PREDICTED: probable WRKY transcription factor 46 [Cucumis melo]) HSP 1 Score: 331.3 bits (848), Expect = 1.9e-87 Identity = 184/299 (61.54%), Postives = 215/299 (71.91%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. NCBI nr
Match: gi|206604171|gb|ACI16506.1| (putative WRKY transcription factor 30 [Cucumis sativus]) HSP 1 Score: 245.0 bits (624), Expect = 1.8e-61 Identity = 129/189 (68.25%), Postives = 145/189 (76.72%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. NCBI nr
Match: gi|259121377|gb|ACV92008.1| (WRKY transcription factor 6 [(Populus tomentosa x Populus bolleana) x Populus tomentosa]) HSP 1 Score: 229.9 bits (585), Expect = 6.1e-57 Identity = 142/302 (47.02%), Postives = 188/302 (62.25%), Query Frame = 1
BLAST of CmaCh00G002830.1 vs. NCBI nr
Match: gi|566203346|ref|XP_002320852.2| (hypothetical protein POPTR_0014s09190g [Populus trichocarpa]) HSP 1 Score: 223.8 bits (569), Expect = 4.4e-55 Identity = 138/298 (46.31%), Postives = 185/298 (62.08%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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