Csa4G000980.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGAGGCAATGGTCAGAAGGCTAAGATGGCTCGTGAGAGAAACTTGGAGAAACAAAAAGGCGCCAAGGGTACTTTTTTCTTTATCCACCCCTTTTTTCTTCGTTTCACTAAACTTCTATTGCCCCCCTCGTTTACCCTTTTGAATTCTTCTCTTTTTCGTTGTTGATCTGATGTTTTGCAGGAAGCCAGCTTGATTCCAACAAAAAAGCTATGACTATTCAGGTACTTCCGTTGATTCCAGTGCTTATTGTTCTTTTCCCTTTTCTTTTCGTTTTCGGAATTGGATTGTCCACTTGATCTACTTCAATTTTATCCCTCATTGGGTTGTGACAGAAAAAGGGTTTATACATAATACTAATGGAAATTGACCCGCTAGCTCGTTTGATTTAAGCATTTTATTATTAGTCTTGTGGATGAAAATTAACAGTTGGGATAGAGTACATCATGATTGGGTTTTGGTTAACTAACAATTTTCCTCCTAGCAAACAAGGAACTACGTTGCGGCTGCCTGTAGATTTTTATATTTTTTTTAATTTTTGAGAAACAATTTCTTGGAGACCATGAAAATATGAAAGAAGAGGAAAGCCAACCCTCGGGTTCAAGGAGATTGCAAGAGTTTTCGACTGGCCAAAACACTGTTAATACTGTCATTGTGGAAAGGAGAAGTTTACACTATGAGAGAGCCAAAATGGATAAAGAAGTCTGTAAACGAATCAAAGGAGTTTGCTTTATATTTGAAGGTTCTATGATTTCTTTCAAGCCAAAGGGTCTGGAAAAGGCCTTTATTAGGTGTAGTTAGAGGACCTACTCTTTTTGAATGGATGGCTGCCATTATCATGGGAAGAAGGGTGCTTGTGTTTGGAGAGGGCCAGCTAGTAGATCTAATTGAGTGATCCCAGCATGGACCTTTTTTACCCTGAAAATTTATACCCCAATGTCTCTTACTCCAACTTGGGATGATTTATCATTGTAGTACGACTTTCAGAGGAGATATGTGCATCGACTCCTTTGGTAGTCATTCTTTCAGTCTAAATTATAGGGTTAATCTAAGACCTGGGACTGTAGGAATATAGGAAAACTTACACCGATCTTATATTTACTATCCAATTTCCACTCAACTGGTTCAGCTTTTTGTTCTCAATGTCCCAGCTTTATTTGTTGGTATCTTTGTGATCATCACCTGAGCATATTACAAGGGAAAATTCAATCATATAATATGTGGAAGTATAGACGAAGGGCCCGTTAAGTAACACTTTCGTTTCTCGTTTCTTTTTTTATTAATTCATGATTCTATTTTCCTCTTCTTTAATTGTTTCTTATTTCTGGTTTTTTGTTCTTTCTTTTTTACCTTAAACAAAAACATGATTGGTAGTGATTTCAATAAAATGAGAAACAAAGAACAGTTTCCTAAAGTTAATTAGAATATTAACTAATTACCCAACTAACCCCTTTTCTTCTTTCATCACTGTCTCACTGCATAGGAACAACATTGTAAACTTAAGTGGCTTCTTGAGGGGCATGAAATTACTCAGTTTTTCCACTGTATTATTGCTGCTTGCTAACGTAAAAGCTTGATATCTGACATTCTTTCCCAAGATTGAGTTAGTTTATTGTTAGCACTTGACATTGAGGTTGAATTTCTGTCGAGTTTATTCACTAAGGACAGTAATCAACGTTTCCTTCCCACTAATTTAGAGTGGAGTCCTATTGCCTCTGCGGCAAGTAATCTTGAATGACCCCTTACTAAAGAAGAGGTTTTTGCAGCTATCTCTCCTTGTTCTCCTTGGAGGATTATTTGTCAGACTATTGATATGGTGTTGGTCGTATTTGACATCGGCTTGGTGATGGCTCTACCAGATTTTCTTGGAACGATTCTTGGCTTAGTTGTGGTATTCTTTATTGTGTCTTCCCACAACTTTTTCGTCTTACTCTGTGTAGAGGTTATCGTGGCTAATGTGTGGATTCCATTTACAAATGCTTGGGATTTTCAATTATGTCGTAATCTTACTTACATAGTTGGGGATTTTGGAATGGACATTCTTATCTCAACATGTGTACTATCAGATTGCGATCTTTACTTGACTCCTGGATTTGGCCTATTGATTCCTCTTCGGTTTTTATTGCAAATCTCTTGTGACTGATTTGGGCACGGTAGACCCTTTTTGACAGATCTTTAGTTAGTTATTTGGAATGATGGTTAAGGATTAAAATCCGTCTCTAGGAGCTTAGACTAGGTGCCTTCAATAATGCTGATCATTTACATCTTCGAATATTGTATTTGTCTATTTCTTCTTGCTAGTATCTTTTCGAGACTCCTTTTCGTCTTTTTCATCCATAAAATAATTTTTAAAATAATGCACATCCTTGTCAATGTTTAAACATGAAATATTGTATAATGTAAGAAGTTGAATATGCATACTTTTGATTGTATCTCCAATCCCTTTAGGGCGTTGAATTAAGTGATGAAGTATGAAGTTAGTGAATCTATGTTTGTGGTGTAGAGTTGTGAAGATAGGGTTCCTTGATAAACGTACAAAAGAGAAAAAGTGGTTTCTCAATAAATGTGCAAAACATACTTATGAAGGTTGGGGCCAAACAACCTCTTAGTGATATTATAGGTCCGACTAGTAAATGGAGCATCTCACCAAAATACAACTTCCAAACGAAAAGTTTTATCTCAAAATCCTTTCCAGTTCCCATCTTCTCCCACCATTCTTTTGTACTTTTTACCGCTTTTGTCACACATTGGGGATTTTGCCCACCCCAAAGTCAGCTCCGGGCAAACAAAAGTTTGAAATTATAGTTACTTCTCAATTTTGGGGTTGATCTTCACTAGAAGATATCATACCTGTAAATATTTCAAGCCTTTGATTCAAGAACATCTTGTGGAAATCCACTTTAGTGGACTTTTTTATCGTGAATCTTTCTCTGATTTCACTTTTTAGTTTACATTTCAAAATTTGAACTTCAGGAACATCTCATGGGAATCCACTCTAGTGGATTTTTTCTCGCGAATCTTCTCTGATTTCACTTGTTGGGTTACACTTCAAATTTTGAACTTCATTTCATCCCGTCGATGTGTGCAATGATTTATATTTTTGCTTGTAATAACTGCCATCGCTTTTTTAATTTCGATTAAGACTACTTACTCAAGAAAAGTTTGAAAGTTTATGATTAGATAGTAGATTCCTTATTATGAACACTGATGAGCGAACTGATCTTTGGATTCTACAGTGCAAGGTGTGCATGCAAACATTCATGTGTACCACCTCAGAGGTGAAATGTAGGGAGCATGCTGAAGCAAAACACCCCAAATCTGATGTTTTCACCTGTTTCCCCCATCTTCAAAAGTGA ATGGGAGGAGGCAATGGTCAGAAGGCTAAGATGGCTCGTGAGAGAAACTTGGAGAAACAAAAAGGCGCCAAGGGAAGCCAGCTTGATTCCAACAAAAAAGCTATGACTATTCAGTGCAAGGTGTGCATGCAAACATTCATGTGTACCACCTCAGAGGTGAAATGTAGGGAGCATGCTGAAGCAAAACACCCCAAATCTGATGTTTTCACCTGTTTCCCCCATCTTCAAAAGTGA ATGGGAGGAGGCAATGGTCAGAAGGCTAAGATGGCTCGTGAGAGAAACTTGGAGAAACAAAAAGGCGCCAAGGGAAGCCAGCTTGATTCCAACAAAAAAGCTATGACTATTCAGTGCAAGGTGTGCATGCAAACATTCATGTGTACCACCTCAGAGGTGAAATGTAGGGAGCATGCTGAAGCAAAACACCCCAAATCTGATGTTTTCACCTGTTTCCCCCATCTTCAAAAGTGA MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDVFTCFPHLQK*
BLAST of Csa4G000980.1 vs. Swiss-Prot
Match: Y2309_ARATH (Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090 PE=1 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.5e-30 Identity = 62/78 (79.49%), Postives = 68/78 (87.18%), Query Frame = 1
BLAST of Csa4G000980.1 vs. TrEMBL
Match: A0A0A0KV37_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000980 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 5.3e-38 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1
BLAST of Csa4G000980.1 vs. TrEMBL
Match: I3SCL1_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 9.4e-35 Identity = 71/77 (92.21%), Postives = 75/77 (97.40%), Query Frame = 1
BLAST of Csa4G000980.1 vs. TrEMBL
Match: B4UWA0_ARAHY (Putative uncharacterized protein OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 1.6e-34 Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 1
BLAST of Csa4G000980.1 vs. TrEMBL
Match: A0A067KZL2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16048 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 3.6e-34 Identity = 68/77 (88.31%), Postives = 75/77 (97.40%), Query Frame = 1
BLAST of Csa4G000980.1 vs. TrEMBL
Match: J3LQ39_ORYBR (Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 4.6e-34 Identity = 69/77 (89.61%), Postives = 74/77 (96.10%), Query Frame = 1
BLAST of Csa4G000980.1 vs. TAIR10
Match: AT2G23090.1 (AT2G23090.1 Uncharacterised protein family SERF) HSP 1 Score: 132.9 bits (333), Expect = 8.6e-32 Identity = 62/78 (79.49%), Postives = 68/78 (87.18%), Query Frame = 1
BLAST of Csa4G000980.1 vs. NCBI nr
Match: gi|449469126|ref|XP_004152272.1| (PREDICTED: uncharacterized protein At2g23090 [Cucumis sativus]) HSP 1 Score: 164.5 bits (415), Expect = 7.6e-38 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1
BLAST of Csa4G000980.1 vs. NCBI nr
Match: gi|388499874|gb|AFK38003.1| (unknown [Lotus japonicus]) HSP 1 Score: 153.7 bits (387), Expect = 1.3e-34 Identity = 71/77 (92.21%), Postives = 75/77 (97.40%), Query Frame = 1
BLAST of Csa4G000980.1 vs. NCBI nr
Match: gi|1012126788|ref|XP_015963855.1| (PREDICTED: uncharacterized protein At2g23090 [Arachis duranensis]) HSP 1 Score: 152.9 bits (385), Expect = 2.3e-34 Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 1
BLAST of Csa4G000980.1 vs. NCBI nr
Match: gi|802570652|ref|XP_012068249.1| (PREDICTED: uncharacterized protein At2g23090-like [Jatropha curcas]) HSP 1 Score: 151.8 bits (382), Expect = 5.1e-34 Identity = 68/77 (88.31%), Postives = 75/77 (97.40%), Query Frame = 1
BLAST of Csa4G000980.1 vs. NCBI nr
Match: gi|747056236|ref|XP_011074376.1| (PREDICTED: uncharacterized protein At2g23090 [Sesamum indicum]) HSP 1 Score: 151.8 bits (382), Expect = 5.1e-34 Identity = 69/77 (89.61%), Postives = 75/77 (97.40%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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