WMU72752 (transcribed_cluster) Watermelon (97103) v1

NameWMU72752
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr1 : 32721862 .. 32722304 (+)
Sequence length442
The following sequences are available for this feature:

transcribed_cluster sequence

ACTTCTTCCAAATCTCTCTCTCCCTCATTCTCTTCTTTCTCCTAATTTCCACCTCTTCCGCTAAAACCCTTCCCCACAAAACAAACGACGTATTACTCCGCCGTCACCGGACAACCCTCCACGGCGGCCCACCCACCACCCCACGCCGAGAAGTAGATCATCGACATCAGTATACACAACCAACAAATTACAAAATGGAGATCAAAATTAACAAGAGCAAGAAGAAAAAGAAGGTCCCGGTGGGATTTAAAAGCAATAATAATAATAATAAGGGAAGTAGCTTTCTCTGTAATGCTCCCAAAGGGATTTGTTCCTCCTTCTGGTTCTTCGCCTTGCCATAACGAAAATCCTCAATCATCTTCTCTTACCTTTTACTGCCATCTTGATCGGCCTTGATTAATCTTTATCCGTTTCGGCATTATTCTTCAGTGGGTTTAATTTC
BLAST of WMU72752 vs. TAIR10
Match: AT4G18335.1 (AT4G18335.1 unknown protein)

HSP 1 Score: 62.0 bits (149), Expect = 3.5e-10
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 1

Query: 268 IREVAFSVMLPKGFVPPSGSSPCHNENPQSSSLTFYCHL 327
           +R+  FSVMLPKGFVPPSGSSPCHN+NP S++ T +C L
Sbjct: 123 VRQDTFSVMLPKGFVPPSGSSPCHNQNPNSAT-TLFCDL 160

Query: 328 385
           
Sbjct: 183 160

BLAST of WMU72752 vs. NCBI nr
Match: gi|700194189|gb|KGN49393.1| (hypothetical protein Csa_6G523350 [Cucumis sativus])

HSP 1 Score: 82.8 bits (203), Expect = 5.5e-13
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 1

Query: 280 AFSVMLPKGFVPPSGSSPCHNENPQSSSLTFYCHLDRP 339
           AFS MLPKGFVPPSGSSPCHNE+PQSSSL FYCHLDRP
Sbjct: 121 AFSAMLPKGFVPPSGSSPCHNEDPQSSSLAFYCHLDRP 158

Query: 340 394
           
Sbjct: 181 158

BLAST of WMU72752 vs. NCBI nr
Match: gi|593694780|ref|XP_007147902.1| (hypothetical protein PHAVU_006G164500g [Phaseolus vulgaris])

HSP 1 Score: 65.5 bits (158), Expect = 9.1e-08
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 1

Query: 283 FSVMLPKGFVPPSGSSPCHNENPQSSSLTFYCHL 342
           FSVMLPKGFVPPSGSSPCHN+ P S S +F+CHL
Sbjct: 111 FSVMLPKGFVPPSGSSPCHNDQPNSVSSSFHCHL 144

Query: 343 385
           
Sbjct: 171 144

BLAST of WMU72752 vs. NCBI nr
Match: gi|685258527|ref|XP_009131580.1| (PREDICTED: uncharacterized protein LOC103856231 [Brassica rapa])

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-07
Identity = 28/41 (68.29%), Postives = 33/41 (80.49%), Query Frame = 1

Query: 268 IREVAFSVMLPKGFVPPSGSSPCHNENPQSSSLTFYCHLDR 327
           +R   FSVMLPKGFVPPSGSSPCHN+NP S+S T +C L +
Sbjct: 130 VRPDTFSVMLPKGFVPPSGSSPCHNQNPNSAS-TLFCDLSK 169

Query: 328 387
           
Sbjct: 190 169

Query: 388 391
           
Sbjct: 250 169

BLAST of WMU72752 vs. NCBI nr
Match: gi|923524224|ref|XP_013677691.1| (PREDICTED: uncharacterized protein LOC106382239 [Brassica napus])

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-07
Identity = 28/41 (68.29%), Postives = 33/41 (80.49%), Query Frame = 1

Query: 268 IREVAFSVMLPKGFVPPSGSSPCHNENPQSSSLTFYCHLDR 327
           +R   FSVMLPKGFVPPSGSSPCHN+NP S+S T +C L +
Sbjct: 130 VRPDTFSVMLPKGFVPPSGSSPCHNQNPNSAS-TLFCDLSK 169

Query: 328 387
           
Sbjct: 190 169

Query: 388 391
           
Sbjct: 250 169

BLAST of WMU72752 vs. NCBI nr
Match: gi|727516357|ref|XP_010434552.1| (PREDICTED: uncharacterized protein LOC104718490 [Camelina sativa])

HSP 1 Score: 63.5 bits (153), Expect = 3.4e-07
Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 1

Query: 268 IREVAFSVMLPKGFVPPSGSSPCHNENPQSSSLTFYCHL 327
           IR  AFSVMLPKGFVPPSGSSPCHN+NP S++ T +C L
Sbjct: 128 IRPDAFSVMLPKGFVPPSGSSPCHNQNPNSAT-TLFCDL 165

Query: 328 385
           
Sbjct: 188 165

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT4G18335.13.5e-1069.23 unknown protein[more]
Match NameE-valueIdentityDescription
gi|700194189|gb|KGN49393.1|5.5e-1392.11hypothetical protein Csa_6G523350 [Cucumis sativus][more]
gi|593694780|ref|XP_007147902.1|9.1e-0879.41hypothetical protein PHAVU_006G164500g [Phaseolus vulgaris][more]
gi|685258527|ref|XP_009131580.1|2.0e-0768.29PREDICTED: uncharacterized protein LOC103856231 [Brassica rapa][more]
gi|923524224|ref|XP_013677691.1|2.0e-0768.29PREDICTED: uncharacterized protein LOC106382239 [Brassica napus][more]
gi|727516357|ref|XP_010434552.1|3.4e-0774.36PREDICTED: uncharacterized protein LOC104718490 [Camelina sativa][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla009770Cla009770gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S3_0136096S3_0136096EST