Cucsa.321240 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGGCCACCCGAAACCCAAGCAGATGAAGAGATCATCCAGTGCCTCCATAGTCTCAGATAATAGATTCGTATGTTCCTCGTCGTCTTTGTCGCTATCCTCAATCTTCAGATCTTCCAGTGTCAGTTCCGGATTGGAATCAGAGCCTTACCTGCCAACGTTCAGTCCCTTCTCTCACGCTGCCGAGAAGAAACGTCGCCATCTTAAGCTCGCTAAGATTTTCATCCACTCCATCCCTTTCGTCATTCTCTTTTGCGCCATCGTTCTGTGGTTATTCTCCGATCCAGGTACTGAAATTACTCGAGTGAAAGATGCTCGTAGATCGAGATCGACTATTTGAATATTAAAGATGACAAATAGTTAATATATTTTAATTAGTAATTGCCGCCGGACTTGTAAATATCTTTGTGGATACCAATGGATTATCGATTACACGTACAAGCAGAGTGCTTAAAATCATTGGGAATCCAGTCTGTCGACCTTGTTGTCGTTATGTATGCGCTTCTTATTTT CCGGCCACCCGAAACCCAAGCAGATGAAGAGATCATCCAGTGCCTCCATAGTCTCAGATAATAGATTCGTATGTTCCTCGTCGTCTTTGTCGCTATCCTCAATCTTCAGATCTTCCAGTGTCAGTTCCGGATTGGAATCAGAGCCTTACCTGCCAACGTTCAGTCCCTTCTCTCACGCTGCCGAGAAGAAACGTCGCCATCTTAAGCTCGCTAAGATTTTCATCCACTCCATCCCTTTCGTCATTCTCTTTTGCGCCATCGTTCTGTGGTTATTCTCCGATCCAGGTACTGAAATTACTCGAGTGAAAGATGCTCGTAGATCGAGATCGACTATTTGAATATTAAAGATGACAAATAGTTAATATATTTTAATTAGTAATTGCCGCCGGACTTGTAAATATCTTTGTGGATACCAATGGATTATCGATTACACGTACAAGCAGAGTGCTTAAAATCATTGGGAATCCAGTCTGTCGACCTTGTTGTCGTTATGTATGCGCTTCTTATTTT ATGAAGAGATCATCCAGTGCCTCCATAGTCTCAGATAATAGATTCGTATGTTCCTCGTCGTCTTTGTCGCTATCCTCAATCTTCAGATCTTCCAGTGTCAGTTCCGGATTGGAATCAGAGCCTTACCTGCCAACGTTCAGTCCCTTCTCTCACGCTGCCGAGAAGAAACGTCGCCATCTTAAGCTCGCTAAGATTTTCATCCACTCCATCCCTTTCGTCATTCTCTTTTGCGCCATCGTTCTGTGGTTATTCTCCGATCCAGGTACTGAAATTACTCGAGTGAAAGATGCTCGTAGATCGAGATCGACTATTTGA MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHLKLAKIFIHSIPFVILFCAIVLWLFSDPGTEITRVKDARRSRSTI*
BLAST of Cucsa.321240 vs. TrEMBL
Match: A0A0A0L1G0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017240 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 1.8e-49 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1
BLAST of Cucsa.321240 vs. TrEMBL
Match: M5WB70_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013973mg PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 7.4e-11 Identity = 38/87 (43.68%), Postives = 59/87 (67.82%), Query Frame = 1
BLAST of Cucsa.321240 vs. TrEMBL
Match: A0A0B0PAT8_GOSAR (Gamma-glutamyl phosphate reductase OS=Gossypium arboreum GN=F383_24689 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.3e-10 Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 1
BLAST of Cucsa.321240 vs. TrEMBL
Match: G7I2Z4_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_1g090200 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.3e-09 Identity = 37/87 (42.53%), Postives = 55/87 (63.22%), Query Frame = 1
BLAST of Cucsa.321240 vs. TrEMBL
Match: B3H642_ARATH (Uncharacterized protein OS=Arabidopsis thaliana GN=At2g35658 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 7.0e-09 Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 1
BLAST of Cucsa.321240 vs. TAIR10
Match: AT2G35658.2 (AT2G35658.2 unknown protein) HSP 1 Score: 68.2 bits (165), Expect = 3.5e-12 Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 1
BLAST of Cucsa.321240 vs. TAIR10
Match: AT5G61630.1 (AT5G61630.1 unknown protein) HSP 1 Score: 49.3 bits (116), Expect = 1.7e-06 Identity = 31/92 (33.70%), Postives = 49/92 (53.26%), Query Frame = 1
BLAST of Cucsa.321240 vs. TAIR10
Match: AT5G07490.1 (AT5G07490.1 unknown protein) HSP 1 Score: 47.0 bits (110), Expect = 8.4e-06 Identity = 22/54 (40.74%), Postives = 33/54 (61.11%), Query Frame = 1
BLAST of Cucsa.321240 vs. NCBI nr
Match: gi|700200697|gb|KGN55830.1| (hypothetical protein Csa_3G017240 [Cucumis sativus]) HSP 1 Score: 203.0 bits (515), Expect = 2.6e-49 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1
BLAST of Cucsa.321240 vs. NCBI nr
Match: gi|778675256|ref|XP_011650378.1| (PREDICTED: uncharacterized protein LOC101212731 [Cucumis sativus]) HSP 1 Score: 174.1 bits (440), Expect = 1.3e-40 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1
BLAST of Cucsa.321240 vs. NCBI nr
Match: gi|659095829|ref|XP_008448788.1| (PREDICTED: uncharacterized protein LOC103490852 isoform X2 [Cucumis melo]) HSP 1 Score: 156.8 bits (395), Expect = 2.1e-35 Identity = 82/90 (91.11%), Postives = 84/90 (93.33%), Query Frame = 1
BLAST of Cucsa.321240 vs. NCBI nr
Match: gi|659095827|ref|XP_008448787.1| (PREDICTED: uncharacterized protein LOC103490852 isoform X1 [Cucumis melo]) HSP 1 Score: 156.8 bits (395), Expect = 2.1e-35 Identity = 82/90 (91.11%), Postives = 84/90 (93.33%), Query Frame = 1
BLAST of Cucsa.321240 vs. NCBI nr
Match: gi|720010195|ref|XP_010259170.1| (PREDICTED: uncharacterized protein LOC104598687 [Nelumbo nucifera]) HSP 1 Score: 77.4 bits (189), Expect = 1.6e-11 Identity = 38/101 (37.62%), Postives = 64/101 (63.37%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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