CmaCh01G012560 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCAGTTCCTCCTTCTTCAGATCTCTGTTTCTCTCGTAACCTCTCACCGGAACCCAAATGAGCAGCGGGCTCAACTTCGCGAGCTTCTACGCCACCTGGTTCGACCACCTCCACCACCTCATCCACCAGCTCTCCTCCACCCCCACCGACCACCACCACCACCACCTCGTCCACACCATCATCTCCCACTATTCCGAGTACTTCCGCGTCAAGTCCCTCGCCGCCGAGCGCGACCCTCTCTCCGTCTTCTCCGCCCCCTGGGCTACCTCCTTTGAACGCTCCCTTCATTGGGTAGCTGGTTGGCGTCCCACCACTACTTTTCATTTGATTTACTCCCAGTCAACTATTCTCTTTCAGTCCCAGATTGCTGATATTCTTCACGCTCCCCGCACCAGCGACCTTGGCGACCTCTCTCCCTTCCAGTTCCACCGTGTCAGCGAGATTCAGTGCCAAACGGTAAATACCCTCTTCATTTTTTTGTTTTTTTTTTTTGGAAGGTTTAAGGCCATAGCCCAAACGGTGTTAGATGAACACGACTCTCCACAATGGTATGATTTTGTCCACCGTGAGCAAAAGCTCTCATGGCTTTCCTTTTGGCTTCCCAAACTTTCATCGGTCAACACCTCCCCTTAATCGAGGCTCGACTCCAAAAGACTCCTTTGGAGTCTTAGTCATTTTTTAAGATTGACACGGCTAAGTTCAGCGAGATTCAGTGCCAAACGGTAAATACTTTTTGTTTTTTTTTGGAAGTTTTAAGGCCATAGCCCAGACGGTGTTAGATGAACACACATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCAAAAGGCCTCATACCAATGGAGTTAGTATTCCTCACTTATAAACCCATAATCATTCCCTAAATTAGCCGACGTGGGACTTTCATCATCCAACAGACGTAACATGTAACAGTTCCAGTCCACCGTTAACATATATTGTCATATTTGCGCTTTACTTTTCAGATTTCCCCTCAAGGCTTAAACACGTTCGGTAGAGAAAGATTTACCCACCTTTATAAAGGATGATTTGTTCTCCTCTTCAGATACCACAATCCACTCCTTCAGGGCCCAACATCCTCGACACTCGTTCCTTTCTTTAATCGATGTGGAACCGCCACTAAATCCACCCCTTCAAGGTCCAGCGTCTTTACTAGTATATTGGCTCGTGTCTACCGTTCAGACAACAACCTCCTTGCTGACACATAGTCTGGTGTCTGGCTTTAATACCATTTGTAATGGTCCAAATATTGTCCTTTTTGGGCTTTCAAGCTTTCTCTTTAGGTATTGAAATGCTTCTGCTAGGAAAAAAAAATTTCACACCGAGGTATTTCGTTCTCCTCCCTCAACCAATGTGGAATATCACATGACATAAAAGAAACTCGAGCTAGTAGAACCAATTAACTTAATAGAGCAAATGGCTTAATTAGGAGATTTAATAGAATAAGTTACCATAATATTGGTGGTAGCTACCAAGTCGTGGGACCAAGTCGTGGGGTTGAATTGAAAAGTTAGTTTATAATCTTCCTTTAAGAAAGATTTCTCTTCTCGAAATTTTTTATTTGTTTCAACATATTTGGATCTCGAAGGTCACCCATGGTTAAAAGTTTTGATGCAGGTGGAGGAGGAGAATGCAATAACGGATGAGCTATCGGAGTGGCAAGACGAGGAGAGCGAGCTGATGCAGAGGAGGGTGGAGGCGTCGGGGAAGGGTGAAGGTCTGGTTCGCATTATAAAGAAAGCGGACGATCTACGGCTGCGGACAGTGCAGAAGGTGGTGGAGCTTCTGACGCCGAAGCAAGCAGTGGAGTTCCTCATCGCCGCCGCCGAGCTCCAGTTTGGTGTTCGGGTGTGGGGGATAAATGAGGACCGTCAACGTGGCAATCATCCAGACACCTAAAACAATTTTAAATAAATTTGAGTTATAAAACCCCTCTATTTACTTATTATTACCGATCAAATTTTATGTCATTTTATAATTATATTACTTTATGAATATATCTTATGAACATCACACGCACAAAAAAGACAAAACTGAGGCCAATTTAGTAAATATGT TTCAGTTCCTCCTTCTTCAGATCTCTGTTTCTCTCGTAACCTCTCACCGGAACCCAAATGAGCAGCGGGCTCAACTTCGCGAGCTTCTACGCCACCTGGTTCGACCACCTCCACCACCTCATCCACCAGCTCTCCTCCACCCCCACCGACCACCACCACCACCACCTCGTCCACACCATCATCTCCCACTATTCCGAGTACTTCCGCGTCAAGTCCCTCGCCGCCGAGCGCGACCCTCTCTCCGTCTTCTCCGCCCCCTGGGCTACCTCCTTTGAACGCTCCCTTCATTGGGTAGCTGGTTGGCGTCCCACCACTACTTTTCATTTGATTTACTCCCAGTCAACTATTCTCTTTCAGTCCCAGATTGCTGATATTCTTCACGCTCCCCGCACCAGCGACCTTGGCGACCTCTCTCCCTTCCAGTTCCACCGTGTCAGCGAGATTCAGTGCCAAACGGTGGAGGAGGAGAATGCAATAACGGATGAGCTATCGGAGTGGCAAGACGAGGAGAGCGAGCTGATGCAGAGGAGGGTGGAGGCGTCGGGGAAGGGTGAAGGTCTGGTTCGCATTATAAAGAAAGCGGACGATCTACGGCTGCGGACAGTGCAGAAGGTGGTGGAGCTTCTGACGCCGAAGCAAGCAGTGGAGTTCCTCATCGCCGCCGCCGAGCTCCAGTTTGGTGTTCGGGTGTGGGGGATAAATGAGGACCGTCAACGTGGCAATCATCCAGACACCTAAAACAATTTTAAATAAATTTGAGTTATAAAACCCCTCTATTTACTTATTATTACCGATCAAATTTTATGTCATTTTATAATTATATTACTTTATGAATATATCTTATGAACATCACACGCACAAAAAAGACAAAACTGAGGCCAATTTAGTAAATATGT ATGAGCAGCGGGCTCAACTTCGCGAGCTTCTACGCCACCTGGTTCGACCACCTCCACCACCTCATCCACCAGCTCTCCTCCACCCCCACCGACCACCACCACCACCACCTCGTCCACACCATCATCTCCCACTATTCCGAGTACTTCCGCGTCAAGTCCCTCGCCGCCGAGCGCGACCCTCTCTCCGTCTTCTCCGCCCCCTGGGCTACCTCCTTTGAACGCTCCCTTCATTGGGTAGCTGGTTGGCGTCCCACCACTACTTTTCATTTGATTTACTCCCAGTCAACTATTCTCTTTCAGTCCCAGATTGCTGATATTCTTCACGCTCCCCGCACCAGCGACCTTGGCGACCTCTCTCCCTTCCAGTTCCACCGTGTCAGCGAGATTCAGTGCCAAACGGTGGAGGAGGAGAATGCAATAACGGATGAGCTATCGGAGTGGCAAGACGAGGAGAGCGAGCTGATGCAGAGGAGGGTGGAGGCGTCGGGGAAGGGTGAAGGTCTGGTTCGCATTATAAAGAAAGCGGACGATCTACGGCTGCGGACAGTGCAGAAGGTGGTGGAGCTTCTGACGCCGAAGCAAGCAGTGGAGTTCCTCATCGCCGCCGCCGAGCTCCAGTTTGGTGTTCGGGTGTGGGGGATAAATGAGGACCGTCAACGTGGCAATCATCCAGACACCTAA MSSGLNFASFYATWFDHLHHLIHQLSSTPTDHHHHHLVHTIISHYSEYFRVKSLAAERDPLSVFSAPWATSFERSLHWVAGWRPTTTFHLIYSQSTILFQSQIADILHAPRTSDLGDLSPFQFHRVSEIQCQTVEEENAITDELSEWQDEESELMQRRVEASGKGEGLVRIIKKADDLRLRTVQKVVELLTPKQAVEFLIAAAELQFGVRVWGINEDRQRGNHPDT
BLAST of CmaCh01G012560 vs. Swiss-Prot
Match: TGA21_TOBAC (TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Nicotiana tabacum GN=TGA21 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10 Identity = 54/205 (26.34%), Postives = 102/205 (49.76%), Query Frame = 1
BLAST of CmaCh01G012560 vs. Swiss-Prot
Match: TGA1_ARATH (Transcription factor TGA1 OS=Arabidopsis thaliana GN=TGA1 PE=1 SV=2) HSP 1 Score: 65.5 bits (158), Expect = 8.7e-10 Identity = 54/203 (26.60%), Postives = 93/203 (45.81%), Query Frame = 1
BLAST of CmaCh01G012560 vs. Swiss-Prot
Match: HBP1B_WHEAT (Transcription factor HBP-1b(c38) OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09 Identity = 54/214 (25.23%), Postives = 100/214 (46.73%), Query Frame = 1
BLAST of CmaCh01G012560 vs. Swiss-Prot
Match: TGA5_ARATH (Transcription factor TGA5 OS=Arabidopsis thaliana GN=TGA5 PE=1 SV=2) HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09 Identity = 58/195 (29.74%), Postives = 95/195 (48.72%), Query Frame = 1
BLAST of CmaCh01G012560 vs. Swiss-Prot
Match: TGA1A_TOBAC (TGACG-sequence-specific DNA-binding protein TGA-1A OS=Nicotiana tabacum GN=TGA1A PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.9e-09 Identity = 50/191 (26.18%), Postives = 85/191 (44.50%), Query Frame = 1
BLAST of CmaCh01G012560 vs. TrEMBL
Match: A0A0A0L389_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G625020 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 1.5e-88 Identity = 168/225 (74.67%), Postives = 192/225 (85.33%), Query Frame = 1
BLAST of CmaCh01G012560 vs. TrEMBL
Match: M5WXN5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022280mg PE=4 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 4.4e-77 Identity = 150/227 (66.08%), Postives = 181/227 (79.74%), Query Frame = 1
BLAST of CmaCh01G012560 vs. TrEMBL
Match: W9QBE8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004349 PE=4 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 4.1e-75 Identity = 146/227 (64.32%), Postives = 175/227 (77.09%), Query Frame = 1
BLAST of CmaCh01G012560 vs. TrEMBL
Match: A0A061FFR7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_031867 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 4.3e-72 Identity = 140/220 (63.64%), Postives = 173/220 (78.64%), Query Frame = 1
BLAST of CmaCh01G012560 vs. TrEMBL
Match: A0A0D2S6Y9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G271700 PE=4 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 3.1e-70 Identity = 135/220 (61.36%), Postives = 171/220 (77.73%), Query Frame = 1
BLAST of CmaCh01G012560 vs. TAIR10
Match: AT3G14880.1 (AT3G14880.1 BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1)) HSP 1 Score: 200.7 bits (509), Expect = 9.8e-52 Identity = 110/234 (47.01%), Postives = 152/234 (64.96%), Query Frame = 1
BLAST of CmaCh01G012560 vs. TAIR10
Match: AT4G18650.1 (AT4G18650.1 transcription factor-related) HSP 1 Score: 84.7 bits (208), Expect = 7.8e-17 Identity = 65/229 (28.38%), Postives = 108/229 (47.16%), Query Frame = 1
BLAST of CmaCh01G012560 vs. TAIR10
Match: AT4G18690.1 (AT4G18690.1 unknown protein) HSP 1 Score: 79.7 bits (195), Expect = 2.5e-15 Identity = 57/212 (26.89%), Postives = 103/212 (48.58%), Query Frame = 1
BLAST of CmaCh01G012560 vs. TAIR10
Match: AT4G18680.1 (AT4G18680.1 unknown protein) HSP 1 Score: 75.5 bits (184), Expect = 4.7e-14 Identity = 55/192 (28.65%), Postives = 99/192 (51.56%), Query Frame = 1
BLAST of CmaCh01G012560 vs. TAIR10
Match: AT1G58330.1 (AT1G58330.1 transcription factor-related) HSP 1 Score: 69.7 bits (169), Expect = 2.6e-12 Identity = 67/239 (28.03%), Postives = 102/239 (42.68%), Query Frame = 1
BLAST of CmaCh01G012560 vs. NCBI nr
Match: gi|449456699|ref|XP_004146086.1| (PREDICTED: transcription factor HBP-1b(c38) [Cucumis sativus]) HSP 1 Score: 334.0 bits (855), Expect = 2.1e-88 Identity = 168/225 (74.67%), Postives = 192/225 (85.33%), Query Frame = 1
BLAST of CmaCh01G012560 vs. NCBI nr
Match: gi|659127555|ref|XP_008463763.1| (PREDICTED: transcription factor TGA5 [Cucumis melo]) HSP 1 Score: 328.2 bits (840), Expect = 1.2e-86 Identity = 168/232 (72.41%), Postives = 190/232 (81.90%), Query Frame = 1
BLAST of CmaCh01G012560 vs. NCBI nr
Match: gi|1009161847|ref|XP_015899114.1| (PREDICTED: transcription factor TGA7, partial [Ziziphus jujuba]) HSP 1 Score: 298.1 bits (762), Expect = 1.3e-77 Identity = 150/224 (66.96%), Postives = 182/224 (81.25%), Query Frame = 1
BLAST of CmaCh01G012560 vs. NCBI nr
Match: gi|595884135|ref|XP_007212919.1| (hypothetical protein PRUPE_ppa022280mg [Prunus persica]) HSP 1 Score: 295.8 bits (756), Expect = 6.3e-77 Identity = 150/227 (66.08%), Postives = 181/227 (79.74%), Query Frame = 1
BLAST of CmaCh01G012560 vs. NCBI nr
Match: gi|703062054|ref|XP_010086637.1| (hypothetical protein L484_004349 [Morus notabilis]) HSP 1 Score: 289.3 bits (739), Expect = 5.9e-75 Identity = 146/227 (64.32%), Postives = 175/227 (77.09%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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