Cucsa.074540 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTAAGGAGGTTGAAGCTGAGGCAAAAGTTGGGGTTGGAATTGAAACTCTTTGGAAAGCTTTGGTTAAAGACTTGAGATTTATTGTTCCAAAGCTCATGCCCAACACTGTTGAAAAAGTTGAGCTCATTCATGGAGATGGTGGTCTTGGCTCTGTCTTGCTCTTCCATCTTGTTCATGGTGAGTCAGTTGATCTGGTTTTTTtCCTTTCTACACCTAATTTCTTTACTGCTTTCATCTAATTAATATTTGTCAATCCGCCTGGGTACTAGATTAGATTTTAGCTGTAATTAAATTTTCCCCAAATAAAAAAaTTCTCAAAGTTGATTAATTAGCATGAACTTAATTAATGTTTCCAGTATATATAAAAAATAAAAACTATAATATTAATCCAAAATCCAAATGATCTAATGCTATGAATGTAAAAGGGGTTTTACAGTGGGAAACATAGTTTAGAAAGAAAAAAAAaGTAATTAGAATATGATTTTGATTCAATACTGTAAAATTTCTTCGATATGATAAAATTTCGAACTAAATCTAAATTTTGTCACATTTGCAAATTTTTTTATTTTACTATATCTCCAAATCTTTGTATCATTGTTGAAAAAAATAAATTTTGGGTAGATAATCCAAATATTGAAAGGATGATTTGAGAGAGTATTGAAAAAGAAGGATATGATATTTGCAGATGAGGAGATGATGAAAAGGCAAAAGGAAAAGATAGTAAAACTTGATGAAACAAAGCATGAATTTGGGATAGAAGTGATGGAAGGAAACATATTGAAAAGAGGGTTTCGTTCTTTCAACACAACGTTCAGACTTTCTTCCATTAGTGAAAAGGAAACCCTCGTGGATTTCAAAGTTGTTTATGAAACTGAACTGAGTGATGATGAAGTTGAACAAACTCACTTGGAGAAAATGGCAACTTCCACAACTCTTTCTTTTTtCCAACTCTTGGAAAACTTTCTTCTTCATTCATCATGA ATGGTTAAGGAGGTTGAAGCTGAGGCAAAAGTTGGGGTTGGAATTGAAACTCTTTGGAAAGCTTTGGTTAAAGACTTGAGATTTATTGTTCCAAAGCTCATGCCCAACACTGTTGAAAAAGTTGAGCTCATTCATGGAGATGGTGGTCTTGGCTCTGTCTTGCTCTTCCATCTTGTTCATGATGAGGAGATGATGAAAAGGCAAAAGGAAAAGATAGTAAAACTTGATGAAACAAAGCATGAATTTGGGATAGAAGTGATGGAAGGAAACATATTGAAAAGAGGGTTTCGTTCTTTCAACACAACGTTCAGACTTTCTTCCATTAGTGAAAAGGAAACCCTCGTGGATTTCAAAGTTGTTTATGAAACTGAACTGAGTGATGATGAAGTTGAACAAACTCACTTGGAGAAAATGGCAACTTCCACAACTCTTTCTTTTTTCCAACTCTTGGAAAACTTTCTTCTTCATTCATCATGA ATGGTTAAGGAGGTTGAAGCTGAGGCAAAAGTTGGGGTTGGAATTGAAACTCTTTGGAAAGCTTTGGTTAAAGACTTGAGATTTATTGTTCCAAAGCTCATGCCCAACACTGTTGAAAAAGTTGAGCTCATTCATGGAGATGGTGGTCTTGGCTCTGTCTTGCTCTTCCATCTTGTTCATGATGAGGAGATGATGAAAAGGCAAAAGGAAAAGATAGTAAAACTTGATGAAACAAAGCATGAATTTGGGATAGAAGTGATGGAAGGAAACATATTGAAAAGAGGGTTTCGTTCTTTCAACACAACGTTCAGACTTTCTTCCATTAGTGAAAAGGAAACCCTCGTGGATTTCAAAGTTGTTTATGAAACTGAACTGAGTGATGATGAAGTTGAACAAACTCACTTGGAGAAAATGGCAACTTCCACAACTCTTTCTTTTTtCCAACTCTTGGAAAACTTTCTTCTTCATTCATCATGA MVKEVEAEAKVGVGIETLWKALVKDLRFIVPKLMPNTVEKVELIHGDGGLGSVLLFHLVHDEEMMKRQKEKIVKLDETKHEFGIEVMEGNILKRGFRSFNTTFRLSSISEKETLVDFKVVYETELSDDEVEQTHLEKMATSTTLSFFQLLENFLLHSS*
BLAST of Cucsa.074540 vs. Swiss-Prot
Match: PHBP_MEDTR (Phytohormone-binding protein OS=Medicago truncatula GN=MTR_3g055120 PE=1 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 5.5e-27 Identity = 62/160 (38.75%), Postives = 101/160 (63.12%), Query Frame = 1
BLAST of Cucsa.074540 vs. Swiss-Prot
Match: PR13_PETCR (Pathogenesis-related protein B OS=Petroselinum crispum GN=PCPR1-3 PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 3.8e-12 Identity = 43/154 (27.92%), Postives = 77/154 (50.00%), Query Frame = 1
BLAST of Cucsa.074540 vs. Swiss-Prot
Match: PR11_PETCR (Pathogenesis-related protein A OS=Petroselinum crispum GN=PCPR1-1 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.5e-11 Identity = 42/154 (27.27%), Postives = 76/154 (49.35%), Query Frame = 1
BLAST of Cucsa.074540 vs. Swiss-Prot
Match: RNS1_PANGI (Ribonuclease 1 OS=Panax ginseng PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.7e-07 Identity = 41/154 (26.62%), Postives = 75/154 (48.70%), Query Frame = 1
BLAST of Cucsa.074540 vs. Swiss-Prot
Match: IPRT1_CATRO (Probable intracellular pathogenesis-related protein T1 OS=Catharanthus roseus GN=PCKR3 PE=1 SV=2) HSP 1 Score: 56.2 bits (134), Expect = 3.7e-07 Identity = 32/131 (24.43%), Postives = 66/131 (50.38%), Query Frame = 1
BLAST of Cucsa.074540 vs. TrEMBL
Match: A0A0A0L2L0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099760 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 6.0e-81 Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 1
BLAST of Cucsa.074540 vs. TrEMBL
Match: A0A0A0L7W1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099770 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.1e-53 Identity = 110/158 (69.62%), Postives = 132/158 (83.54%), Query Frame = 1
BLAST of Cucsa.074540 vs. TrEMBL
Match: M5WW21_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014563mg PE=3 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.0e-32 Identity = 74/158 (46.84%), Postives = 106/158 (67.09%), Query Frame = 1
BLAST of Cucsa.074540 vs. TrEMBL
Match: A0A166AGT8_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_009980 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 8.9e-32 Identity = 71/155 (45.81%), Postives = 109/155 (70.32%), Query Frame = 1
BLAST of Cucsa.074540 vs. TrEMBL
Match: M5X3G2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017195mg PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 4.9e-30 Identity = 72/157 (45.86%), Postives = 108/157 (68.79%), Query Frame = 1
BLAST of Cucsa.074540 vs. TAIR10
Match: AT1G70880.1 (AT1G70880.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 49.3 bits (116), Expect = 2.6e-06 Identity = 34/111 (30.63%), Postives = 64/111 (57.66%), Query Frame = 1
BLAST of Cucsa.074540 vs. NCBI nr
Match: gi|449463170|ref|XP_004149307.1| (PREDICTED: phytohormone-binding protein-like [Cucumis sativus]) HSP 1 Score: 308.1 bits (788), Expect = 8.7e-81 Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 1
BLAST of Cucsa.074540 vs. NCBI nr
Match: gi|659102724|ref|XP_008452281.1| (PREDICTED: pathogenesis-related protein 2-like [Cucumis melo]) HSP 1 Score: 292.7 bits (748), Expect = 3.8e-76 Identity = 149/158 (94.30%), Postives = 154/158 (97.47%), Query Frame = 1
BLAST of Cucsa.074540 vs. NCBI nr
Match: gi|659102722|ref|XP_008452280.1| (PREDICTED: major pollen allergen Car b 1 isoform 2-like [Cucumis melo]) HSP 1 Score: 221.5 bits (563), Expect = 1.1e-54 Identity = 112/158 (70.89%), Postives = 133/158 (84.18%), Query Frame = 1
BLAST of Cucsa.074540 vs. NCBI nr
Match: gi|778676284|ref|XP_011650560.1| (PREDICTED: phytohormone-binding protein-like [Cucumis sativus]) HSP 1 Score: 217.6 bits (553), Expect = 1.5e-53 Identity = 110/158 (69.62%), Postives = 132/158 (83.54%), Query Frame = 1
BLAST of Cucsa.074540 vs. NCBI nr
Match: gi|1009110543|ref|XP_015896066.1| (PREDICTED: phytohormone-binding protein-like [Ziziphus jujuba]) HSP 1 Score: 156.0 bits (393), Expect = 5.5e-35 Identity = 77/158 (48.73%), Postives = 108/158 (68.35%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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