CmaCh08G008850 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGGGAATTTCATTCTAACACTCTTATGAGTGAGAGGATGAGATTTTATTCAGTCTTGAAATCGGTCTTTACTTTTACTACATGGAATGAAGTAAATTATATCTCATAACATCCCGTTATCAACTCTATATTTAGTCGAGTCTTAGTCATTCCCGAAGATCCCAGGTATCAAGCATAATATAGCATTACCTACTTTTCTCGAGCCTGATACCCCCATTGAGTCAAGTATTGGGCCAAGCTGCCGTACTCCACTTCAAACCCGCCTAATACTCCAGTGGTGCTAGTCACAAAGCCTATCAAGATCAAGAGCATTCATCTCAGGACAAGATCATTATATATCACACTTCTTGACTCGTACACAAACCCAACGTATCGCACCCGCCGTACTACCCTTAACCTTTCCAGATTGCTTCCTACCCGTATTTGTCAAGAGCATTTCCAAGTCTTATTCTATCTCTCTATTGATTGGTTAAACCTCAGAATACCAGTCTATGTCTATGGGAGCATACTTGACAGGAGATAGACACAGGTGGTAGAGAGGTCCCCCACTTCGATTCCCGCCCCGTTAGCATCTCCGATCCGAGATAAGGGATGACTCCGTTAGGTCTTTTCGTTCTGGAGCCGGCCGGTAATGGACCTACTTACCTTGCTGGTAGACTTATTGAATTGACAACCGAACTATTCTCACCCAAACAAATCAAATCAAAGGACAAGCTGAGTTCATAACTTGATTAATATTGAATGGAATATCGAGTTGTGTAGTTTGAATTCAAGTAAATGGGAAAGTAAATTTTTGATTAAAAAGTAGGAAGTACTTTTTAACCTTAAGAATGCAAGCAATAGATGGGGTTGGATGTAACAAAATCGATCCAAAATCCTAGGTGTCCTCAGAAATGTGCCGCCACGTGCACGTCTCCGGCGAAAACAGCCGTCGTGATTTTACAGACTTCCGCAGCCACGTACCTGAACAATCCTTACCATCAAAACGCCACCTCTTTCACAAATCCCCCACCATTATCACCCTCTGTTTTCTTTTATCTTTCCATATTTTCCTTTCATTGTCTTCAAAATAGGTATGGCACACCACTTGGAAACCAAAGAATCAGAACCCATGGCGGTGGAAGTCGCCGACCAAACTGAACCCCTTTCTTCGCCGCCGTCTCACAATTCGGATGCCGGGAAAATTGCCGATTCTCCTCCCTCGCCGCCTGTGGAGGAGGCTCAGGGGTCTAAAATGGTCGACAGCGAGCAGCCTGTTCATCGTGTTCTCGGCGGCGGAAAGCGTACGCATCCTCTGTTTTTTCTTTTCCCATTAAAATGCCTTTTTTTTTTTTGTATAAATCTTAAAATTATTCTGTTTTATTTTAAATTTTTAAGAAAGAAAAAATCATGAATTTATTTGTGTAATATTGAACTCTCTTTTTCATAGGAGTTTATTTTAGTTAAGAGAGTTAATAGAAACTTAATCCTTAAGTAATTTAAGGAAGTGGAAATGAGTTCCTTGTCTTGTTTTTAAGATGGGTTAACCGTACCTACCTGAAGTTATCAATATATGAATTCTTAGCCATCGTGCAGTTTCTAAGATGGGTTTTTGGTAGCGTACTTGAAGTCATCAATATATAAATTTTTAGCGTAACTCCAAGATGGGTTATCGTAATTAAGTCGTCAATATATAAATTTTTAGCCATAACTTCAAGATGGGTCATTGGTAACGTACTTGAAGTCATCAATATATAAACTTTTTGCCGTAACTCCAAGATGGGTTATCAGTAACATACGTGTGGAGTCATCTAAACTCTTGGTCATTGTGGAGTTTTCAATGCTAACTCCAATTGTAAGCAGTTAAAAAAAAAAATTCAATCAAAGTTTCATTTTTAACTCCAATAGTTAATTGTTGAGGGGTATGAGAGAAATGAAGTTGTGCATATTGGCATAAACATTATTGATGAGTTGGTAATTTGTGTAGCTGCGGACGTGTTGTTATGGAAGAACAAGAAGATCTCTGCCGGGGTTCTCTGCGGAGCCACCGTGATTTGGGCGTTCTTTGAAGTCCTTGAATATCATCTTCTCCCATTGATATGTTACGCCTTGATCTTGGTTGTTGCTCTCTTATTCCTTTGGTCCAATGCTCACATTTTTATCTACAAGTAACCTTCATGCCCTCAAACTATGTGTTACATTCTTGAACTCTTACTTTTTAATGCAAAATTTCGACAAAAACTTCGACACATTGACAGGAGCCCGCCTCATCTTCCCGAAGCTCATATCAAGGACGAACCGTTCCTGCAGGTCGCCTCTGCAGCAAGAACTGTGATCAACCGGGCCATTGCAACGTTGGGTGATATAGCATCGGGGAGAGACGTGAAGAAGTTTCTAGCTGTAAGTACATTTATGAACTTGTGGTGTACTAATAATAGATACTTAACAATGTTTTTGGTTTCTCACAATGTTAGGTAGTTGCTGGCTTGTGGGTTCTATCAGTTATAGGAAGTTGGTGCAATTTTTTGACCTTGTTCTACATTGGTAATAATTTAACGATACTCCCCACGAAACTCGTGCCGTTTCGAACTTTTCTCACAATGTTGGTCTTTTTGAACAGCGGTCGTATTGCTGCACACGGTACCAGTCGTTTACGAGAAGTACAAGGGTAAGATCGATACGTCTGCACAAAGGATCATGGTCGAGAGTAAAAAGAGGTACGCGGTTTTTAACGAGAAAGTTGTGAGTAAACTTCCAAAAGGGGTATTTAGAGAGAAGAAGGAATGAAGGAGGAAATGATAGTGAAATTTGTAGGATGGTGGATGGTTTGAGTGGTTTGATTGTTGAGTAAGTTAAGTAAAACAAGGCCTCTTTGGTGGCTCATGTTGTGCAAATGTTTTGATTTGAAGTTCAAAGCAGCGGTTGTTTTTCTCTTGGTTTTTATGTGGGTGTACGTATTATATATGGTGAACAATGATGTACTTTTGTGTGTTGAAATTATGAATGATGGGTTCCGACTGTTGATGCTTGTTGATTCAGTGATATTTGATTTGTTAGGAT GTGGGAATTTCATTCTAACACTCTTATGAGTGAGAGGATGAGATTTTATTCAGTCTTGAAATCGGTCTTTACTTTTACTACATGGAATGAAGTAAATTATATCTCATAACATCCCGTTATCAACTCTATATTTAGTCGAGTCTTAGTCATTCCCGAAGATCCCAGGTATCAAGCATAATATAGCATTACCTACTTTTCTCGAGCCTGATACCCCCATTGAGTCAAGTATTGGGCCAAGCTGCCGTACTCCACTTCAAACCCGCCTAATACTCCAGTGGTGCTAGTCACAAAGCCTATCAAGATCAAGAGCATTCATCTCAGGACAAGATCATTATATATCACACTTCTTGACTCGTACACAAACCCAACGTATCGCACCCGCCGTACTACCCTTAACCTTTCCAGATTGCTTCCTACCCGTATTTGTCAAGAGCATTTCCAAGTCTTATTCTATCTCTCTATTGATTGGTTAAACCTCAGAATACCAGTCTATGTCTATGGGAGCATACTTGACAGGAGATAGACACAGGTGGTAGAGAGGTCCCCCACTTCGATTCCCGCCCCGTTAGCATCTCCGATCCGAGATAAGGGATGACTCCGTTAGGTCTTTTCGTTCTGGAGCCGGCCGGTAATGGACCTACTTACCTTGCTGGTAGACTTATTGAATTGACAACCGAACTATTCTCACCCAAACAAATCAAATCAAAGGACAAGCTGAGTTCATAACTTGATTAATATTGAATGGAATATCGAGTTGTGTAGTTTGAATTCAAGTAAATGGGAAAGTAAATTTTTGATTAAAAAGTAGGAAGTACTTTTTAACCTTAAGAATGCAAGCAATAGATGGGGTTGGATGTAACAAAATCGATCCAAAATCCTAGGTGTCCTCAGAAATGTGCCGCCACGTGCACGTCTCCGGCGAAAACAGCCGTCGTGATTTTACAGACTTCCGCAGCCACGTACCTGAACAATCCTTACCATCAAAACGCCACCTCTTTCACAAATCCCCCACCATTATCACCCTCTGTTTTCTTTTATCTTTCCATATTTTCCTTTCATTGTCTTCAAAATAGGTATGGCACACCACTTGGAAACCAAAGAATCAGAACCCATGGCGGTGGAAGTCGCCGACCAAACTGAACCCCTTTCTTCGCCGCCGTCTCACAATTCGGATGCCGGGAAAATTGCCGATTCTCCTCCCTCGCCGCCTGTGGAGGAGGCTCAGGGGTCTAAAATGGTCGACAGCGAGCAGCCTGTTCATCGTGTTCTCGGCGGCGGAAAGCCTGCGGACGTGTTGTTATGGAAGAACAAGAAGATCTCTGCCGGGGTTCTCTGCGGAGCCACCGTGATTTGGGCGTTCTTTGAAGTCCTTGAATATCATCTTCTCCCATTGATATGTTACGCCTTGATCTTGGTTGTTGCTCTCTTATTCCTTTGGTCCAATGCTCACATTTTTATCTACAAGAGCCCGCCTCATCTTCCCGAAGCTCATATCAAGGACGAACCGTTCCTGCAGGTCGCCTCTGCAGCAAGAACTGTGATCAACCGGGCCATTGCAACGTTGGGTGATATAGCATCGGGGAGAGACGTGAAGAAGTTTCTAGCTGTAGTTGCTGGCTTGTGGGTTCTATCAGTTATAGGAAGTTGGTGCAATTTTTTGACCTTGTTCTACATTGCGGTCGTATTGCTGCACACGGTACCAGTCGTTTACGAGAAGTACAAGGGTAAGATCGATACGTCTGCACAAAGGATCATGGTCGAGAGTAAAAAGAGGTACGCGGTTTTTAACGAGAAAGTTGTGAGTAAACTTCCAAAAGGGGTATTTAGAGAGAAGAAGGAATGAAGGAGGAAATGATAGTGAAATTTGTAGGATGGTGGATGGTTTGAGTGGTTTGATTGTTGAGTAAGTTAAGTAAAACAAGGCCTCTTTGGTGGCTCATGTTGTGCAAATGTTTTGATTTGAAGTTCAAAGCAGCGGTTGTTTTTCTCTTGGTTTTTATGTGGGTGTACGTATTATATATGGTGAACAATGATGTACTTTTGTGTGTTGAAATTATGAATGATGGGTTCCGACTGTTGATGCTTGTTGATTCAGTGATATTTGATTTGTTAGGAT ATGGCACACCACTTGGAAACCAAAGAATCAGAACCCATGGCGGTGGAAGTCGCCGACCAAACTGAACCCCTTTCTTCGCCGCCGTCTCACAATTCGGATGCCGGGAAAATTGCCGATTCTCCTCCCTCGCCGCCTGTGGAGGAGGCTCAGGGGTCTAAAATGGTCGACAGCGAGCAGCCTGTTCATCGTGTTCTCGGCGGCGGAAAGCCTGCGGACGTGTTGTTATGGAAGAACAAGAAGATCTCTGCCGGGGTTCTCTGCGGAGCCACCGTGATTTGGGCGTTCTTTGAAGTCCTTGAATATCATCTTCTCCCATTGATATGTTACGCCTTGATCTTGGTTGTTGCTCTCTTATTCCTTTGGTCCAATGCTCACATTTTTATCTACAAGAGCCCGCCTCATCTTCCCGAAGCTCATATCAAGGACGAACCGTTCCTGCAGGTCGCCTCTGCAGCAAGAACTGTGATCAACCGGGCCATTGCAACGTTGGGTGATATAGCATCGGGGAGAGACGTGAAGAAGTTTCTAGCTGTAGTTGCTGGCTTGTGGGTTCTATCAGTTATAGGAAGTTGGTGCAATTTTTTGACCTTGTTCTACATTGCGGTCGTATTGCTGCACACGGTACCAGTCGTTTACGAGAAGTACAAGGGTAAGATCGATACGTCTGCACAAAGGATCATGGTCGAGAGTAAAAAGAGGTACGCGGTTTTTAACGAGAAAGTTGTGAGTAAACTTCCAAAAGGGGTATTTAGAGAGAAGAAGGAATGA MAHHLETKESEPMAVEVADQTEPLSSPPSHNSDAGKIADSPPSPPVEEAQGSKMVDSEQPVHRVLGGGKPADVLLWKNKKISAGVLCGATVIWAFFEVLEYHLLPLICYALILVVALLFLWSNAHIFIYKSPPHLPEAHIKDEPFLQVASAARTVINRAIATLGDIASGRDVKKFLAVVAGLWVLSVIGSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSKLPKGVFREKKE
BLAST of CmaCh08G008850 vs. Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 4.8e-65 Identity = 128/232 (55.17%), Postives = 171/232 (73.71%), Query Frame = 1
BLAST of CmaCh08G008850 vs. Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 2.4e-64 Identity = 123/231 (53.25%), Postives = 173/231 (74.89%), Query Frame = 1
BLAST of CmaCh08G008850 vs. Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 4.7e-60 Identity = 120/236 (50.85%), Postives = 160/236 (67.80%), Query Frame = 1
BLAST of CmaCh08G008850 vs. Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 7.9e-60 Identity = 127/255 (49.80%), Postives = 172/255 (67.45%), Query Frame = 1
BLAST of CmaCh08G008850 vs. Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 1.8e-59 Identity = 118/228 (51.75%), Postives = 161/228 (70.61%), Query Frame = 1
BLAST of CmaCh08G008850 vs. TrEMBL
Match: A0A0A0KBC8_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_6G006830 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 2.0e-81 Identity = 162/251 (64.54%), Postives = 198/251 (78.88%), Query Frame = 1
BLAST of CmaCh08G008850 vs. TrEMBL
Match: B9RCJ7_RICCO (Reticulon-like protein OS=Ricinus communis GN=RCOM_1689400 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 4.8e-72 Identity = 144/255 (56.47%), Postives = 189/255 (74.12%), Query Frame = 1
BLAST of CmaCh08G008850 vs. TrEMBL
Match: W9REA6_9ROSA (Reticulon-like protein OS=Morus notabilis GN=L484_022471 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 1.1e-71 Identity = 142/230 (61.74%), Postives = 177/230 (76.96%), Query Frame = 1
BLAST of CmaCh08G008850 vs. TrEMBL
Match: A0A103XI82_CYNCS (Reticulon-like protein OS=Cynara cardunculus var. scolymus GN=Ccrd_006875 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 2.0e-70 Identity = 136/225 (60.44%), Postives = 175/225 (77.78%), Query Frame = 1
BLAST of CmaCh08G008850 vs. TrEMBL
Match: A0A0B0MVX0_GOSAR (Reticulon-like protein OS=Gossypium arboreum GN=F383_30268 PE=4 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 4.5e-70 Identity = 144/256 (56.25%), Postives = 188/256 (73.44%), Query Frame = 1
BLAST of CmaCh08G008850 vs. TAIR10
Match: AT4G23630.1 (AT4G23630.1 VIRB2-interacting protein 1) HSP 1 Score: 249.2 bits (635), Expect = 2.7e-66 Identity = 128/232 (55.17%), Postives = 171/232 (73.71%), Query Frame = 1
BLAST of CmaCh08G008850 vs. TAIR10
Match: AT4G11220.1 (AT4G11220.1 VIRB2-interacting protein 2) HSP 1 Score: 246.9 bits (629), Expect = 1.3e-65 Identity = 123/231 (53.25%), Postives = 173/231 (74.89%), Query Frame = 1
BLAST of CmaCh08G008850 vs. TAIR10
Match: AT5G41600.1 (AT5G41600.1 VIRB2-interacting protein 3) HSP 1 Score: 232.6 bits (592), Expect = 2.6e-61 Identity = 120/236 (50.85%), Postives = 160/236 (67.80%), Query Frame = 1
BLAST of CmaCh08G008850 vs. TAIR10
Match: AT2G46170.1 (AT2G46170.1 Reticulon family protein) HSP 1 Score: 230.7 bits (587), Expect = 1.0e-60 Identity = 118/228 (51.75%), Postives = 161/228 (70.61%), Query Frame = 1
BLAST of CmaCh08G008850 vs. TAIR10
Match: AT1G64090.2 (AT1G64090.2 Reticulan like protein B3) HSP 1 Score: 208.4 bits (529), Expect = 5.3e-54 Identity = 122/265 (46.04%), Postives = 165/265 (62.26%), Query Frame = 1
BLAST of CmaCh08G008850 vs. NCBI nr
Match: gi|700190493|gb|KGN45697.1| (hypothetical protein Csa_6G006830 [Cucumis sativus]) HSP 1 Score: 310.5 bits (794), Expect = 2.8e-81 Identity = 162/251 (64.54%), Postives = 198/251 (78.88%), Query Frame = 1
BLAST of CmaCh08G008850 vs. NCBI nr
Match: gi|659117573|ref|XP_008458672.1| (PREDICTED: reticulon-like protein B2 [Cucumis melo]) HSP 1 Score: 306.6 bits (784), Expect = 4.1e-80 Identity = 160/250 (64.00%), Postives = 196/250 (78.40%), Query Frame = 1
BLAST of CmaCh08G008850 vs. NCBI nr
Match: gi|778709207|ref|XP_011656361.1| (PREDICTED: reticulon-like protein B2 [Cucumis sativus]) HSP 1 Score: 303.5 bits (776), Expect = 3.4e-79 Identity = 151/215 (70.23%), Postives = 180/215 (83.72%), Query Frame = 1
BLAST of CmaCh08G008850 vs. NCBI nr
Match: gi|1009142606|ref|XP_015888813.1| (PREDICTED: reticulon-like protein B5 [Ziziphus jujuba]) HSP 1 Score: 279.6 bits (714), Expect = 5.3e-72 Identity = 142/256 (55.47%), Postives = 193/256 (75.39%), Query Frame = 1
BLAST of CmaCh08G008850 vs. NCBI nr
Match: gi|255537629|ref|XP_002509881.1| (PREDICTED: reticulon-like protein B1 [Ricinus communis]) HSP 1 Score: 279.3 bits (713), Expect = 6.9e-72 Identity = 144/255 (56.47%), Postives = 189/255 (74.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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