CU117605 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU117605
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 27427663 .. 27427923 (-)
Sequence length260
The following sequences are available for this feature:

transcribed_cluster sequence

TTCCATATAAAAGGTGCTCAACTGAAAGGCTTGAAGCAGTACAAGTTGAAGCAGCAGTTGATGGTTGATTCTTCACAGAGTTATTTCGACGGAATGAGATAGTATACCAATGTGCATTTATCAAGTTTAAATGAGGTTCCACAATTTGTTGGTTATAATATTCATAAAGCTCATCACCACTCTCCTCTATGCAATTCATAATTGTGTGAATAAGTCCCTCAACATTTTGCTGGTAAACTAAACGAGCTCCACAAAACTCT
Library categoryESTs
fruit (8DPP) library2
BLAST of CU117605 vs. TrEMBL
Match: A0A0A0KW19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G647540 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.1e-33
Identity = 72/86 (83.72%), Postives = 72/86 (83.72%), Query Frame = -2

Query: 2   EFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVEPHLNLINAHWYTISFRRNN 61
           EFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVE HLNLINAHWYTISFRRNN
Sbjct: 4   EFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVESHLNLINAHWYTISFRRNN 63

Query: 62  SVKNQPXXXXXXXXXXXXXVEHLLYG 121
           SVKNQP             VEHLLYG
Sbjct: 64  SVKNQPSTAASTCTASSLSVEHLLYG 89

Query: 122 181
           
Sbjct: 124 89

Query: 182 241
           
Sbjct: 184 89

Query: 242 260
           
Sbjct: 244 89

BLAST of CU117605 vs. NCBI nr
Match: gi|700197455|gb|KGN52632.1| (hypothetical protein Csa_5G647540 [Cucumis sativus])

HSP 1 Score: 151.8 bits (382), Expect = 5.6e-34
Identity = 72/86 (83.72%), Postives = 72/86 (83.72%), Query Frame = -2

Query: 2   EFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVEPHLNLINAHWYTISFRRNN 61
           EFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVE HLNLINAHWYTISFRRNN
Sbjct: 4   EFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVESHLNLINAHWYTISFRRNN 63

Query: 62  SVKNQPXXXXXXXXXXXXXVEHLLYG 121
           SVKNQP             VEHLLYG
Sbjct: 64  SVKNQPSTAASTCTASSLSVEHLLYG 89

Query: 122 181
           
Sbjct: 124 89

Query: 182 241
           
Sbjct: 184 89

Query: 242 260
           
Sbjct: 244 89

BLAST of CU117605 vs. NCBI nr
Match: gi|659119228|ref|XP_008459543.1| (PREDICTED: TMV resistance protein N-like [Cucumis melo])

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-29
Identity = 63/86 (73.26%), Postives = 67/86 (77.91%), Query Frame = -2

Query: 2    EFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVEPHLNLINAHWYTISFRRNN 61
            EFCGARLVYQQNVEGL+HTI+NCI ESGDELYE+YNQ IVE HL  IN HWYT+SFRRNN
Sbjct: 1353 EFCGARLVYQQNVEGLVHTILNCIAESGDELYEHYNQYIVESHLTFINTHWYTLSFRRNN 1412

Query: 62   SVKNQPXXXXXXXXXXXXXVEHLLYG 121
            SVKNQP             VEHLLYG
Sbjct: 1413 SVKNQPSTAASTCTASSLSVEHLLYG 1438

Query: 122  181
            
Sbjct: 1473 1438

Query: 182  241
            
Sbjct: 1533 1438

Query: 242  260
            
Sbjct: 1593 1438

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KW19_CUCSA1.1e-3383.72Uncharacterized protein OS=Cucumis sativus GN=Csa_5G647540 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700197455|gb|KGN52632.1|5.6e-3483.72hypothetical protein Csa_5G647540 [Cucumis sativus][more]
gi|659119228|ref|XP_008459543.1|1.1e-2973.26PREDICTED: TMV resistance protein N-like [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa5G647540Csa5G647540gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02M1MQDFKNP3UI02M1MQDEST
FKNP3UI02NO8ZPFKNP3UI02NO8ZPEST