MELO3C030406.2.1 (mRNA) Melon (DHL92) v3.6.1

Overview
NameMELO3C030406.2.1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionCytochrome P450
Locationchr04 : 5935255 .. 5936064 (+)
Sequence length554
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGTTGTTGATTTGGGATAACTATCCTGCAGTTATGGTAGCCTTTTTGTTTTGAAATTGTTTGTATTTCTGAGGGTTATGTAAGGTAGCGTTGTTAGAAGGGGTGAGTAAAATGCAAAGATTGAAGTTGTTTGTGGTTAATTAAGTTATGGTGACTATCCTGTAGTTATAGTAGCCTTTATAGTTTGAAGTTAGTTTTAGTGAAAATTTTGGGGGATTGTATATTCAGGGAAGTATGTTTAGGATGTGAGAGGAGAGAAATATGTTTCTGATCAAACCTATATATGTTTTATGGACTTAAATGATGGATAAGAATTGGATGAAACTTAGGAATAAGTTTTACCTTGAGTGTAGAGAGGGAGTGACCCAATTTTTAGAAGTTGCCAAGTTTCACGTTGATGCCTATAGACGAATAAGTTGTCCATGCAAGAGATGTATGAACTCAAATTGGAACTCATTAGAGGGTGTGGAACGACATTTTACTGACTGTTGGAATATCCCCTACTACAGAGAATGAGTGTATCATGGAGAGTCAATTAGCTTTAGAGGTACAAAAAACTTTGATGAATGAACTAGTAGTAGGCAGTTTGATGAAAAAATATGTTTGGTATGCTGAATGATTTACAAGCCCCGATTGAACAGGAAGAGGAAACATAGGAAGGTTGTTTGAAGGATGAAATGTCAAGGAATATTGGGGTAGATATAGATGAATATACAATAAACATATTTTAGGACTTATTGAATGAAGCACGTAATGAGTTGTACCTTGGTTGTTCTGAATTTTCCTTTTTGAATTTTTTGGTTAAGTTGA

mRNA sequence

TTGTTGTTGATTTGGGATAACTATCCTGCAGTTATGGGACTTAAATGATGGATAAGAATTGGATGAAACTTAGGAATAAGTTTTACCTTGAGTGTAGAGAGGGAGTGACCCAATTTTTAGAAGTTGCCAAGTTTCACGTTGATGCCTATAGACGAATAAGTTGTCCATGCAAGAGATGTATGAACTCAAATTGGAACTCATTAGAGGGTGTGGAACGACATTTTACTGACTGTTGGAATATCCCCTACTACAGAGAATGAGTGTATCATGGAGAGTCAATTAGCTTTAGAGGTACAAAAAACTTTGATGAATGAACTAGTAGTAGGCAGTTTGATGAAAAAATATGTTTGGTATGCTGAATGATTTACAAGCCCCGATTGAACAGGAAGAGGAAACATAGGAAGGTTGTTTGAAGGATGAAATGTCAAGGAATATTGGGGTAGATATAGATGAATATACAATAAACATATTTTAGGACTTATTGAATGAAGCACGTAATGAGTTGTACCTTGGTTGTTCTGAATTTTCCTTTTTGAATTTTTTGGTTAAGTTGA

Coding sequence (CDS)

ATGATGGATAAGAATTGGATGAAACTTAGGAATAAGTTTTACCTTGAGTGTAGAGAGGGAGTGACCCAATTTTTAGAAGTTGCCAAGTTTCACGTTGATGCCTATAGACGAATAAGTTGTCCATGCAAGAGATGTATGAACTCAAATTGGAACTCATTAGAGGGTGTGGAACGACATTTTACTGACTGTTGGAATATCCCCTACTACAGAGAATGA

Protein sequence

MMDKNWMKLRNKFYLECREGVTQFLEVAKFHVDAYRRISCPCKRCMNSNWNSLEGVERHFTDCWNIPYYRE
Homology
[Close]
BLAST of MELO3C030406.2.1 vs. NCBI nr
Match: XP_008460612.1 (PREDICTED: uncharacterized protein LOC103499390 [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-06
Identity = 25/69 (36.23%), Postives = 39/69 (56.52%), Query Frame = 0 

Query: 2  MDKNWMKLRNKFYLECREGVTQFLEVAKFHVDAYRRISCPCKRCMNSNWNSLEGVERHFT 61
          MD++W+ L+++   E  +GV  F+E+A  H+D      CPC   +N NWN L+ +ERH  
Sbjct: 1  MDRSWINLKDQASSEYFDGVANFIEIATNHLDEEEITRCPCSNFLNVNWNRLDVIERHLY 60

Query: 62 DCWNIPYYR 71
               P Y+
Sbjct: 61 KYGMSPTYK 69

[Close]
BLAST of MELO3C030406.2.1 vs. NCBI nr
Match: XP_003631174.1 (PREDICTED: uncharacterized protein LOC100852986 [Vitis vinifera])

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-06
Identity = 24/58 (41.38%), Postives = 36/58 (62.07%), Query Frame = 0 

Query: 2  MDKNWMKLRNKFYLECREGVTQFLEVAKFHVDAYRRISCPCKRCMNSNWNSLEGVERH 60
          MDK+WM LR++   E   G+  F++VAK HV+   +  CPC+ C N+ W S+  +E H
Sbjct: 1  MDKSWMNLRDRLCKEYVNGIRTFIQVAKNHVNKDGKSRCPCRDCQNAFWKSINDIEIH 58

[Close]
BLAST of MELO3C030406.2.1 vs. NCBI nr
Match: XP_009346388.1 (PREDICTED: uncharacterized protein LOC103938111 [Pyrus x bretschneideri])

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-06
Identity = 27/56 (48.21%), Postives = 37/56 (66.07%), Query Frame = 0 

Query: 1  MMDKNWMKLRNKFYLECREGVTQFLEVAKFHVDAYRRISCPCKRCMNSNWNSLEGV 57
          +MD+ W+  RN   LE REGV  F+ VA+ HV+   +ISCPCK C N  ++S+E V
Sbjct: 43 IMDRQWICNRNLLSLEYREGVKSFINVARHHVNQNNQISCPCKVCHNRFFHSVEDV 98

[Close]
BLAST of MELO3C030406.2.1 vs. NCBI nr
Match: XP_021635728.1 (uncharacterized protein LOC110631975 [Hevea brasiliensis])

HSP 1 Score: 59.3 bits (142), Expect = 6.1e-06
Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 0 

Query: 2  MDKNWMKLRNKFYLECREGVTQFLEVAKFHVDAYRRISCPCKRCMN 48
          MD++WM  +NKF  E  +GV  FL+VAK HVD+  RI CPCK C N
Sbjct: 1  MDRSWMLNKNKFSSEYIQGVRSFLDVAKQHVDSSGRIRCPCKNCNN 46

[Close]
BLAST of MELO3C030406.2.1 vs. NCBI nr
Match: XP_024162762.1 (uncharacterized protein LOC112169901 [Rosa chinensis] >XP_024162763.1 uncharacterized protein LOC112169901 [Rosa chinensis] >XP_024162764.1 uncharacterized protein LOC112169901 [Rosa chinensis])

HSP 1 Score: 59.3 bits (142), Expect = 6.1e-06
Identity = 24/58 (41.38%), Postives = 32/58 (55.17%), Query Frame = 0 

Query: 2  MDKNWMKLRNKFYLECREGVTQFLEVAKFHVDAYRRISCPCKRCMNSNWNSLEGVERH 60
          MD+ W+  ++KF  E +EGV  F+EVAK HV+      CPC  C+N  W  L     H
Sbjct: 1  MDREWILKQDKFSEEYKEGVRSFMEVAKHHVNERNETICPCMECLNKRWQPLHVAHVH 58

[Close]
BLAST of MELO3C030406.2.1 vs. TrEMBL
Match: tr|A0A1S3CDA6|A0A1S3CDA6_CUCME (uncharacterized protein LOC103499390 OS=Cucumis melo OX=3656 GN=LOC103499390 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.1e-07
Identity = 25/69 (36.23%), Postives = 39/69 (56.52%), Query Frame = 0 

Query: 2  MDKNWMKLRNKFYLECREGVTQFLEVAKFHVDAYRRISCPCKRCMNSNWNSLEGVERHFT 61
          MD++W+ L+++   E  +GV  F+E+A  H+D      CPC   +N NWN L+ +ERH  
Sbjct: 1  MDRSWINLKDQASSEYFDGVANFIEIATNHLDEEEITRCPCSNFLNVNWNRLDVIERHLY 60

Query: 62 DCWNIPYYR 71
               P Y+
Sbjct: 61 KYGMSPTYK 69

[Close]
BLAST of MELO3C030406.2.1 vs. TrEMBL
Match: tr|A0A2N9FFB4|A0A2N9FFB4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13602 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.3e-06
Identity = 23/56 (41.07%), Postives = 36/56 (64.29%), Query Frame = 0 

Query: 2  MDKNWMKLRNKFYLECREGVTQFLEVAKFHVDAYRRISCPCKRCMNSNWNSLEGVE 58
          MDK+WM+  N+F     EGV +F+ +A+ HVD   RI CPC+ C+N  +  ++ V+
Sbjct: 1  MDKSWMQESNRFGNRYIEGVNEFISMARSHVDGLDRIKCPCRSCLNRYYKPIDKVQ 56

[Close]
BLAST of MELO3C030406.2.1 vs. TrEMBL
Match: tr|A0A2N9G2W8|A0A2N9G2W8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21296 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.3e-06
Identity = 23/56 (41.07%), Postives = 36/56 (64.29%), Query Frame = 0 

Query: 2  MDKNWMKLRNKFYLECREGVTQFLEVAKFHVDAYRRISCPCKRCMNSNWNSLEGVE 58
          MDK+WM+  N+F     EGV +F+ +A+ HVD   RI CPC+ C+N  +  ++ V+
Sbjct: 1  MDKSWMQESNRFGNRYIEGVNEFISMARSHVDGLDRIKCPCRSCLNRYYKPIDKVQ 56

[Close]
BLAST of MELO3C030406.2.1 vs. TrEMBL
Match: tr|A0A2N9G377|A0A2N9G377_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21681 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.3e-06
Identity = 23/56 (41.07%), Postives = 36/56 (64.29%), Query Frame = 0 

Query: 2  MDKNWMKLRNKFYLECREGVTQFLEVAKFHVDAYRRISCPCKRCMNSNWNSLEGVE 58
          MDK+WM+  N+F     EGV +F+ +A+ HVD   RI CPC+ C+N  +  ++ V+
Sbjct: 1  MDKSWMQESNRFGNRYIEGVNEFISMARSHVDGLDRIKCPCRSCLNRYYKPIDKVQ 56

[Close]
BLAST of MELO3C030406.2.1 vs. TrEMBL
Match: tr|A5AGY3|A5AGY3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_032667 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-05
Identity = 24/58 (41.38%), Postives = 36/58 (62.07%), Query Frame = 0 

Query: 2  MDKNWMKLRNKFYLECREGVTQFLEVAKFHVDAYRRISCPCKRCMNSNWNSLEGVERH 60
          MD++WM L N+   +  EGV  F++VAK H+    +  CPC+ C N+ +N L  +ERH
Sbjct: 1  MDRDWMWLPNRLSRDYVEGVKSFIQVAKEHLRWDNKTRCPCRDCQNARFNDLLTIERH 58

The following BLAST results are available for this feature:
BLAST of MELO3C030406.2.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008460612.11.2e-0636.23PREDICTED: uncharacterized protein LOC103499390 [Cucumis melo][more]
XP_003631174.12.1e-0641.38PREDICTED: uncharacterized protein LOC100852986 [Vitis vinifera][more]
XP_009346388.12.7e-0648.21PREDICTED: uncharacterized protein LOC103938111 [Pyrus x bretschneideri][more]
XP_021635728.16.1e-0656.52uncharacterized protein LOC110631975 [Hevea brasiliensis][more]
XP_024162762.16.1e-0641.38uncharacterized protein LOC112169901 [Rosa chinensis] >XP_024162763.1 uncharacte... [more]
BLAST of MELO3C030406.2.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C030406.2.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C030406.2.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CDA6|A0A1S3CDA6_CUCME8.1e-0736.23uncharacterized protein LOC103499390 OS=Cucumis melo OX=3656 GN=LOC103499390 PE=... [more]
tr|A0A2N9FFB4|A0A2N9FFB4_FAGSY5.3e-0641.07Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13602 PE=4 SV=1[more]
tr|A0A2N9G2W8|A0A2N9G2W8_FAGSY5.3e-0641.07Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21296 PE=4 SV=1[more]
tr|A0A2N9G377|A0A2N9G377_FAGSY5.3e-0641.07Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21681 PE=4 SV=1[more]
tr|A5AGY3|A5AGY3_VITVI1.2e-0541.38Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_032667 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR029480Transpos_assoc
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C030406.2MELO3C030406.2gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C030406.2.1MELO3C030406.2.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C030406.2.1.exon.1MELO3C030406.2.1.exon.1exon
MELO3C030406.2.1.exon.2MELO3C030406.2.1.exon.2exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C030406.2.1.five_prime_UTR.1MELO3C030406.2.1.five_prime_UTR.1five_prime_UTR
MELO3C030406.2.1.five_prime_UTR.2MELO3C030406.2.1.five_prime_UTR.2five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C030406.2.1.CDS.1MELO3C030406.2.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C030406.2.1.three_prime_UTR.1MELO3C030406.2.1.three_prime_UTR.1three_prime_UTR


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029480Transposase-associated domainPFAMPF13963Transpos_assoccoord: 4..60
e-value: 3.2E-11
score: 43.4