CmaCh01G003190 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATAAGCTAAAAGAAATTATAATTTAACCAAAAAAGGAATGTGCTACTGCCAACAGTAGACCCAAAGACGAGCAAGGTTGCGACGACCGGAGGGAAATGGGGGAAGAGCTGGATGATGAGCGGGAAATCCTGAAGCAAGTTTTTGGCGATTCTTCTGAAGATGAAGACTGTGAAGATCAAACTGTAATAGGAGATTCAGCATATGAAGGGGGCCACATTCGTAGATGGGAGCAAGCCAAGGAAATCAAAGGTTTATGGCTGTGCAGAAGCTTCCTCTCTCCCCAACAAGAATCATCGCTACTCTCTGCAATCCGAAACGGTTCGTCGTCTCAGAATCTATCTGTTACTTTCCTGCAATTTCTTATCTCAAGTTGCTTTGAAAGAGAATATCGAAGAAAATTGAATTTCTCTATGTTTTGATCATTCTTCTTCTTCGTATATTGTTTAAAGAGGTTCTGTTTTCGAATTTGATCCCTGAACTTAAGATTCAGCTGAAGGAACAATAGGATGGAGTTTTTTTTTTTTTTTTTTTTTTTTTTATAAATCAATTNACTTAAGATTCAGCTGAAGGAACAATAGGATGGAGTTTTTTTTTTTTTTTTTTGTTTAATTTATAAATCTTTGAGAAGAGTTTTTTTTTTACCCTTCTTTTTGAGATTGTAGATATTTGAGCAAGTTTGTGAATGTTTAAGAAACTATTTCTGTGGTAATCTCACATGATTAGAGACTATTTCTGTATTGTTGTTCTTTCAGAAGGGTGGTTCATGGAAGCCTCTCAAAATCAGGTAACTTCAGTTTTAATCTTGATAATTTTATTGGTGATCTATTATATTGATTTTATTTCTAGAAATGAACTCTTCTAGGAGAACTTCATAATTCTGCGCTGTTGCTGGATTTTGTTCTTGAAATGTAGACTTAATAATATCCTTATCTACTGTTACATTATCTGTTCAGGCCATGAGGTTTGGAAACCTTCCAACATGGGCTGCTGAACTTTCAGATTCCATTCATGAGGCAGTGCTTTCAAGTAACCACATGACAGATCCTTTGATTGTAGACCGCCATAATGGAGTTAAGATTGATTGTCCTCTTCCTTCAGATATTTTGTGGAGAGAACCACTCTTTGATCAAATGATAGCTAACATGTATCAACCAGGTGAGGTGCGAAGATGCCCATTTCCTTTCTATTGATTAGACATTTGTTAACCACGATTGGTTGGCTTAGCAGTTCATAAGAGCCATGTTATAAAGAGTTTAGAAGGAATGAGTTCAAGCCATAGTAATCGATTTAGGATTTAATATTTTCCTGACAACCAAATGTAGTCAGGTGGTTGTTTCATGAAAATAGTCGAGGTACGTGTAAGCTGACTCAAATATCATAAAAGGCGAGAGAAAAGAAGATTAGATATCTGTTTGAAGTGAACCTGTAGGACCATAGCTTCAAGGGCTTTAAGAGGCTGTTTGAATACCTTTTCTTTATGTAGAACCATATAACTTGTTTGGTAGGATAATTTTTAAAACACCCCTTGTTTTAGTAGAATGCAATTTTTAGAGTCAGTTTGCAAAACAGTTTCTGCAAACAGAATTTAGAGAATAACATTTTAGCCGCCTAGATTGTGATGCTCGGTCTGTCAAGATGATGGGTGTAGTTACTTGTAGTAGTAAGTAGCGAGAGGAGAAGAGGAGAGGGAGAGGACGCCTTATTTTATTTATTTATTATTATTTTTTTTATAGCGGTATTATGCCAAAAGTATAGTATCTTGATTAAGTCATTTCATATCTCTTTTATGAATTCTGTTTTTACTAGTTCACTTCTATGATTTGTCCAAATTCTGCACACTTCAATCTCTGTCATGATAGAGTAGATTTCCAGATGTTTTGTTAATCTGATGAAAATGGTTTTTGAATGGCATGGTTAAAACATATTAGGGTATGATATTCAAGAAAAGTTATATCTGACATTGCTATCTTCATTCACTGTATTTATTTCATTCACCTAGACATTGTTACAACTCCATTCTAATATTTTTCATAAAGGGGATCTGTGCACATGTTGACCTGATGCGCTTTGAAGATGGAATTGCCATTGTCTCACTCGAGTCACCGTGCGTGATGCATTTTACTCGAGTTGATGAAACTTCCTGTGATCCTACTAGCAAGGGAGAAGTCGATGTATCGATGTCAAAAGTGCCCATATACCTAAACCCAGGATCGGTTGTTTTATTGTGGGGTGAAGCTCGGTACCTCTGGAAGCATGAGATAAATCGTAAGCCGGGGTTTCAAATGTGGGAAGGCCAGGAACTCACTCAGGGGAGGCGAACTTCCATCACACTGAGAAAGCTCTGTCAAGTTGATTAA AATAAGCTAAAAGAAATTATAATTTAACCAAAAAAGGAATGTGCTACTGCCAACAGTAGACCCAAAGACGAGCAAGGTTGCGACGACCGGAGGGAAATGGGGGAAGAGCTGGATGATGAGCGGGAAATCCTGAAGCAAGTTTTTGGCGATTCTTCTGAAGATGAAGACTGTGAAGATCAAACTGTAATAGGAGATTCAGCATATGAAGGGGGCCACATTCGTAGATGGGAGCAAGCCAAGGAAATCAAAGGTTTATGGCTGTGCAGAAGCTTCCTCTCTCCCCAACAAGAATCATCGCTACTCTCTGCAATCCGAAACGAAGGGTGGTTCATGGAAGCCTCTCAAAATCAGGCCATGAGGTTTGGAAACCTTCCAACATGGGCTGCTGAACTTTCAGATTCCATTCATGAGGCAGTGCTTTCAAGTAACCACATGACAGATCCTTTGATTGTAGACCGCCATAATGGAGTTAAGATTGATTGTCCTCTTCCTTCAGATATTTTGTGGAGAGAACCACTCTTTGATCAAATGATAGCTAACATGTATCAACCAGGTGAGGGGATCTGTGCACATGTTGACCTGATGCGCTTTGAAGATGGAATTGCCATTGTCTCACTCGAGTCACCGTGCGTGATGCATTTTACTCGAGTTGATGAAACTTCCTGTGATCCTACTAGCAAGGGAGAAGTCGATGTATCGATGTCAAAAGTGCCCATATACCTAAACCCAGGATCGGTTGTTTTATTGTGGGGTGAAGCTCGGTACCTCTGGAAGCATGAGATAAATCGTAAGCCGGGGTTTCAAATGTGGGAAGGCCAGGAACTCACTCAGGGGAGGCGAACTTCCATCACACTGAGAAAGCTCTGTCAAGTTGATTAA ATGGGGGAAGAGCTGGATGATGAGCGGGAAATCCTGAAGCAAGTTTTTGGCGATTCTTCTGAAGATGAAGACTGTGAAGATCAAACTGTAATAGGAGATTCAGCATATGAAGGGGGCCACATTCGTAGATGGGAGCAAGCCAAGGAAATCAAAGGTTTATGGCTGTGCAGAAGCTTCCTCTCTCCCCAACAAGAATCATCGCTACTCTCTGCAATCCGAAACGAAGGGTGGTTCATGGAAGCCTCTCAAAATCAGGCCATGAGGTTTGGAAACCTTCCAACATGGGCTGCTGAACTTTCAGATTCCATTCATGAGGCAGTGCTTTCAAGTAACCACATGACAGATCCTTTGATTGTAGACCGCCATAATGGAGTTAAGATTGATTGTCCTCTTCCTTCAGATATTTTGTGGAGAGAACCACTCTTTGATCAAATGATAGCTAACATGTATCAACCAGGTGAGGGGATCTGTGCACATGTTGACCTGATGCGCTTTGAAGATGGAATTGCCATTGTCTCACTCGAGTCACCGTGCGTGATGCATTTTACTCGAGTTGATGAAACTTCCTGTGATCCTACTAGCAAGGGAGAAGTCGATGTATCGATGTCAAAAGTGCCCATATACCTAAACCCAGGATCGGTTGTTTTATTGTGGGGTGAAGCTCGGTACCTCTGGAAGCATGAGATAAATCGTAAGCCGGGGTTTCAAATGTGGGAAGGCCAGGAACTCACTCAGGGGAGGCGAACTTCCATCACACTGAGAAAGCTCTGTCAAGTTGATTAA MGEELDDEREILKQVFGDSSEDEDCEDQTVIGDSAYEGGHIRRWEQAKEIKGLWLCRSFLSPQQESSLLSAIRNEGWFMEASQNQAMRFGNLPTWAAELSDSIHEAVLSSNHMTDPLIVDRHNGVKIDCPLPSDILWREPLFDQMIANMYQPGEGICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSCDPTSKGEVDVSMSKVPIYLNPGSVVLLWGEARYLWKHEINRKPGFQMWEGQELTQGRRTSITLRKLCQVD
BLAST of CmaCh01G003190 vs. Swiss-Prot
Match: YLW2_SCHPO (Uncharacterized protein P8A3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAP8A3.02c PE=3 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.4e-11 Identity = 48/134 (35.82%), Postives = 71/134 (52.99%), Query Frame = 1
BLAST of CmaCh01G003190 vs. Swiss-Prot
Match: ALKB8_MACFA (Alkylated DNA repair protein alkB homolog 8 OS=Macaca fascicularis GN=ALKBH8 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.1e-11 Identity = 49/132 (37.12%), Postives = 64/132 (48.48%), Query Frame = 1
BLAST of CmaCh01G003190 vs. Swiss-Prot
Match: ALKB8_XENTR (Alkylated DNA repair protein alkB homolog 8 OS=Xenopus tropicalis GN=alkbh8 PE=2 SV=2) HSP 1 Score: 68.6 bits (166), Expect = 1.2e-10 Identity = 66/237 (27.85%), Postives = 98/237 (41.35%), Query Frame = 1
BLAST of CmaCh01G003190 vs. Swiss-Prot
Match: YL905_MIMIV (Uncharacterized protein L905 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L905 PE=3 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 4.5e-10 Identity = 52/216 (24.07%), Postives = 97/216 (44.91%), Query Frame = 1
BLAST of CmaCh01G003190 vs. Swiss-Prot
Match: ALKB8_BOVIN (Alkylated DNA repair protein alkB homolog 8 OS=Bos taurus GN=ALKBH8 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 7.7e-10 Identity = 54/167 (32.34%), Postives = 73/167 (43.71%), Query Frame = 1
BLAST of CmaCh01G003190 vs. TrEMBL
Match: A0A0A0KV56_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001660 PE=4 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 3.0e-130 Identity = 222/260 (85.38%), Postives = 243/260 (93.46%), Query Frame = 1
BLAST of CmaCh01G003190 vs. TrEMBL
Match: M5VJ71_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022838mg PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 6.0e-86 Identity = 161/252 (63.89%), Postives = 194/252 (76.98%), Query Frame = 1
BLAST of CmaCh01G003190 vs. TrEMBL
Match: D7U265_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g00160 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 1.3e-85 Identity = 157/258 (60.85%), Postives = 195/258 (75.58%), Query Frame = 1
BLAST of CmaCh01G003190 vs. TrEMBL
Match: A0A0D2PLX2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G011300 PE=4 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 2.3e-85 Identity = 158/255 (61.96%), Postives = 189/255 (74.12%), Query Frame = 1
BLAST of CmaCh01G003190 vs. TrEMBL
Match: A0A061DRI2_THECC (2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein OS=Theobroma cacao GN=TCM_004624 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 6.6e-85 Identity = 160/258 (62.02%), Postives = 195/258 (75.58%), Query Frame = 1
BLAST of CmaCh01G003190 vs. TAIR10
Match: AT4G02485.1 (AT4G02485.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 272.3 bits (695), Expect = 3.0e-73 Identity = 150/261 (57.47%), Postives = 179/261 (68.58%), Query Frame = 1
BLAST of CmaCh01G003190 vs. TAIR10
Match: AT1G31600.1 (AT1G31600.1 RNA-binding (RRM/RBD/RNP motifs) family protein) HSP 1 Score: 71.2 bits (173), Expect = 1.0e-12 Identity = 45/120 (37.50%), Postives = 59/120 (49.17%), Query Frame = 1
BLAST of CmaCh01G003190 vs. NCBI nr
Match: gi|449469096|ref|XP_004152257.1| (PREDICTED: uncharacterized protein LOC101207942 isoform X1 [Cucumis sativus]) HSP 1 Score: 472.6 bits (1215), Expect = 4.4e-130 Identity = 222/260 (85.38%), Postives = 243/260 (93.46%), Query Frame = 1
BLAST of CmaCh01G003190 vs. NCBI nr
Match: gi|659108733|ref|XP_008454361.1| (PREDICTED: alkylated DNA repair protein alkB homolog 8 isoform X1 [Cucumis melo]) HSP 1 Score: 456.1 bits (1172), Expect = 4.2e-125 Identity = 216/260 (83.08%), Postives = 237/260 (91.15%), Query Frame = 1
BLAST of CmaCh01G003190 vs. NCBI nr
Match: gi|595791787|ref|XP_007199642.1| (hypothetical protein PRUPE_ppa022838mg [Prunus persica]) HSP 1 Score: 325.5 bits (833), Expect = 8.6e-86 Identity = 161/252 (63.89%), Postives = 194/252 (76.98%), Query Frame = 1
BLAST of CmaCh01G003190 vs. NCBI nr
Match: gi|225437314|ref|XP_002263866.1| (PREDICTED: alkylated DNA repair protein alkB homolog 8 [Vitis vinifera]) HSP 1 Score: 324.3 bits (830), Expect = 1.9e-85 Identity = 157/258 (60.85%), Postives = 195/258 (75.58%), Query Frame = 1
BLAST of CmaCh01G003190 vs. NCBI nr
Match: gi|823202830|ref|XP_012435943.1| (PREDICTED: alkylated DNA repair protein alkB homolog 8 [Gossypium raimondii]) HSP 1 Score: 323.6 bits (828), Expect = 3.3e-85 Identity = 158/255 (61.96%), Postives = 189/255 (74.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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