MELO3C020912 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C020912
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRed chlorophyll catabolite reductase
Locationchr11 : 2891756 .. 2894466 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCCATAATCTAATCCAAGTTTTTGTCCAGTGGGTTTAACAAAGCATTTACCGTTCGTACAAAGAGAGATGAAACTCACTGCCAATGGCGTTGATGGTTTATGCATCCGCAAAACCTTTTAGTCTTCCAACGCTGGTAGCAGCACAATCTTGTTTCAGAGCAAGGAAACCGGCAAGGGTAATGAGGAGCACGTCGTCACACATGGCGGAGGGATCGTCCTCGAAGCTGAAGGAATTTCCGCATCTATCGACTTCCCAAAGAGCTCTGATGGCCGATCTCATCAACGCTATAGAAGATCGGTTCGAGGATCGTCTTCTTCCTTGTACGCTTCCTCCTGATGTTGAGTATTACCAGAATCAGAGCGGGACTTCGGAAGGCGCTCTTCTCATCAGATCTGGCTCGCCGGACTCTTCGGTATTCCTCTCTATCTCTTTCTTGAAAGATTTTGTGGGTCTGATCTGCTTTCGAGTTTCCATTTTCGGAAGGTTTTGCATTTTGGGGGTTTGGTTCGAATTTCTTGAACGATGGTGTGGGAAATTTCGATGAATAAAGTTGAGGTTTAATTACAAATTAATTAAATTACGGAGAAAAATACATTTTTCCTTCTAGTTTTTTTATCTACGTAATTAATTAAGTTTTAATTACAAATTAATTAAGTACTATTTCAATTTAGGGCCTTATTTTTCATGATTTTACACTTTTAACTAGATTTTAAACTAAAATTCTTACTTTTGGCAATTGACAGGGTTGTATACGGTCCGGTTCGACTCAATTTGAGTCTCGAACCGATTTGAATATTGTTCAAATACCACGAACCGCAACCATTTAGAATATTGCCCATTTTTTTTTGAAATAAAACACAAATATTTAATATATATTTTATCGGACCATTTTGGATCTATTATGTTTGGTTCGGGTAAAACCGTAGAAAAACCGTCACCACCAAAACCGAATCTATATCAGTTTTGGCCGGTTTGAACGGTTTTTTTCAATTCTTACATCCCTAATGGAAAATGGTGTTTTTTAATTAATTTAAAATAAGTAGTTAATTTAAAAATTAAATTTAATAGTGATAAAAAATTAATAATAAAACTTAATTAACCATACTCTTTTGTTCTTCTACATTAATTAATAGTAGAAGTGTGGTTAAAAGTGTAAATTTTAAATGTGAATGGCTAAATTGAAGTTATAGAAATTTCAAATTTCAATGATGTAGAAATTTAAAAACTAAATTAAAAATCAAACTTCAAATTTGACATCCGTAAATTTTATATCTAAATTCGTAGTTATCAAATAAAAACTAGACCTAAAATTCAAGACTAACAGATAGATATTAGTTTTTAAATTACATGTTTAGTACTCTAATCGTATTATTTATTCGTGTGAAGTTTGTTTTTCTTTTTTTGATTAAATATTAGTCATGTGAAGTTGAGTGTCTCAAAGGTCAAACTTTCACTTTTTATATTCAATAATCTCTTTAAATTTTATTTTGTTGCATTGACCTATTCATTATGTCTTCTATTTTCTTTAACATAGAATTTAAATTCATATTCAAATCCAAATTTAATAGATTAATCTATTTTTCTATATGTGTCATTTTAGGAAGAAAGGAAGAAAAGTTGAAATTGAGTGGTCTATTAGGTACAAACTTGAAATTCATGACCGATTGTAATTTGACCTTTGAACATTTATCTCTTATTAATCTTATGAGACTATGTTGCAAGATATGAGGTCCAAAGAATTAAAAACTTTTTTTTGTTGACATTAGGAATAGTAACTATTGAATCTATTTTGTTTCACATTTGGTATTCAAGGAAGTATGTCTTCTTTACTGAAAGTTTGCTAATTTTGACAAAATTTATAATGCCCCATAAATTCCAATTGAACAAAAAATTCTAATTTTGTTTATGATTTGATCCATTCTTGTAATGCTACAAAATTAAAATTTCTAAACTTCTGTCTCAGATCAATTTCATATTGGCAAGTTGGTTGCACAGTCAATTACCAACTGGAGCATCACTAAACATAGCAAGCCTTTCTGCCTACTTGAGACCTTCAACTGATGCTCCAAATTTCCTCATAGAGTTCATCCAAAGCTCTCCAACCTCCCTCATTCTCATTCTCGATCTTCCTCCTCGAAAGGATCCCGTCCTCAACCCCGACTACCTCCAATCTTTCTACGAAGACACAAGATTAGACACTTATCGCAAAACCATTGAAGAACTTCCCGAGACTCGACCGTACGTCATGTCCTCGCTTTTCTTTCGCTCCTTGGTTTCTCCAACTTCCATAATTTCTCGTATCGATACAGAATCAGGTGGACCTGAACGCATGGAGGAGATTATAAAGAACCACGTCGGTCCCATTGCGAGAGATGTAGTTCGAGTATGGGTAGATGAATGTGCTTGCAAGGAGAGAGAGGTTGGAATGATGGAAAGAGTTGAACTTGAGAAAAGAGATAAGTTAGTTAAGAAGAAAACTATTGACATAGATTTGGGTTCTAGTTTGCCAAGATTGTTTGGACAGGAAGTAGCTGATAGAGTAGTGGCTGCTATTCAACGAGTCTTTGATGAAGCATGAGACTGTTTTGCTTTTGTTAATGTGTAGTGTATTATTGAGTTTTAAATGTCTCACTTGTAAATTGCAATGGAAGAAGTTAGATCTCTTGATAATTATTTTGGTAATTGAATTTATGGTTTTCAAATTTCTTA

mRNA sequence

ACCCATAATCTAATCCAAGTTTTTGTCCAGTGGGTTTAACAAAGCATTTACCGTTCGTACAAAGAGAGATGAAACTCACTGCCAATGGCGTTGATGGTTTATGCATCCGCAAAACCTTTTAGTCTTCCAACGCTGGTAGCAGCACAATCTTGTTTCAGAGCAAGGAAACCGGCAAGGGTAATGAGGAGCACGTCGTCACACATGGCGGAGGGATCGTCCTCGAAGCTGAAGGAATTTCCGCATCTATCGACTTCCCAAAGAGCTCTGATGGCCGATCTCATCAACGCTATAGAAGATCGGTTCGAGGATCGTCTTCTTCCTTGTACGCTTCCTCCTGATGTTGAGTATTACCAGAATCAGAGCGGGACTTCGGAAGGCGCTCTTCTCATCAGATCTGGCTCGCCGGACTCTTCGATCAATTTCATATTGGCAAGTTGGTTGCACAGTCAATTACCAACTGGAGCATCACTAAACATAGCAAGCCTTTCTGCCTACTTGAGACCTTCAACTGATGCTCCAAATTTCCTCATAGAGTTCATCCAAAGCTCTCCAACCTCCCTCATTCTCATTCTCGATCTTCCTCCTCGAAAGGATCCCGTCCTCAACCCCGACTACCTCCAATCTTTCTACGAAGACACAAGATTAGACACTTATCGCAAAACCATTGAAGAACTTCCCGAGACTCGACCGTACGTCATGTCCTCGCTTTTCTTTCGCTCCTTGGTTTCTCCAACTTCCATAATTTCTCGTATCGATACAGAATCAGGTGGACCTGAACGCATGGAGGAGATTATAAAGAACCACGTCGGTCCCATTGCGAGAGATGTAGTTCGAGTATGGGTAGATGAATGTGCTTGCAAGGAGAGAGAGGTTGGAATGATGGAAAGAGTTGAACTTGAGAAAAGAGATAAGTTAGTTAAGAAGAAAACTATTGACATAGATTTGGGTTCTAGTTTGCCAAGATTGTTTGGACAGGAAGTAGCTGATAGAGTAGTGGCTGCTATTCAACGAGTCTTTGATGAAGCATGAGACTGTTTTGCTTTTGTTAATGTGTAGTGTATTATTGAGTTTTAAATGTCTCACTTGTAAATTGCAATGGAAGAAGTTAGATCTCTTGATAATTATTTTGGTAATTGAATTTATGGTTTTCAAATTTCTTA

Coding sequence (CDS)

ATGGCGTTGATGGTTTATGCATCCGCAAAACCTTTTAGTCTTCCAACGCTGGTAGCAGCACAATCTTGTTTCAGAGCAAGGAAACCGGCAAGGGTAATGAGGAGCACGTCGTCACACATGGCGGAGGGATCGTCCTCGAAGCTGAAGGAATTTCCGCATCTATCGACTTCCCAAAGAGCTCTGATGGCCGATCTCATCAACGCTATAGAAGATCGGTTCGAGGATCGTCTTCTTCCTTGTACGCTTCCTCCTGATGTTGAGTATTACCAGAATCAGAGCGGGACTTCGGAAGGCGCTCTTCTCATCAGATCTGGCTCGCCGGACTCTTCGATCAATTTCATATTGGCAAGTTGGTTGCACAGTCAATTACCAACTGGAGCATCACTAAACATAGCAAGCCTTTCTGCCTACTTGAGACCTTCAACTGATGCTCCAAATTTCCTCATAGAGTTCATCCAAAGCTCTCCAACCTCCCTCATTCTCATTCTCGATCTTCCTCCTCGAAAGGATCCCGTCCTCAACCCCGACTACCTCCAATCTTTCTACGAAGACACAAGATTAGACACTTATCGCAAAACCATTGAAGAACTTCCCGAGACTCGACCGTACGTCATGTCCTCGCTTTTCTTTCGCTCCTTGGTTTCTCCAACTTCCATAATTTCTCGTATCGATACAGAATCAGGTGGACCTGAACGCATGGAGGAGATTATAAAGAACCACGTCGGTCCCATTGCGAGAGATGTAGTTCGAGTATGGGTAGATGAATGTGCTTGCAAGGAGAGAGAGGTTGGAATGATGGAAAGAGTTGAACTTGAGAAAAGAGATAAGTTAGTTAAGAAGAAAACTATTGACATAGATTTGGGTTCTAGTTTGCCAAGATTGTTTGGACAGGAAGTAGCTGATAGAGTAGTGGCTGCTATTCAACGAGTCTTTGATGAAGCATGA

Protein sequence

MALMVYASAKPFSLPTLVAAQSCFRARKPARVMRSTSSHMAEGSSSKLKEFPHLSTSQRALMADLINAIEDRFEDRLLPCTLPPDVEYYQNQSGTSEGALLIRSGSPDSSINFILASWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDPVLNPDYLQSFYEDTRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRIDTESGGPERMEEIIKNHVGPIARDVVRVWVDECACKEREVGMMERVELEKRDKLVKKKTIDIDLGSSLPRLFGQEVADRVVAAIQRVFDEA*
Homology
[Close]
BLAST of MELO3C020912 vs. Swiss-Prot
Match: RCCR_ARATH (Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis thaliana GN=RCCR PE=1 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 8.8e-77
Identity = 143/310 (46.13%), Postives = 208/310 (67.10%), Query Frame = 1 

Query: 5   VYASAKPFSLPTLVAAQSCFRARKPARVMRSTSSHMAEGSSSKLKEFPHLSTSQRALMAD 64
           +Y+S+ P  L  L +  S F      R    +     +    K  EFP++S +++ LM D
Sbjct: 9   LYSSSSPSYLSPLTSKPSRFSKNLRPRAQFQSMEDHDDHLRRKFMEFPYVSPTRKQLMVD 68

Query: 65  LINAIEDRFEDRLLPCTLPPDVEYYQNQSGTSEGALLIRSGSPDSSINFILASWLHSQLP 124
           L++ +E+R + +LLPC LPPDV  + N +G++E +L IRSG   S I+F++ SW+H ++P
Sbjct: 69  LMSTVENRLQSQLLPCNLPPDVRNFNNPNGSAEASLHIRSGDKSSPIDFVIGSWIHCKIP 128

Query: 125 TGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDPVLNPDYLQSFYED 184
           TG SLNI S+S +L  ST APNF++E IQSS  SL+LILDLP RKD VLNPDYL+ +Y+D
Sbjct: 129 TGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLPHRKDLVLNPDYLKEYYQD 188

Query: 185 TRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRIDTESGGPERMEEIIKNHVGPI 244
           T LD++R+++ +LPE  PYV  SLF RS  SPT+ + +ID E    +++EEI+++HV P 
Sbjct: 189 TALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAEE--EDKLEEILRDHVSPA 248

Query: 245 ARDVVRVWVDECACKERE---VGMMERVELEKRDKLVKKKTIDIDLGSSLPRLFGQEVAD 304
           A++V+ VW++ C  +E E   VG  ER+ELE+RDK  ++K+I+ DL    PR+FG+EV+ 
Sbjct: 249 AKEVLEVWLERCVKEEEEKIVVGEEERMELERRDKSFRRKSIEDDLDLQFPRMFGEEVSS 308

Query: 305 RVVAAIQRVF 312
           RVV AI+  F
Sbjct: 309 RVVHAIKEAF 316

[Close]
BLAST of MELO3C020912 vs. Swiss-Prot
Match: RCCR_HORVU (Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare GN=rccR PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.5e-49
Identity = 92/201 (45.77%), Postives = 140/201 (69.65%), Query Frame = 1 

Query: 111 INFILASWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKD 170
           I+F+L S LH ++P GA ++I SL   L  STDAP+F++EFIQ SPTS++++LDL PRKD
Sbjct: 1   IDFMLQSSLHCKVPNGA-IDITSLFINLNASTDAPHFIMEFIQGSPTSMVVLLDLLPRKD 60

Query: 171 PVLNPDYLQSFYEDTRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRIDTESGGP 230
             L+P+Y++ +YEDT +D  RK IE+LP+ RPY+  SLF RS  SPT++   ID   GG 
Sbjct: 61  LALHPEYIEKYYEDTEVDKQRKIIEQLPQARPYLSPSLFVRSAFSPTAVFFTIDCGKGGE 120

Query: 231 ERMEEIIKNHVGPIARDVVRVWVDECACKEREVGMMERVELEKRDKLVKKKTIDIDLGSS 290
             +EEI+  H+  + + ++++W+D CA    E+   ER  + KRD+ V+ K+I++DL ++
Sbjct: 121 GTLEEIVHGHLASVVKGILQIWLDTCASDASEMEEGEREIMVKRDRTVRSKSIEVDLTAN 180

Query: 291 LPRLFGQEVADRVVAAIQRVF 312
           LPR+FG +V+ R++A I++ F
Sbjct: 181 LPRMFGPDVSGRIIAEIRKAF 200

[Close]
BLAST of MELO3C020912 vs. TrEMBL
Match: A0A0A0LJH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285300 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 1.5e-163
Identity = 295/314 (93.95%), Postives = 305/314 (97.13%), Query Frame = 1 

Query: 1   MALMVYASAKPFSLPTLVAAQSCFRARKPARVMRSTSSHMAEGSSSKLKEFPHLSTSQRA 60
           MALMVYASAKPFSLP LV AQS FRA KPARV+RST+SHMAEGSSSKLK+FPHLS+SQRA
Sbjct: 1   MALMVYASAKPFSLPPLVPAQSSFRATKPARVIRSTASHMAEGSSSKLKDFPHLSSSQRA 60

Query: 61  LMADLINAIEDRFEDRLLPCTLPPDVEYYQNQSGTSEGALLIRSGSPDSSINFILASWLH 120
           LM DLINAIEDRFEDRLLPCTLPPDVEYYQNQSG SEGALLIRSGSPDSSINFILASWLH
Sbjct: 61  LMGDLINAIEDRFEDRLLPCTLPPDVEYYQNQSGNSEGALLIRSGSPDSSINFILASWLH 120

Query: 121 SQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDPVLNPDYLQS 180
           SQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKD VLNPDYLQS
Sbjct: 121 SQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDYLQS 180

Query: 181 FYEDTRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRIDTESGGPERMEEIIKNH 240
           FYEDTRLDTYRKTIEELPE RPY+MSSLFFRSLVSPTSIISR+DTESGGPERMEEIIKNH
Sbjct: 181 FYEDTRLDTYRKTIEELPEARPYIMSSLFFRSLVSPTSIISRVDTESGGPERMEEIIKNH 240

Query: 241 VGPIARDVVRVWVDECACKEREVGMMERVELEKRDKLVKKKTIDIDLGSSLPRLFGQEVA 300
           VGPIARD+VRVWVDECACKEREVGMMERVE+EKRD L+KKKTIDIDLGSSLPRLFGQEVA
Sbjct: 241 VGPIARDMVRVWVDECACKEREVGMMERVEIEKRDGLIKKKTIDIDLGSSLPRLFGQEVA 300

Query: 301 DRVVAAIQRVFDEA 315
           DRVVAAIQ+VFDEA
Sbjct: 301 DRVVAAIQQVFDEA 314

[Close]
BLAST of MELO3C020912 vs. TrEMBL
Match: D1MWY7_CITLA (Red chlorophyll catabolite reductase OS=Citrullus lanatus subsp. vulgaris GN=CitRCCR PE=2 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 1.3e-156
Identity = 279/312 (89.42%), Postives = 298/312 (95.51%), Query Frame = 1 

Query: 1   MALMVYASAKPFSLPTLVAAQSCFRARKPARVMRSTSSHMAEGSSSKLKEFPHLSTSQRA 60
           MA MVYASAKPFSLP  V  QSCF ARKPA V+RS +SHMAEGSSSKLKEFPHLS S RA
Sbjct: 1   MASMVYASAKPFSLPPPVPVQSCFTARKPATVIRSAASHMAEGSSSKLKEFPHLSGSHRA 60

Query: 61  LMADLINAIEDRFEDRLLPCTLPPDVEYYQNQSGTSEGALLIRSGSPDSSINFILASWLH 120
           LMADLI AIEDR EDRLLPC LPPDVEYY+NQSGTSEGALL+RSGSPDSSINFILASWLH
Sbjct: 61  LMADLIGAIEDRLEDRLLPCALPPDVEYYRNQSGTSEGALLVRSGSPDSSINFILASWLH 120

Query: 121 SQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDPVLNPDYLQS 180
           SQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILD+PPRKDPVLNPDYLQ 
Sbjct: 121 SQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDMPPRKDPVLNPDYLQL 180

Query: 181 FYEDTRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRIDTESGGPERMEEIIKNH 240
           FYEDTRLDTYRKTIEELPETRPYVMSSL+FRSLVSPTSIISR+DTESGGPERMEEIIKNH
Sbjct: 181 FYEDTRLDTYRKTIEELPETRPYVMSSLYFRSLVSPTSIISRVDTESGGPERMEEIIKNH 240

Query: 241 VGPIARDVVRVWVDECACKEREVGMMERVELEKRDKLVKKKTIDIDLGSSLPRLFGQEVA 300
           +GP+ARDV++VW++ECACKEREVGM+ERV+LEKRD+LVKKKTIDIDLGSSLPRLFGQE+A
Sbjct: 241 IGPVARDVLQVWLNECACKEREVGMVERVDLEKRDELVKKKTIDIDLGSSLPRLFGQEIA 300

Query: 301 DRVVAAIQRVFD 313
           DRVVAAIQ+VF+
Sbjct: 301 DRVVAAIQQVFE 312

[Close]
BLAST of MELO3C020912 vs. TrEMBL
Match: D7SVY1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00680 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.5e-94
Identity = 173/310 (55.81%), Postives = 234/310 (75.48%), Query Frame = 1 

Query: 11  PFSLP---TLVAAQSCFRARKPARVMRSTSSHMA------EGSSSKLKEFPHLSTSQRAL 70
           P  LP   +  A+      ++P  +M ++SS  +       G  S+  EFPH+S   R L
Sbjct: 12  PLCLPPPSSRTASHYSVSPKRPPPIMAASSSSPSLTDPQYGGGRSRFMEFPHVSAPHRDL 71

Query: 71  MADLINAIEDRFEDRLLPCTLPPDVEYYQNQSGTSEGALLIRSGSPDSSINFILASWLHS 130
           M +L++A+E R +  LLPCTLPPDV+YY+NQSGT++  L +RSG   S I+F+L SW+H 
Sbjct: 72  MVELVSAVEARLDSYLLPCTLPPDVQYYENQSGTAQATLHVRSGHDSSPIDFVLGSWIHC 131

Query: 131 QLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDPVLNPDYLQSF 190
           QLP+G +LNI SLS YL PSTDAPNFLIE I+SSPTSL+LILDLPPRKD  L+PDYLQ+F
Sbjct: 132 QLPSGGALNITSLSTYLNPSTDAPNFLIELIRSSPTSLVLILDLPPRKDLALHPDYLQTF 191

Query: 191 YEDTRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRIDTESGGPERMEEIIKNHV 250
           YEDT+L++ R+ +E++PE++PY  SSL+ R +VSPT+I++RI+TE+GG ERMEEI+++HV
Sbjct: 192 YEDTKLESRRQLLEKIPESQPYFSSSLYIRCIVSPTAIMTRIETEAGGVERMEEILQSHV 251

Query: 251 GPIARDVVRVWVDECACKEREVGMMERVELEKRDKLVKKKTIDIDLGSSLPRLFGQEVAD 310
           GP+A +V+ +W+D+CA  EREVG  E   LEKRD+L++ KTI+IDLGSSLPRLFG E A 
Sbjct: 252 GPVAMEVLGIWLDQCAFGEREVGDSEISYLEKRDRLIRSKTIEIDLGSSLPRLFGPETAG 311

Query: 311 RVVAAIQRVF 312
           RV+ A++ VF
Sbjct: 312 RVLEAMRGVF 321

[Close]
BLAST of MELO3C020912 vs. TrEMBL
Match: A9PG24_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s11060g PE=2 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 2.8e-90
Identity = 160/266 (60.15%), Postives = 213/266 (80.08%), Query Frame = 1 

Query: 47  KLKEFPHLSTSQRALMADLINAIEDRFEDRLLPCTLPPDVEYYQNQSGTSEGALLIRSGS 106
           K  EFP +S   R LM +L++ +EDR    LLPCTLP DV++ QN+SG+++ +L IRSG 
Sbjct: 10  KFIEFPFVSAPHRDLMVNLLSTVEDRLGSHLLPCTLPLDVQHCQNESGSAQASLHIRSGL 69

Query: 107 PDSSINFILASWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLP 166
             S ++FIL SWLH +LPTG +LNI SLSAYL PSTDAPNF+IE IQSSPTSL+ ILDLP
Sbjct: 70  QSSQVDFILGSWLHCKLPTGGALNITSLSAYLNPSTDAPNFMIELIQSSPTSLVFILDLP 129

Query: 167 PRKDPVLNPDYLQSFYEDTRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRIDTE 226
           PRKDPVL+PDYLQ+FYE+T+LDT+R+ + +LPE +PYV SSL+ RS++SPT ++ +I  +
Sbjct: 130 PRKDPVLSPDYLQTFYENTQLDTHRQMLAKLPEVQPYVSSSLYLRSVLSPTVVMIQIGAQ 189

Query: 227 SGGPERMEEIIKNHVGPIARDVVRVWVDECACKEREVGMMERVELEKRDKLVKKKTIDID 286
           +GGPERMEEI+KNH+ P A++V+ +W+D CA  ER VG  E+  + KRD+L+KKKTI+ID
Sbjct: 190 AGGPERMEEIVKNHIDPTAQEVLGIWLDHCARGERLVGEEEKAYMMKRDELIKKKTIEID 249

Query: 287 LGSSLPRLFGQEVADRVVAAIQRVFD 313
           LG++ PRLFG EV DRV+ AIQ+V++
Sbjct: 250 LGTNFPRLFGPEVTDRVLGAIQKVYN 275

[Close]
BLAST of MELO3C020912 vs. TrEMBL
Match: A0A0L9UUJ9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g010500 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 8.3e-90
Identity = 160/266 (60.15%), Postives = 215/266 (80.83%), Query Frame = 1 

Query: 46  SKLKEFPHLSTSQRALMADLINAIEDRFEDRLLPCTLPPDVEYYQNQSGTSEGALLIRSG 105
           SK  +FP +S +Q+ LM +L++ +EDRF  +LLPCTLPPDV+YYQ+Q+GT++ +L IRS 
Sbjct: 13  SKFIDFPFVSAAQKNLMVELVSKLEDRFHSQLLPCTLPPDVQYYQSQTGTAQASLHIRSA 72

Query: 106 SPDSSINFILASWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDL 165
           + DS ++F+L SW+HS+LPTG SL+I SLSAYL  STDAPNF+ E I+SSPT L+LILDL
Sbjct: 73  TDDSPVDFVLGSWVHSELPTGGSLDITSLSAYLNSSTDAPNFVFEMIRSSPTMLVLILDL 132

Query: 166 PPRKDPVLNPDYLQSFYEDTRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRIDT 225
           PPRKD VL PD L++FYEDT+LDT+R+ +E +PE +PY  SSL+ RS+ SPT+I+ RI T
Sbjct: 133 PPRKDLVLWPDDLKTFYEDTQLDTHRQALERVPEVKPYFSSSLYIRSVSSPTTIMVRIVT 192

Query: 226 ESGGPERMEEIIKNHVGPIARDVVRVWVDECACKEREVGMMERVELEKRDKLVKKKTIDI 285
           E+GG ERMEEII++H+ PI++ V+ +W+D CAC +R+VG  ER  L+KRD L++ KTI+I
Sbjct: 193 ENGGVERMEEIIRDHLDPISKQVLGIWLDHCACAQRDVGEAERAYLKKRDGLIRNKTIEI 252

Query: 286 DLGSSLPRLFGQEVADRVVAAIQRVF 312
           DLGSS PRLFG EVA+RV+ AI+  F
Sbjct: 253 DLGSSFPRLFGPEVANRVLEAIKGYF 278

[Close]
BLAST of MELO3C020912 vs. TAIR10
Match: AT4G37000.1 (AT4G37000.1 accelerated cell death 2 (ACD2))

HSP 1 Score: 288.5 bits (737), Expect = 5.0e-78
Identity = 143/310 (46.13%), Postives = 208/310 (67.10%), Query Frame = 1 

Query: 5   VYASAKPFSLPTLVAAQSCFRARKPARVMRSTSSHMAEGSSSKLKEFPHLSTSQRALMAD 64
           +Y+S+ P  L  L +  S F      R    +     +    K  EFP++S +++ LM D
Sbjct: 9   LYSSSSPSYLSPLTSKPSRFSKNLRPRAQFQSMEDHDDHLRRKFMEFPYVSPTRKQLMVD 68

Query: 65  LINAIEDRFEDRLLPCTLPPDVEYYQNQSGTSEGALLIRSGSPDSSINFILASWLHSQLP 124
           L++ +E+R + +LLPC LPPDV  + N +G++E +L IRSG   S I+F++ SW+H ++P
Sbjct: 69  LMSTVENRLQSQLLPCNLPPDVRNFNNPNGSAEASLHIRSGDKSSPIDFVIGSWIHCKIP 128

Query: 125 TGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDPVLNPDYLQSFYED 184
           TG SLNI S+S +L  ST APNF++E IQSS  SL+LILDLP RKD VLNPDYL+ +Y+D
Sbjct: 129 TGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLPHRKDLVLNPDYLKEYYQD 188

Query: 185 TRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRIDTESGGPERMEEIIKNHVGPI 244
           T LD++R+++ +LPE  PYV  SLF RS  SPT+ + +ID E    +++EEI+++HV P 
Sbjct: 189 TALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAEE--EDKLEEILRDHVSPA 248

Query: 245 ARDVVRVWVDECACKERE---VGMMERVELEKRDKLVKKKTIDIDLGSSLPRLFGQEVAD 304
           A++V+ VW++ C  +E E   VG  ER+ELE+RDK  ++K+I+ DL    PR+FG+EV+ 
Sbjct: 249 AKEVLEVWLERCVKEEEEKIVVGEEERMELERRDKSFRRKSIEDDLDLQFPRMFGEEVSS 308

Query: 305 RVVAAIQRVF 312
           RVV AI+  F
Sbjct: 309 RVVHAIKEAF 316

[Close]
BLAST of MELO3C020912 vs. NCBI nr
Match: gi|659116001|ref|XP_008457849.1| (PREDICTED: red chlorophyll catabolite reductase-like [Cucumis melo])

HSP 1 Score: 615.9 bits (1587), Expect = 3.9e-173
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 1 

Query: 1   MALMVYASAKPFSLPTLVAAQSCFRARKPARVMRSTSSHMAEGSSSKLKEFPHLSTSQRA 60
           MALMVYASAKPFSLPTLVAAQSCFRARKPARVMRSTSSHMAEGSSSKLKEFPHLSTSQRA
Sbjct: 1   MALMVYASAKPFSLPTLVAAQSCFRARKPARVMRSTSSHMAEGSSSKLKEFPHLSTSQRA 60

Query: 61  LMADLINAIEDRFEDRLLPCTLPPDVEYYQNQSGTSEGALLIRSGSPDSSINFILASWLH 120
           LMADLINAIEDRFEDRLLPCTLPPDVEYYQNQSGTSEGALLIRSGSPDSSINFILASWLH
Sbjct: 61  LMADLINAIEDRFEDRLLPCTLPPDVEYYQNQSGTSEGALLIRSGSPDSSINFILASWLH 120

Query: 121 SQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDPVLNPDYLQS 180
           SQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDPVLNPDYLQS
Sbjct: 121 SQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDPVLNPDYLQS 180

Query: 181 FYEDTRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRIDTESGGPERMEEIIKNH 240
           FYEDTRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRIDTESGGPERMEEIIKNH
Sbjct: 181 FYEDTRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRIDTESGGPERMEEIIKNH 240

Query: 241 VGPIARDVVRVWVDECACKEREVGMMERVELEKRDKLVKKKTIDIDLGSSLPRLFGQEVA 300
           VGPIARDVVRVWVDECACKEREVGMMERVELEKRDKLVKKKTIDIDLGSSLPRLFGQEVA
Sbjct: 241 VGPIARDVVRVWVDECACKEREVGMMERVELEKRDKLVKKKTIDIDLGSSLPRLFGQEVA 300

Query: 301 DRVVAAIQRVFDEA 315
           DRVVAAIQRVFDEA
Sbjct: 301 DRVVAAIQRVFDEA 314

[Close]
BLAST of MELO3C020912 vs. NCBI nr
Match: gi|778669988|ref|XP_011649338.1| (PREDICTED: red chlorophyll catabolite reductase [Cucumis sativus])

HSP 1 Score: 583.6 bits (1503), Expect = 2.1e-163
Identity = 295/314 (93.95%), Postives = 305/314 (97.13%), Query Frame = 1 

Query: 1   MALMVYASAKPFSLPTLVAAQSCFRARKPARVMRSTSSHMAEGSSSKLKEFPHLSTSQRA 60
           MALMVYASAKPFSLP LV AQS FRA KPARV+RST+SHMAEGSSSKLK+FPHLS+SQRA
Sbjct: 1   MALMVYASAKPFSLPPLVPAQSSFRATKPARVIRSTASHMAEGSSSKLKDFPHLSSSQRA 60

Query: 61  LMADLINAIEDRFEDRLLPCTLPPDVEYYQNQSGTSEGALLIRSGSPDSSINFILASWLH 120
           LM DLINAIEDRFEDRLLPCTLPPDVEYYQNQSG SEGALLIRSGSPDSSINFILASWLH
Sbjct: 61  LMGDLINAIEDRFEDRLLPCTLPPDVEYYQNQSGNSEGALLIRSGSPDSSINFILASWLH 120

Query: 121 SQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDPVLNPDYLQS 180
           SQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKD VLNPDYLQS
Sbjct: 121 SQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVLNPDYLQS 180

Query: 181 FYEDTRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRIDTESGGPERMEEIIKNH 240
           FYEDTRLDTYRKTIEELPE RPY+MSSLFFRSLVSPTSIISR+DTESGGPERMEEIIKNH
Sbjct: 181 FYEDTRLDTYRKTIEELPEARPYIMSSLFFRSLVSPTSIISRVDTESGGPERMEEIIKNH 240

Query: 241 VGPIARDVVRVWVDECACKEREVGMMERVELEKRDKLVKKKTIDIDLGSSLPRLFGQEVA 300
           VGPIARD+VRVWVDECACKEREVGMMERVE+EKRD L+KKKTIDIDLGSSLPRLFGQEVA
Sbjct: 241 VGPIARDMVRVWVDECACKEREVGMMERVEIEKRDGLIKKKTIDIDLGSSLPRLFGQEVA 300

Query: 301 DRVVAAIQRVFDEA 315
           DRVVAAIQ+VFDEA
Sbjct: 301 DRVVAAIQQVFDEA 314

[Close]
BLAST of MELO3C020912 vs. NCBI nr
Match: gi|270308988|dbj|BAI52947.1| (red chlorophyll catabolite reductase [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 560.5 bits (1443), Expect = 1.9e-156
Identity = 279/312 (89.42%), Postives = 298/312 (95.51%), Query Frame = 1 

Query: 1   MALMVYASAKPFSLPTLVAAQSCFRARKPARVMRSTSSHMAEGSSSKLKEFPHLSTSQRA 60
           MA MVYASAKPFSLP  V  QSCF ARKPA V+RS +SHMAEGSSSKLKEFPHLS S RA
Sbjct: 1   MASMVYASAKPFSLPPPVPVQSCFTARKPATVIRSAASHMAEGSSSKLKEFPHLSGSHRA 60

Query: 61  LMADLINAIEDRFEDRLLPCTLPPDVEYYQNQSGTSEGALLIRSGSPDSSINFILASWLH 120
           LMADLI AIEDR EDRLLPC LPPDVEYY+NQSGTSEGALL+RSGSPDSSINFILASWLH
Sbjct: 61  LMADLIGAIEDRLEDRLLPCALPPDVEYYRNQSGTSEGALLVRSGSPDSSINFILASWLH 120

Query: 121 SQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDPVLNPDYLQS 180
           SQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILD+PPRKDPVLNPDYLQ 
Sbjct: 121 SQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDMPPRKDPVLNPDYLQL 180

Query: 181 FYEDTRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRIDTESGGPERMEEIIKNH 240
           FYEDTRLDTYRKTIEELPETRPYVMSSL+FRSLVSPTSIISR+DTESGGPERMEEIIKNH
Sbjct: 181 FYEDTRLDTYRKTIEELPETRPYVMSSLYFRSLVSPTSIISRVDTESGGPERMEEIIKNH 240

Query: 241 VGPIARDVVRVWVDECACKEREVGMMERVELEKRDKLVKKKTIDIDLGSSLPRLFGQEVA 300
           +GP+ARDV++VW++ECACKEREVGM+ERV+LEKRD+LVKKKTIDIDLGSSLPRLFGQE+A
Sbjct: 241 IGPVARDVLQVWLNECACKEREVGMVERVDLEKRDELVKKKTIDIDLGSSLPRLFGQEIA 300

Query: 301 DRVVAAIQRVFD 313
           DRVVAAIQ+VF+
Sbjct: 301 DRVVAAIQQVFE 312

[Close]
BLAST of MELO3C020912 vs. NCBI nr
Match: gi|225438706|ref|XP_002277744.1| (PREDICTED: red chlorophyll catabolite reductase [Vitis vinifera])

HSP 1 Score: 353.6 bits (906), Expect = 3.6e-94
Identity = 173/310 (55.81%), Postives = 234/310 (75.48%), Query Frame = 1 

Query: 11  PFSLP---TLVAAQSCFRARKPARVMRSTSSHMA------EGSSSKLKEFPHLSTSQRAL 70
           P  LP   +  A+      ++P  +M ++SS  +       G  S+  EFPH+S   R L
Sbjct: 12  PLCLPPPSSRTASHYSVSPKRPPPIMAASSSSPSLTDPQYGGGRSRFMEFPHVSAPHRDL 71

Query: 71  MADLINAIEDRFEDRLLPCTLPPDVEYYQNQSGTSEGALLIRSGSPDSSINFILASWLHS 130
           M +L++A+E R +  LLPCTLPPDV+YY+NQSGT++  L +RSG   S I+F+L SW+H 
Sbjct: 72  MVELVSAVEARLDSYLLPCTLPPDVQYYENQSGTAQATLHVRSGHDSSPIDFVLGSWIHC 131

Query: 131 QLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDPVLNPDYLQSF 190
           QLP+G +LNI SLS YL PSTDAPNFLIE I+SSPTSL+LILDLPPRKD  L+PDYLQ+F
Sbjct: 132 QLPSGGALNITSLSTYLNPSTDAPNFLIELIRSSPTSLVLILDLPPRKDLALHPDYLQTF 191

Query: 191 YEDTRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRIDTESGGPERMEEIIKNHV 250
           YEDT+L++ R+ +E++PE++PY  SSL+ R +VSPT+I++RI+TE+GG ERMEEI+++HV
Sbjct: 192 YEDTKLESRRQLLEKIPESQPYFSSSLYIRCIVSPTAIMTRIETEAGGVERMEEILQSHV 251

Query: 251 GPIARDVVRVWVDECACKEREVGMMERVELEKRDKLVKKKTIDIDLGSSLPRLFGQEVAD 310
           GP+A +V+ +W+D+CA  EREVG  E   LEKRD+L++ KTI+IDLGSSLPRLFG E A 
Sbjct: 252 GPVAMEVLGIWLDQCAFGEREVGDSEISYLEKRDRLIRSKTIEIDLGSSLPRLFGPETAG 311

Query: 311 RVVAAIQRVF 312
           RV+ A++ VF
Sbjct: 312 RVLEAMRGVF 321

[Close]
BLAST of MELO3C020912 vs. NCBI nr
Match: gi|1009145038|ref|XP_015890117.1| (PREDICTED: red chlorophyll catabolite reductase, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 350.5 bits (898), Expect = 3.0e-93
Identity = 178/312 (57.05%), Postives = 233/312 (74.68%), Query Frame = 1 

Query: 2   ALMVYASAKPFSLPTLVAAQSCFRARKPARVMRSTSSHMAEGSSSKLKEFPHLSTSQRAL 61
           +L  ++S+KP+SL T  +     RA + +R   S SS     +SS + EFP++S   R L
Sbjct: 12  SLSSFSSSKPYSL-TSASPSLPLRASRLSRPRISASS-----TSSPIMEFPYVSPPHRDL 71

Query: 62  MADLINAIEDRFEDRLLPCTLPPDVEYYQNQSGTSEGALLIRSGSPDSSINFILASWLHS 121
           M DL++ +E R + +LLP TLPPDV+ +QNQSGT+ G+L IRSG   S I+FIL SWLH 
Sbjct: 72  MVDLLSTVETRLDSQLLPSTLPPDVQSFQNQSGTAHGSLHIRSGHDSSPIDFILGSWLHC 131

Query: 122 QLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDPVLNPDYLQSF 181
           +LPTG +LNI SLS+YL  STDAPNFLIE IQSSPTSLILILDLPPRKD  L+PDYLQ+F
Sbjct: 132 ELPTGGALNITSLSSYLNSSTDAPNFLIELIQSSPTSLILILDLPPRKDLALHPDYLQTF 191

Query: 182 YEDTRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRIDTESGGPERMEEIIKNHV 241
           YEDT+LD  R+T+E +PE +PY  SSL+ RS+VSPT+I  RI+ ++G   R+EEIIK H+
Sbjct: 192 YEDTKLDAPRQTLEIIPEVKPYFSSSLYIRSVVSPTAITVRIEGDAGDSGRLEEIIKQHL 251

Query: 242 GPIARDVVRVWVDECACKEREVGMMERVELEKRDKLVKKKTIDIDLGSSLPRLFGQEVAD 301
            PIA+ V+ +W+D+CA  +R+VG  ER  LE RDKL+K KTI+IDLGS+ PRLFG+E+AD
Sbjct: 252 DPIAKQVLGIWLDQCASGKRQVGESERAGLENRDKLIKSKTIEIDLGSNFPRLFGREIAD 311

Query: 302 RVVAAIQRVFDE 314
           RV+  IQ +F +
Sbjct: 312 RVLGTIQEIFSK 317

The following BLAST results are available for this feature:
BLAST of MELO3C020912 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RCCR_ARATH8.8e-7746.13Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis thaliana GN=R... [more]
RCCR_HORVU3.5e-4945.77Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare GN=rccR PE=1 ... [more]
BLAST of MELO3C020912 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJH4_CUCSA1.5e-16393.95Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285300 PE=4 SV=1[more]
D1MWY7_CITLA1.3e-15689.42Red chlorophyll catabolite reductase OS=Citrullus lanatus subsp. vulgaris GN=Cit... [more]
D7SVY1_VITVI2.5e-9455.81Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00680 PE=4 SV=... [more]
A9PG24_POPTR2.8e-9060.15Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s11060g PE=2 SV=1[more]
A0A0L9UUJ9_PHAAN8.3e-9060.15Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g010500 PE=4 SV=1[more]
BLAST of MELO3C020912 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G37000.15.0e-7846.13 accelerated cell death 2 (ACD2)[more]
BLAST of MELO3C020912 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659116001|ref|XP_008457849.1|3.9e-173100.00PREDICTED: red chlorophyll catabolite reductase-like [Cucumis melo][more]
gi|778669988|ref|XP_011649338.1|2.1e-16393.95PREDICTED: red chlorophyll catabolite reductase [Cucumis sativus][more]
gi|270308988|dbj|BAI52947.1|1.9e-15689.42red chlorophyll catabolite reductase [Citrullus lanatus subsp. vulgaris][more]
gi|225438706|ref|XP_002277744.1|3.6e-9455.81PREDICTED: red chlorophyll catabolite reductase [Vitis vinifera][more]
gi|1009145038|ref|XP_015890117.1|3.0e-9357.05PREDICTED: red chlorophyll catabolite reductase, chloroplastic-like [Ziziphus ju... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009439RCC_reductase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0009814 defense response, incompatible interaction
biological_process GO:0000023 maltose metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0010304 PSII associated light-harvesting complex II catabolic process
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0006364 rRNA processing
biological_process GO:0019252 starch biosynthetic process
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005829 cytosol
cellular_component GO:0005739 mitochondrion
molecular_function GO:0051743 red chlorophyll catabolite reductase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU49804melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020912T1MELO3C020912T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU49804MU49804transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009439Red chlorophyll catabolite reductasePFAMPF06405RCC_reductasecoord: 58..308
score: 4.2E
NoneNo IPR availablePANTHERPTHR34685FAMILY NOT NAMEDcoord: 1..314
score: 2.0E
NoneNo IPR availablePANTHERPTHR34685:SF2RED CHLOROPHYLL CATABOLITE REDUCTASE, CHLOROPLASTICcoord: 1..314
score: 2.0E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C020912Watermelon (97103) v1mewmB108
MELO3C020912Watermelon (97103) v1mewmB120
MELO3C020912Cucurbita pepo (Zucchini)cpemeB259
MELO3C020912Cucurbita pepo (Zucchini)cpemeB660
MELO3C020912Cucurbita pepo (Zucchini)cpemeB663
MELO3C020912Bottle gourd (USVL1VR-Ls)lsimeB046
MELO3C020912Bottle gourd (USVL1VR-Ls)lsimeB054
MELO3C020912Cucumber (Gy14) v2cgybmeB079
MELO3C020912Silver-seed gourdcarmeB0403
MELO3C020912Silver-seed gourdcarmeB1028
MELO3C020912Cucumber (Chinese Long) v3cucmeB102
MELO3C020912Cucumber (Chinese Long) v3cucmeB098
MELO3C020912Watermelon (97103) v2mewmbB095
MELO3C020912Watermelon (97103) v2mewmbB108
MELO3C020912Wax gourdmewgoB129
MELO3C020912Wax gourdmewgoB137
MELO3C020912Cucumber (Gy14) v1cgymeB596
MELO3C020912Cucumber (Gy14) v1cgymeB597
MELO3C020912Cucurbita maxima (Rimu)cmameB492
MELO3C020912Cucurbita maxima (Rimu)cmameB546
MELO3C020912Cucurbita maxima (Rimu)cmameB554
MELO3C020912Cucurbita moschata (Rifu)cmomeB485
MELO3C020912Cucurbita moschata (Rifu)cmomeB535
MELO3C020912Cucurbita moschata (Rifu)cmomeB544
MELO3C020912Cucurbita moschata (Rifu)cmomeB547
MELO3C020912Wild cucumber (PI 183967)cpimeB092
MELO3C020912Wild cucumber (PI 183967)cpimeB098
MELO3C020912Cucumber (Chinese Long) v2cumeB094
MELO3C020912Cucumber (Chinese Long) v2cumeB099
MELO3C020912Watermelon (Charleston Gray)mewcgB093
MELO3C020912Watermelon (Charleston Gray)mewcgB106