WMU66079 (transcribed_cluster) Watermelon (97103) v1

NameWMU66079
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr6 : 24747831 .. 24748438 (-)
Sequence length398
The following sequences are available for this feature:

transcribed_cluster sequence

CGAGTCAAATTGCTCTCCACATGTTTCACATGAATTGCCAGAATCCTTAGATGTTGCCTTGGATTTCTTTCCTTTAGATGAGTGTCTAGGGTTGATCTTTGTATCATTCTGCACCACTGTTTTCCGATCAGCTGATTTACTTGAAGTCCTTTGTTCTTTAGCCAACTCACTGGTCCCCTTATCACTACTTTCATCCTTATGCAACGAATTGGATGGGGAATCCTGCTGATACGATGAATCGTCTCCATTGTTTTTGTCATTCTGAGAATCTGGTTCATTCATAGCTTCATCATTTCCCTTGCCCTTCTTTTTGGCTCGACGATTCTTTTTTCCCCCTTTACCATTTTCGGAATTCTGCCGGACTAGGCTCATTGTTCTCATTTTCAAAATGAGCTTTG
BLAST of WMU66079 vs. NCBI nr
Match: gi|659106163|ref|XP_008453267.1| (PREDICTED: LOW QUALITY PROTEIN: dnaJ homolog subfamily C member 21 [Cucumis melo])

HSP 1 Score: 120.2 bits (300), Expect = 2.8e-24
Identity = 68/97 (70.10%), Postives = 72/97 (74.23%), Query Frame = -3

Query: 1   DEAMNEPDSQNDKNNGDDSSYQQDSPSNSLHKDESSDKGTSELAKEQRTSSKSADRKTVV 60
           DEAMNE DS+N K NGDDSS+QQDS SNSLH DE+SDKG SELAKEQR SSKSADRK V 
Sbjct: 471 DEAMNETDSRNYKTNGDDSSHQQDSTSNSLHNDETSDKGASELAKEQRASSKSADRKAVT 530

Query: 61  QNDTKINPRHXXXXXXXXXXXXXXGNSCETCGEQFDS 120
           QND KIN RH              GNSCETCGE+FDS
Sbjct: 531 QNDMKINSRHSSKGKKSKATSKDSGNSCETCGEEFDS 567

Query: 121 180
           
Sbjct: 591 567

Query: 181 240
           
Sbjct: 651 567

Query: 241 292
           
Sbjct: 711 567

BLAST of WMU66079 vs. NCBI nr
Match: gi|449441091|ref|XP_004138317.1| (PREDICTED: dnaJ homolog subfamily C member 21 [Cucumis sativus])

HSP 1 Score: 119.0 bits (297), Expect = 6.2e-24
Identity = 67/97 (69.07%), Postives = 72/97 (74.23%), Query Frame = -3

Query: 1   DEAMNEPDSQNDKNNGDDSSYQQDSPSNSLHKDESSDKGTSELAKEQRTSSKSADRKTVV 60
           DEAMNE DS+N K NGDDSS+QQDS SNSLH DE+SDKG SELAKEQR SSKSADRK V 
Sbjct: 473 DEAMNETDSRNYKTNGDDSSHQQDSTSNSLHNDENSDKGASELAKEQRASSKSADRKAVA 532

Query: 61  QNDTKINPRHXXXXXXXXXXXXXXGNSCETCGEQFDS 120
           QND KIN RH              GNSC+TCGE+FDS
Sbjct: 533 QNDLKINSRHSSKGKKSKSTSKDSGNSCDTCGEEFDS 569

Query: 121 180
           
Sbjct: 593 569

Query: 181 240
           
Sbjct: 653 569

Query: 241 292
           
Sbjct: 713 569

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659106163|ref|XP_008453267.1|2.8e-2470.10PREDICTED: LOW QUALITY PROTEIN: dnaJ homolog subfamily C member 21 [Cucumis melo... [more]
gi|449441091|ref|XP_004138317.1|6.2e-2469.07PREDICTED: dnaJ homolog subfamily C member 21 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla019060Cla019060gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0139199S2_0139199EST