Cucsa.100750.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTAGATTCAGAGCTGTTAGGAACCTTCCTGCTGAATTTCTTCATCAGTTGCCAATGAGCTACTTGAAGGTATATGGAGTTTTAAGAATATGCTACTTGAATGCACCCAATAGTTGTTATAGCTTATTAGTTGAGTTATATCTTATAAGTTGAGTATTGATATATGAGAAGAAAAGTTGGAAATGATTAAAGTTCTTCGGTTCCTATATATTTCAAGTTGCCTTTTGCAAAAGTTTTTCCTTGCAGAATACCATATTATTTGCCCCTAGCCAAGTATTGAGATAGTTATAAGGCAAAAACATTTTTTTTTCTCTGTTACAAGTAACCATTTGCACTAATGACTGGAAATGTGTATTGTTCATTGAATATTGCATCTTCATTTCCACATTTTCTTGTTTCTAATGGCCATTTGTTATGGTTATATCTTTGTATCATGTGGACGCTTGCTACTGAGTATGGTTTTCGAAACTTGTATTACTCTCAACTATTATTGTTGGTGCTCATACTTCAAGTGTGATCTCATTAGTCATCATTTAGATTGGTTAGTTATATAGGCATTTTTTCCCTTTTTTTGTTGTGCTAAAAAAATGTATACTCCACTATACTTAAATTCCCATTTGCCACCTACTTTGAGTTTTATACATTTTTTCCATGGACAAATCATAATGTTGTGCTAAAAGAACCATGAAAAAATGGTTTGTAAAATTTTGCTCACAGACCCACCTTTCAATCCTTCAAAGAACCGTGAAAAAATGGTTTGTGATATTTGATTTTCTTTCAATGTTATTTCAATTTCATTTGCTCAATTTAATGAGTTGGGTCAATTTAATCTTATAGGTAGAGACCATGTTTGAGAAGTACAACTTTTACTGGGGTCTTCATTCAAATCCAAGTAGTTTTAACTTTATATTGCTTAAGGTGCTTATAAAAATGAATTGAAAGTCAAAATTGTGCTTAGTTATTTTTCTGAACTTGTCATCTTTCTCAATTTTTTTCTTATAGTTTTCATCTAATTTTTTACTTAATTTTTCTTTTTGTGCTGGCAGGTTTACTGGCTGGATTAGTCATTGACTCTGGTGATGGTGTCACTCATGTGGTAAAAAATTTACATACTTGTCAAGAGGAGATTTAAAGGTATAGTTCTTAAGGGTTTTTTTTTTTTCTCTCTTTTTCATTTTATTTCTTTTTTAGCTTTCTAATCAATCAATGAGTTTTTGTTGATGGGGTTAATTCTCTCCAGCTTTCAGATTATGTCTAGATATTGTGTTTCTAAAAGGTGAGATTGTTGAGCTACTTTTACCCATTGTAGTTTCAATCTAGCTAGAATAAAGGATTTGGATATTGATCTTCAAAACTAATTTCACTTCAGGTTTTTTATTGTTTATTTGTCATTAGATTATGGTGTTCTATTCTTCAATGTTGCTCTGTTTTGTAGGTTTAATCATGCTCTAAGGTCAGTTGCAAATATTATACAAACTTCACATATATGGCTCTGTTTTGTTGTTTAATTTGCTCTTCTTTTATAGACAAGATATCTTCATTTTTTGAACTGGCCTGTCAAATGGGGGTGTCAGGATCTCCAGTCTTTTATATTTGTATTTGAGAGACATAAAAGGTGCATTGTTGGATCTCATCCCACCTCGTGGTTGA ATGTAGATTCAGAGCTGTTAGGAACCTTCCTGCTGAATTTCTTCATCAGTTGCCAATGAGCTACTTGAAGGTATATGgagttttaagaatatgctacttgaatgcacccaatagttttgccttttgcaaaagtttttccttgcagaataccatattatttgcccctagccaaaaccatgaaaaaatggtttgtaaaattttgctcacagacccacctttcaatccttcaaagaaccgtgaaaaaatgagaccatgtttgagaagtacaacttttactggggtcttcattcaaatccaagtagttttaactttatattgcttaagttttcatctaattttttacttaatttttctttttgtgctggcaggtttactggctggattagtcattgactctggtgatggtgtcactcatgtgatatcttcattttttgaactggcctgtcaaatgggggtagacataaaaggtgcattgttggatctcatcccacctcgtggttga ATGTAGATTCAGAGCTGTTAGGAACCTTCCTGCTGAATTTCTTCATCAGTTGCCAATGAGCTACTTGAAGGTATATGGAGTTTTAAGAATATGCTACTTGAATGCACCCAATAGTTTTGCCTTTTGCAAAAGTTTTTCCTTGCAGAATACCATATTATTTGCCCCTAGCCAAAACCATGAAAAAATGGTTTGTAAAATTTTGCTCACAGACCCACCTTTCAATCCTTCAAAGAACCGTGAAAAAATGAGACCATGTTTGAGAAGTACAACTTTTACTGGGGTCTTCATTCAAATCCAAGTAGTTTTAACTTTATATTGCTTAAGTTTTCATCTAATTTTTTACTTAATTTTTCTTTTTGTGCTGGCAGGTTTACTGGCTGGATTAGTCATTGACTCTGGTGATGGTGTCACTCATGTGATATCTTCATTTTTTGAACTGGCCTGTCAAATGGGGGTAGACATAAAAGGTGCATTGTTGGATCTCATCCCACCTCGTGGTTGA CRFRAVRNLPAEFLHQLPMSYLKVYGVLRICYLNAPNSFAFCKSFSLQNTILFAPSQNHEKMVCKILLTDPPFNPSKNREKMRPCLRSTTFTGVFIQIQVVLTLYCLSFHLIFYLIFLFVLAGLLAGLVIDSGDGVTHVISSFFELACQMGVDIKGALLDLIPPRG*
BLAST of Cucsa.100750.1 vs. Swiss-Prot
Match: ARP2_ARATH (Actin-related protein 2 OS=Arabidopsis thaliana GN=ARP2 PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.6e-16 Identity = 58/112 (51.79%), Postives = 62/112 (55.36%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. Swiss-Prot
Match: ARP2_ORYSI (Actin-related protein 2 OS=Oryza sativa subsp. indica GN=ARP2 PE=3 SV=2) HSP 1 Score: 83.2 bits (204), Expect = 3.0e-15 Identity = 62/165 (37.58%), Postives = 81/165 (49.09%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. Swiss-Prot
Match: ARP2_ORYSJ (Actin-related protein 2 OS=Oryza sativa subsp. japonica GN=ARP2 PE=3 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 3.0e-15 Identity = 62/165 (37.58%), Postives = 81/165 (49.09%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. Swiss-Prot
Match: ARP2B_DANRE (Actin-related protein 2-B OS=Danio rerio GN=actr2b PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 6.2e-13 Identity = 44/89 (49.44%), Postives = 53/89 (59.55%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. Swiss-Prot
Match: ARP2A_DANRE (Actin-related protein 2-A OS=Danio rerio GN=actr2a PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.1e-12 Identity = 43/89 (48.31%), Postives = 54/89 (60.67%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. TrEMBL
Match: M0U825_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 9.3e-16 Identity = 69/165 (41.82%), Postives = 83/165 (50.30%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. TrEMBL
Match: W9SL04_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010807 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.2e-15 Identity = 69/165 (41.82%), Postives = 82/165 (49.70%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. TrEMBL
Match: W1PF76_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00016p00217220 PE=3 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.6e-15 Identity = 68/165 (41.21%), Postives = 84/165 (50.91%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. TrEMBL
Match: A0A0D2PXM4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G275200 PE=3 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 4.6e-15 Identity = 69/165 (41.82%), Postives = 83/165 (50.30%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. TrEMBL
Match: A0A0D2QWS2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G275200 PE=3 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 4.6e-15 Identity = 69/165 (41.82%), Postives = 83/165 (50.30%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. TAIR10
Match: AT3G27000.1 (AT3G27000.1 actin related protein 2) HSP 1 Score: 87.4 bits (215), Expect = 8.9e-18 Identity = 58/112 (51.79%), Postives = 62/112 (55.36%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. TAIR10
Match: AT2G37620.1 (AT2G37620.1 actin 1) HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07 Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. TAIR10
Match: AT3G53750.1 (AT3G53750.1 actin 3) HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07 Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. TAIR10
Match: AT2G42100.1 (AT2G42100.1 Actin-like ATPase superfamily protein) HSP 1 Score: 53.1 bits (126), Expect = 1.9e-07 Identity = 31/76 (40.79%), Postives = 41/76 (53.95%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. TAIR10
Match: AT5G09810.1 (AT5G09810.1 actin 7) HSP 1 Score: 52.4 bits (124), Expect = 3.2e-07 Identity = 34/110 (30.91%), Postives = 52/110 (47.27%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. NCBI nr
Match: gi|729411138|ref|XP_010556296.1| (PREDICTED: LOW QUALITY PROTEIN: actin-related protein 2 [Tarenaya hassleriana]) HSP 1 Score: 92.4 bits (228), Expect = 7.9e-16 Identity = 70/165 (42.42%), Postives = 81/165 (49.09%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. NCBI nr
Match: gi|695078387|ref|XP_009386576.1| (PREDICTED: actin-related protein 2 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 91.7 bits (226), Expect = 1.3e-15 Identity = 69/165 (41.82%), Postives = 83/165 (50.30%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. NCBI nr
Match: gi|703160039|ref|XP_010112402.1| (hypothetical protein L484_010807 [Morus notabilis]) HSP 1 Score: 91.3 bits (225), Expect = 1.8e-15 Identity = 69/165 (41.82%), Postives = 82/165 (49.70%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. NCBI nr
Match: gi|548847077|gb|ERN06281.1| (hypothetical protein AMTR_s00016p00217220 [Amborella trichopoda]) HSP 1 Score: 90.9 bits (224), Expect = 2.3e-15 Identity = 68/165 (41.21%), Postives = 84/165 (50.91%), Query Frame = 1
BLAST of Cucsa.100750.1 vs. NCBI nr
Match: gi|769811666|ref|XP_011623448.1| (PREDICTED: actin-related protein 2 isoform X2 [Amborella trichopoda]) HSP 1 Score: 90.9 bits (224), Expect = 2.3e-15 Identity = 68/165 (41.21%), Postives = 84/165 (50.91%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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