CU085233 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU085233
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 18685621 .. 18685970 (+)
Sequence length375
The following sequences are available for this feature:

transcribed_cluster sequence

AGTTATTAGTAAATGTTGGGCATTGATGTTTGAACTTTTCTTTGAAGTGGAGAAAGGACAAAGGAATCGCTACCACATGCATGGCTGACATTAGCATGGTTTTTTTCAAGAACGATAGTAACTATATAATATAAAAGACAGAAATTGAAATTAGCATTGAGGAGAAGCCAAAAAGGCATAATTATTACAATAAGAACCTCAACGAATGGTTACTTTGTGATTTCATTTTCTACTACAGCAGCCTCCATTCGGTTGGCCATCGACCTCAATCCCACTTCATACTTCTTCACCAAATCCTCCAGCTTCAAGCCTTCCACTGCCTCAACCTCAAACCTCCACTCAATCATGCACCCACCCCCGACCTAAATAGGACCA
BLAST of CU085233 vs. TrEMBL
Match: A0A0A0LPR8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373500 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = -2

Query: 213 GGGCMIEWRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAVVENEITK 272
           GGGCMIEWRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAVVENEITK
Sbjct: 130 GGGCMIEWRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAVVENEITK 178

Query: 273 332
           
Sbjct: 190 178

Query: 333 360
           
Sbjct: 250 178

BLAST of CU085233 vs. TrEMBL
Match: A0A166FHD6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_008621 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.5e-06
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = -2

Query: 234 GGGCMIEWRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAV 293
           G GCMIEW F V+ V GL +EDLV KY++GL SMA +ME A+
Sbjct: 113 GDGCMIEWSFVVDPVNGLNVEDLVTKYKLGLESMAKKMEEAL 154

Query: 294 353
           
Sbjct: 173 154

Query: 354 360
           
Sbjct: 233 154

BLAST of CU085233 vs. NCBI nr
Match: gi|449461385|ref|XP_004148422.1| (PREDICTED: lachrymatory-factor synthase [Cucumis sativus])

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = -2

Query: 213 GGGCMIEWRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAVVENEITK 272
           GGGCMIEWRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAVVENEITK
Sbjct: 130 GGGCMIEWRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAVVENEITK 178

Query: 273 332
           
Sbjct: 190 178

Query: 333 360
           
Sbjct: 250 178

BLAST of CU085233 vs. NCBI nr
Match: gi|659088483|ref|XP_008445005.1| (PREDICTED: uncharacterized protein LOC103488175 [Cucumis melo])

HSP 1 Score: 89.7 bits (221), Expect = 3.8e-15
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = -2

Query: 228 GGGCMIEWRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAVVE 287
           GGGC+IEWRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAVVE
Sbjct: 136 GGGCVIEWRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAVVE 179

Query: 288 347
           
Sbjct: 196 179

Query: 348 360
           
Sbjct: 256 179

BLAST of CU085233 vs. NCBI nr
Match: gi|719979590|ref|XP_010249529.1| (PREDICTED: lachrymatory-factor synthase-like [Nelumbo nucifera])

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-06
Identity = 25/44 (56.82%), Postives = 35/44 (79.55%), Query Frame = -2

Query: 225 GGCMIEWRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAVVEN 284
           GGC IEW F V+ V+G KLEDL+ KY+ GL++MAN+ME +++ N
Sbjct: 128 GGCKIEWYFAVDPVQGWKLEDLISKYQTGLQNMANKMEESLMNN 171

Query: 285 344
           
Sbjct: 188 171

Query: 345 357
           
Sbjct: 248 171

BLAST of CU085233 vs. NCBI nr
Match: gi|502122436|ref|XP_004497745.1| (PREDICTED: lachrymatory-factor synthase-like [Cicer arietinum])

HSP 1 Score: 59.3 bits (142), Expect = 5.5e-06
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = -2

Query: 234 GGCMIEWRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAV 293
           GGCMIEW F V+ VEGL LEDLV KY +GL+ MA++ME  +
Sbjct: 118 GGCMIEWFFAVDPVEGLVLEDLVSKYRIGLQLMAHKMEEEI 158

Query: 294 353
           
Sbjct: 178 158

Query: 354 357
           
Sbjct: 238 158

BLAST of CU085233 vs. NCBI nr
Match: gi|1021050004|gb|KZN07784.1| (hypothetical protein DCAR_008621 [Daucus carota subsp. sativus])

HSP 1 Score: 58.9 bits (141), Expect = 7.2e-06
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = -2

Query: 234 GGGCMIEWRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAV 293
           G GCMIEW F V+ V GL +EDLV KY++GL SMA +ME A+
Sbjct: 113 GDGCMIEWSFVVDPVNGLNVEDLVTKYKLGLESMAKKMEEAL 154

Query: 294 353
           
Sbjct: 173 154

Query: 354 360
           
Sbjct: 233 154

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LPR8_CUCSA1.5e-18100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373500 PE=4 SV=1[more]
A0A166FHD6_DAUCA8.5e-0661.90Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_008621 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449461385|ref|XP_004148422.1|1.3e-18100.00PREDICTED: lachrymatory-factor synthase [Cucumis sativus][more]
gi|659088483|ref|XP_008445005.1|3.8e-1597.73PREDICTED: uncharacterized protein LOC103488175 [Cucumis melo][more]
gi|719979590|ref|XP_010249529.1|1.1e-0656.82PREDICTED: lachrymatory-factor synthase-like [Nelumbo nucifera][more]
gi|502122436|ref|XP_004497745.1|5.5e-0663.41PREDICTED: lachrymatory-factor synthase-like [Cicer arietinum][more]
gi|1021050004|gb|KZN07784.1|7.2e-0661.90hypothetical protein DCAR_008621 [Daucus carota subsp. sativus][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G373500Csa2G373500gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0038515G0038515EST
G0044814G0044814EST
G0062019G0062019EST
G0089904G0089904EST
G0091295G0091295EST
G0108163G0108163EST
G0190727G0190727EST
H0054683H0054683EST
H0065212H0065212EST
H0088532H0088532EST
H0151114H0151114EST
H0157506H0157506EST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domainGENE3DG3DSA:3.30.530.20coord: 6..47
score: 4.