ClCG02G024310.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCCAAATTACATAACCGAACTTATGAAGATTTCGAACCTCCGGTGGAGCGGTCGGAAGAGGATGGCTGCACCATTCTCACCCTCTACATTCCCGGTTTGTCCCCCTAATTATATTTTCCTTTTTTCTTCTTTCTCATTAATTTCGTTCGCTGCTGATTTAATATATTGTGTTAGGAATACCCAAAATTAATATTAATTCATGTTAATAATTTATAAATATAGCAAAATTTAGTGTAAGAATCTTAATAATTTAGGCTTTTTGGTAATACAACTTATCGATTTTAAATTTGTTTGTGCTAATAAAGCTATTTGATGGAATTTTAGCTTTTTCAAAAATTTGGTATCTTGTCCTACCCATATCAAAGCTATCATTCTATTAATTTATTTTCTTACATTTATTATAAGTTTTAATTGGTTCAATTTTTTATGATAATTATTTAAAAGAATTTTTTTATAAAAAATTTAGATTAAACAATATTAGTTAGATATTTTTAAATAATTATCTTACAGTAAATTATAAATTAAATATGAATATAGAAAATAATTGAAATGATAATTTGGTTTTTCTTTTCATATAAATATATTGCACAAAATTAATATTAATTTACTAAATATGGTAACTATTTTTTTTAATTTTGAAATTAAGCTTTACAGACACTATTTTAATTTTTCCGCAACTAAATTTTTCTAAAAGTATAACTACAACAATTAGCCAATATGAATATAATTTAATTGACATAAAAATTGTATTATCAACCGATTATCCCATCTCACATCTATTTTAATCAACTAACATAGAATTCATTTTAAATTTGCTATGATTTTGAAATATGGAATACACTAAAAAGTGGAAGTCTTTTAGCACGAAAAAAAAAAAAAAAACAAACAAAACGTACTCTAATCTTGTATTGTTGTACAATAATCGGGAATGAAAATCAAAACTTCAACCTCTAAGATTAAAATTTATGTCAATTATCACTAAATTAAGTTCACCTTGGAATATGGTGTCACCAATTAATGATACACTCTAGGCTTCAGCAAGGAGCAAATTCAGGTTAAGGTATCCTCAAGAAGAAAGTTGAGGATTAGTGGGGAACGGCCTTACAAGAACAGCAAGAGCGCATGGCAGCGCTTCCACAAGGAGTTTGAAATCGCATCAAACTGCGACACTGCCAGCATTAGCGCCAAATACAAGGGCGGCATCCTTCATGTCCGCCAACCATTGTTGCAGGACCAGTCCGAGCCACGCACACCACCCCATGACCAAACCCCCAAACAACAAGCTGAGAACCCAATTTTGGAAGAACCAAAGCAAACTAATTCAACTGCCAACCACCACGCTCCGGTTACAAACACTCCGAAGATCAACAACAAGCGCTTGAAGGAGATGATTCCCGGAGTGTTCCTGAAGTTGGGGTTCTCTATTTTGCTCCCACTTATCTTATTG ATGGCATCCAAATTACATAACCGAACTTATGAAGATTTCGAACCTCCGGTGGAGCGGTCGGAAGAGGATGGCTGCACCATTCTCACCCTCTACATTCCCGGTTTAAAGTTGAGGATTAGTGGGGAACGGCCTTACAAGAACAGCAAGAGCGCATGGCAGCGCTTCCACAAGGAGTTTGAAATCGCATCAAACTGCGACACTGCCAGCATTAGCGCCAAATACAAGGGCGGCATCCTTCATGTCCGCCAACCATTGTTGCAGGACCAGTCCGAGCCACGCACACCACCCCATGACCAAACCCCCAAACAACAAGCTGAGAACCCAATTTTGGAAGAACCAAAGCAAACTAATTCAACTGCCAACCACCACGCTCCGGTTACAAACACTCCGAAGATCAACAACAAGCGCTTGAAGGAGATGATTCCCGGAGTGTTCCTGAAGTTGGGGTTCTCTATTTTGCTCCCACTTATCTTATTG ATGGCATCCAAATTACATAACCGAACTTATGAAGATTTCGAACCTCCGGTGGAGCGGTCGGAAGAGGATGGCTGCACCATTCTCACCCTCTACATTCCCGGTTTAAAGTTGAGGATTAGTGGGGAACGGCCTTACAAGAACAGCAAGAGCGCATGGCAGCGCTTCCACAAGGAGTTTGAAATCGCATCAAACTGCGACACTGCCAGCATTAGCGCCAAATACAAGGGCGGCATCCTTCATGTCCGCCAACCATTGTTGCAGGACCAGTCCGAGCCACGCACACCACCCCATGACCAAACCCCCAAACAACAAGCTGAGAACCCAATTTTGGAAGAACCAAAGCAAACTAATTCAACTGCCAACCACCACGCTCCGGTTACAAACACTCCGAAGATCAACAACAAGCGCTTGAAGGAGATGATTCCCGGAGTGTTCCTGAAGTTGGGGTTCTCTATTTTGCTCCCACTTATCTTATTG MASKLHNRTYEDFEPPVERSEEDGCTILTLYIPGLKLRISGERPYKNSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQDQSEPRTPPHDQTPKQQAENPILEEPKQTNSTANHHAPVTNTPKINNKRLKEMIPGVFLKLGFSILLPLILL
BLAST of ClCG02G024310.1 vs. TrEMBL
Match: A0A0A0L1N9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G269140 PE=3 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.0e-40 Identity = 102/181 (56.35%), Postives = 118/181 (65.19%), Query Frame = 1
BLAST of ClCG02G024310.1 vs. TrEMBL
Match: A0A0J8BYF2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g171580 PE=3 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 6.8e-16 Identity = 50/123 (40.65%), Postives = 74/123 (60.16%), Query Frame = 1
BLAST of ClCG02G024310.1 vs. TrEMBL
Match: A0A0K9RJ74_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_066390 PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.3e-14 Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = 1
BLAST of ClCG02G024310.1 vs. TrEMBL
Match: A0A0J8BYE8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g171590 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.9e-14 Identity = 54/138 (39.13%), Postives = 70/138 (50.72%), Query Frame = 1
BLAST of ClCG02G024310.1 vs. TrEMBL
Match: K4DAL3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.1e-13 Identity = 48/123 (39.02%), Postives = 68/123 (55.28%), Query Frame = 1
BLAST of ClCG02G024310.1 vs. NCBI nr
Match: gi|659097901|ref|XP_008449876.1| (PREDICTED: uncharacterized protein LOC103491622 [Cucumis melo]) HSP 1 Score: 181.0 bits (458), Expect = 1.6e-42 Identity = 107/181 (59.12%), Postives = 119/181 (65.75%), Query Frame = 1
BLAST of ClCG02G024310.1 vs. NCBI nr
Match: gi|449463865|ref|XP_004149651.1| (PREDICTED: uncharacterized protein LOC101219748 [Cucumis sativus]) HSP 1 Score: 174.5 bits (441), Expect = 1.5e-40 Identity = 102/181 (56.35%), Postives = 118/181 (65.19%), Query Frame = 1
BLAST of ClCG02G024310.1 vs. NCBI nr
Match: gi|731348452|ref|XP_010685493.1| (PREDICTED: protein piccolo-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 92.0 bits (227), Expect = 9.8e-16 Identity = 50/123 (40.65%), Postives = 74/123 (60.16%), Query Frame = 1
BLAST of ClCG02G024310.1 vs. NCBI nr
Match: gi|902221394|gb|KNA18912.1| (hypothetical protein SOVF_066390 [Spinacia oleracea]) HSP 1 Score: 87.8 bits (216), Expect = 1.8e-14 Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = 1
BLAST of ClCG02G024310.1 vs. NCBI nr
Match: gi|731348454|ref|XP_010685494.1| (PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 86.7 bits (213), Expect = 4.1e-14 Identity = 54/138 (39.13%), Postives = 70/138 (50.72%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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