CU163942 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU163942
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 6294255 .. 6294476 (-)
Sequence length226
The following sequences are available for this feature:

transcribed_cluster sequence

TCCGGCAAGAAGTTGTGAAAGATGGAATTTCGATCCCTGATGAAATCCTGAACTTCAAGGAATTGAAAGTGAAATTGCTGAAGAAATGTGGTGGACTTCCGTTGATCGCTAAGATGATGGGGAGAGATTCAATTCAAAAAAGACTAGAAAAGAAGAAAAATACAGAACAACAACGACGAGAAGAAGAAGATCGATGATTAAAATTAGCAATCAATTTCTTTATATT
BLAST of CU163942 vs. TrEMBL
Match: A0A0A0KKR5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165310 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.3e-06
Identity = 34/64 (53.12%), Postives = 35/64 (54.69%), Query Frame = 3

Query: 3   RQEVVKDGISIPDEILNFXXXXXXXXXXXXXXXXIAKMMGRDSIQKRLEKKKNTXXXXXX 62
           RQEVVKDGISIPDEILNF                IAKMMG    +K LEKKKNT      
Sbjct: 230 RQEVVKDGISIPDEILNFKELKVKLLKKCGGLPLIAKMMGEIQFKKELEKKKNTEQQRRE 289

Query: 63  XXDR 122
             DR
Sbjct: 290 EEDR 293

Query: 123 182
           
Sbjct: 350 293

Query: 183 195
           
Sbjct: 410 293

BLAST of CU163942 vs. NCBI nr
Match: gi|778700172|ref|XP_004152419.2| (PREDICTED: probable disease resistance protein At4g19060 [Cucumis sativus])

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-06
Identity = 34/64 (53.12%), Postives = 35/64 (54.69%), Query Frame = 3

Query: 3   RQEVVKDGISIPDEILNFXXXXXXXXXXXXXXXXIAKMMGRDSIQKRLEKKKNTXXXXXX 62
           RQEVVKDGISIPDEILNF                IAKMMG    +K LEKKKNT      
Sbjct: 230 RQEVVKDGISIPDEILNFKELKVKLLKKCGGLPLIAKMMGEIQFKKELEKKKNTEQQRRE 289

Query: 63  XXDR 122
             DR
Sbjct: 290 EEDR 293

Query: 123 182
           
Sbjct: 350 293

Query: 183 195
           
Sbjct: 410 293

BLAST of CU163942 vs. NCBI nr
Match: gi|659073389|ref|XP_008437034.1| (PREDICTED: probable disease resistance protein At4g19060 [Cucumis melo])

HSP 1 Score: 58.5 bits (140), Expect = 5.6e-06
Identity = 31/54 (57.41%), Postives = 33/54 (61.11%), Query Frame = 3

Query: 3   RQEVVKDGISIPDEILNFXXXXXXXXXXXXXXXXIAKMMGRDSIQKRLEKKKNT 62
           RQEVVKDG+SIPDEILNF                IAKMMG    +K LEKKKNT
Sbjct: 230 RQEVVKDGVSIPDEILNFKELKVKLLKKCGGLPLIAKMMGEIQFKKELEKKKNT 283

Query: 63  122
           
Sbjct: 290 283

Query: 123 165
           
Sbjct: 350 283

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KKR5_CUCSA1.3e-0653.13Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165310 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778700172|ref|XP_004152419.2|1.9e-0653.13PREDICTED: probable disease resistance protein At4g19060 [Cucumis sativus][more]
gi|659073389|ref|XP_008437034.1|5.6e-0657.41PREDICTED: probable disease resistance protein At4g19060 [Cucumis melo][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa5G165310Csa5G165310gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0077410H0077410EST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 45..65
scor