Cucsa.144280 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACATGGCTGGTAAAGAAATTATTTATCTGCCACTTTCTATAGATTGGAGTAACTAGTAAGTTTAGTTTTATAATTTTTGGCCTTTCTTTGTCTCTGTTATACTTGGAGAAAGAGTTGTTCTGGCACATCAGCACATGTTTTCAAGAAGTTCAGACATCGCATTGCATTTTGTTTGTTTTTTtCTATTTGAAACCATATCTGGAAGTTTATGTGTTTTGTAAGATATACAATCCCTAAGGTACACATGGCCTTTGAGGTGTTACTGTTGTATCAAGCTGTTGGATTCTTATCATAGCTGATTCAAAGAAACACTGACTACCATAGTTGTTGAAGTAGTTCATCAGAACTAATGAATTTGTTCGTTTTTGTGTTGCAGAGAATAAAAATATGGGTTTGAACCAAGTTAGTCTGTTTAGAAGGAGCATTATTGTTAATAGCAAAGACCCAATACAACTGACATCTGTCCAAACGAGGCAAATCAAAGAAGGGGTCTAAAGGGGGAGCAGCTGTTGATGCTCCTGAAGCATCGATTCTAAGTAAAGAGGTGAGGTCTACTACTGTAGTTGGTGCCAATATTCTCAAAGAAGGCGCAGATCCAAAAGGTATGGCAGACTTAGAGTACTCTGTTTGGCTTGATAAACATCCACCTCTAAGCAAATTGCGAAGGAAGAATATCCAAACCCTTTCCTATGCAGATCTCAAACGCTTTGTTAAATTAGATACTCGAGCAAGAATAGGAAAACAACTCTATCAGGACCAAGAACTGATGTAA ATGGACATGGCTGGCAAATCAAAGAAGGGGTCTAAAGGGGGAGCAGCTGTTGATGCTCCTGAAGCATCGATTCTAAGTAAAGAGGTGAGGTCTACTACTGTAGTTGGTGCCAATATTCTCAAAGAAGGCGCAGATCCAAAAGGTATGGCAGACTTAGAGTACTCTGTTTGGCTTGATAAACATCCACCTCTAAGCAAATTGCGAAGGAAGAATATCCAAACCCTTTCCTATGCAGATCTCAAACGCTTTGTTAAATTAGATACTCGAGCAAGAATAGGAAAACAACTCTATCAGGACCAAGAACTGATGTAA ATGGACATGGCTGGCAAATCAAAGAAGGGGTCTAAAGGGGGAGCAGCTGTTGATGCTCCTGAAGCATCGATTCTAAGTAAAGAGGTGAGGTCTACTACTGTAGTTGGTGCCAATATTCTCAAAGAAGGCGCAGATCCAAAAGGTATGGCAGACTTAGAGTACTCTGTTTGGCTTGATAAACATCCACCTCTAAGCAAATTGCGAAGGAAGAATATCCAAACCCTTTCCTATGCAGATCTCAAACGCTTTGTTAAATTAGATACTCGAGCAAGAATAGGAAAACAACTCTATCAGGACCAAGAACTGATGTAA MDMAGKSKKGSKGGAAVDAPEASILSKEVRSTTVVGANILKEGADPKGMADLEYSVWLDKHPPLSKLRRKNIQTLSYADLKRFVKLDTRARIGKQLYQDQELM*
BLAST of Cucsa.144280 vs. TrEMBL
Match: A0A0A0KYS4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G539610 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 7.6e-32 Identity = 74/92 (80.43%), Postives = 81/92 (88.04%), Query Frame = 1
BLAST of Cucsa.144280 vs. TrEMBL
Match: C6SYP3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G077100 PE=2 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 8.7e-28 Identity = 69/92 (75.00%), Postives = 75/92 (81.52%), Query Frame = 1
BLAST of Cucsa.144280 vs. TrEMBL
Match: A0A0B2RJC8_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_044758 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 8.7e-28 Identity = 69/92 (75.00%), Postives = 75/92 (81.52%), Query Frame = 1
BLAST of Cucsa.144280 vs. TrEMBL
Match: C6T5W2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G073700 PE=2 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 7.3e-27 Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 1
BLAST of Cucsa.144280 vs. TrEMBL
Match: A0A0B2S3N2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_049925 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 7.3e-27 Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 1
BLAST of Cucsa.144280 vs. TAIR10
Match: AT3G01740.1 (AT3G01740.1 Mitochondrial ribosomal protein L37) HSP 1 Score: 117.9 bits (294), Expect = 3.8e-27 Identity = 59/93 (63.44%), Postives = 72/93 (77.42%), Query Frame = 1
BLAST of Cucsa.144280 vs. TAIR10
Match: AT5G14290.1 (AT5G14290.1 Mitochondrial ribosomal protein L37) HSP 1 Score: 102.8 bits (255), Expect = 1.3e-22 Identity = 55/93 (59.14%), Postives = 71/93 (76.34%), Query Frame = 1
BLAST of Cucsa.144280 vs. NCBI nr
Match: gi|659083110|ref|XP_008442187.1| (PREDICTED: 54S ribosomal protein L37, mitochondrial isoform X2 [Cucumis melo]) HSP 1 Score: 145.6 bits (366), Expect = 4.9e-32 Identity = 75/92 (81.52%), Postives = 81/92 (88.04%), Query Frame = 1
BLAST of Cucsa.144280 vs. NCBI nr
Match: gi|659083108|ref|XP_008442186.1| (PREDICTED: 39S ribosomal protein L54, mitochondrial isoform X1 [Cucumis melo]) HSP 1 Score: 145.6 bits (366), Expect = 4.9e-32 Identity = 75/92 (81.52%), Postives = 81/92 (88.04%), Query Frame = 1
BLAST of Cucsa.144280 vs. NCBI nr
Match: gi|778695065|ref|XP_004144674.2| (PREDICTED: 39S ribosomal protein L54, mitochondrial-like [Cucumis sativus]) HSP 1 Score: 144.4 bits (363), Expect = 1.1e-31 Identity = 74/92 (80.43%), Postives = 81/92 (88.04%), Query Frame = 1
BLAST of Cucsa.144280 vs. NCBI nr
Match: gi|1009117870|ref|XP_015875550.1| (PREDICTED: 39S ribosomal protein L54, mitochondrial-like [Ziziphus jujuba]) HSP 1 Score: 138.7 bits (348), Expect = 6.0e-30 Identity = 73/92 (79.35%), Postives = 79/92 (85.87%), Query Frame = 1
BLAST of Cucsa.144280 vs. NCBI nr
Match: gi|351726465|ref|NP_001238663.1| (uncharacterized protein LOC100499962 [Glycine max]) HSP 1 Score: 131.0 bits (328), Expect = 1.2e-27 Identity = 69/92 (75.00%), Postives = 75/92 (81.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |