MELO3C030170.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C030170.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like
Location	chr03 : 14891757 .. 14893179 (+)
Sequence length	987

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTTTGACAAACCACGCTATGTTCCTCAAGTTTAAGGACGATTTAGATAACATCGAGGGAGGGTCATTGTCTGTTGGTGATAATACGAGTGAGTCTAAGATTTTCTTCATTTTAACTTACGATTATTTCATGTTTTTTCTAACATTATATGTTATTATCGATTTATTGAGCAGGGTCTTCTTCTCAGCAACCTGCGACCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTAGAGTGCCATGTTGCAATAAATGGGTGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTTCCCACACGACATTTGTTTCAGCCAGGCGATAGGCGTGTGCGTGCGGAAGATATTTCCCCGTCCGCTGCCTTAAGTGGGCGGATGTTGGGAGATAATACATTGAGATCGTCAAGGACGACCTCCAGGTAATTAAGTACACTACACATTTATGATTTCATTTGAAACATATCTAACTTTAACCAATCTAATGTGTTATGTTTGTAATGTGTAGCGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTATTGAGCATCAGATGCTCACGACCTTTAAAGAGTTTCGGGTCGACTATCACAGACATTTCAAAAAGTACAGCGACCCGGAGAAGGCTCGTAACAACCCACCTAACGCATTGGTTGGACGTCATGAGGATTGGTACTTTCTCTGCGACCACTATATGAGTCATGCATTCCAGGTATTTGTCATGATTAATTATGATAGCAAGTTTTAATCTGTATAAGAAATAAACAATATAATTGCTTTCATGCAGGAGCAATCATCGACGAACAAGGCTGCTAGACAAAAGCAGCCTTACAATCATAGTAGCTGGTCCAAGTCGTTTCTACAACGACAGTACAAGCTCGCTGAGAGAAAAGGGGAGCCGGTCGATCGTGTGGAGTTGTTCCGGGAAACATACGTTTGAGCTAGGACGTTCGTGTTGCAGGCCGCAGAGGATGCGCATGTAAGTTATGCCCTTATTAACTATTCTCTTTCATTATATATTTTTGCGCATTACCTAACATAGTTTTTACACTTGTTGAAGAATCAAATGTTGGAACTCCAATCCCAGCCTACCCCAGAGGGTAGTCAGCCACTCTCTGAGGATGAGATATGCGATCAGGTGTTGGATAGACGACCAGACTACTCAAAAGGTCTTTGTTGGGGACTTAAGCTAAAGGCCTGCAGGACGGCGAGTGCGAGCAGTTCGTCGACATCTTGTTCGCAGTCCACACAAAAAGATATTGAAACTTAATGAAGCTTTAGAACGGATTGAAGTGCAAGATAGAAATCACCAAGCGTTAGCTTCACAAGTGGAACGAATGCAAAAGCTGATAGAAGAATTCACTCTTGCACAACAGGGACCACCACATGGTCCCTAG

mRNA sequence

ATGTGTTTGACAAACCACGCTATGTTCCTCAAGTTTAAGGACGATTTAGATAACATCGAGGGAGGGTCATTGTCTGTTGGTGATAATACGAGTGAGTCTAAGATTTTCTTCATTTTAACTTACGATTATTTCATGGTCTTCTTCTCAGCAACCTGCGACCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTAGAGTGCCATGTTGCAATAAATGGGTGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTTCCCACACGACATTTGTTTCAGCCAGGCGATAGGCCGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTATTGAGCATCAGATGCTCACGACCTTTAAAGAGTTTCGGGTCGACTATCACAGACATTTCAAAAAGTACAGCGACCCGGAGAAGGCTCGTAACAACCCACCTAACGCATTGGTTGGACGTCATGAGGATTGGTACTTTCTCTGCGACCACTATATGAGTCATGCATTCCAGGAGCAATCATCGACGAACAAGGCTGCTAGACAAAAGCAGCCTTACAATCATAGTAGCTGGTCCAAGTCGTTTCTACAACGACAGTACAAGCTCGCTGAGAGAAAAGGGGAGCCGGTCGATCGTGTGGAGTTGTTCCGGGAAACATACGCCGCAGAGGATGCGCATAATCAAATGTTGGAACTCCAATCCCAGCCTACCCCAGAGGGTAGTCAGCCACTCTCTGAGGATGAGATATGCGATCAGGTGTTGGATAGACGACCAGACTACTCAAAAGGACGGCGAGTGCGAGCAGTTCGTCGACATCTTGTTCGCAGTCCACACAAAAAGATATTGAAACTTAATGAAGCTTTAGAACGGATTGAAGTGCAAGATAGAAATCACCAAGCGTTAGCTTCACAAGTGGAACGAATGCAAAAGCTGATAGAAGAATTCACTCTTGCACAACAGGGACCACCACATGGTCCCTAG

Coding sequence (CDS)

ATGTGTTTGACAAACCACGCTATGTTCCTCAAGTTTAAGGACGATTTAGATAACATCGAGGGAGGGTCATTGTCTGTTGGTGATAATACGAGTGAGTCTAAGATTTTCTTCATTTTAACTTACGATTATTTCATGGTCTTCTTCTCAGCAACCTGCGACCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTAGAGTGCCATGTTGCAATAAATGGGTGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTTCCCACACGACATTTGTTTCAGCCAGGCGATAGGCCGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTATTGAGCATCAGATGCTCACGACCTTTAAAGAGTTTCGGGTCGACTATCACAGACATTTCAAAAAGTACAGCGACCCGGAGAAGGCTCGTAACAACCCACCTAACGCATTGGTTGGACGTCATGAGGATTGGTACTTTCTCTGCGACCACTATATGAGTCATGCATTCCAGGAGCAATCATCGACGAACAAGGCTGCTAGACAAAAGCAGCCTTACAATCATAGTAGCTGGTCCAAGTCGTTTCTACAACGACAGTACAAGCTCGCTGAGAGAAAAGGGGAGCCGGTCGATCGTGTGGAGTTGTTCCGGGAAACATACGCCGCAGAGGATGCGCATAATCAAATGTTGGAACTCCAATCCCAGCCTACCCCAGAGGGTAGTCAGCCACTCTCTGAGGATGAGATATGCGATCAGGTGTTGGATAGACGACCAGACTACTCAAAAGGACGGCGAGTGCGAGCAGTTCGTCGACATCTTGTTCGCAGTCCACACAAAAAGATATTGAAACTTAATGAAGCTTTAGAACGGATTGAAGTGCAAGATAGAAATCACCAAGCGTTAGCTTCACAAGTGGAACGAATGCAAAAGCTGATAGAAGAATTCACTCTTGCACAACAGGGACCACCACATGGTCCCTAG

Protein sequence

MCLTNHAMFLKFKDDLDNIEGGSLSVGDNTSESKIFFILTYDYFMVFFSATCDPTPRRRAQSRLLELECHVAINGCIPMTIAPGAEKPIFPHDICFSQAIGRLFVLDFNDQAMNRFIEHQMLTTFKEFRVDYHRHFKKYSDPEKARNNPPNALVGRHEDWYFLCDHYMSHAFQEQSSTNKAARQKQPYNHSSWSKSFLQRQYKLAERKGEPVDRVELFRETYAAEDAHNQMLELQSQPTPEGSQPLSEDEICDQVLDRRPDYSKGRRVRAVRRHLVRSPHKKILKLNEALERIEVQDRNHQALASQVERMQKLIEEFTLAQQGPPHGP

Homology

[Close]

BLAST of MELO3C030170.2.1 vs. NCBI nr
Match: ADN34071.1 (CACTA en-spm transposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 361.7 bits (927), Expect = 2.7e-96
Identity = 196/285 (68.77%), Postives = 208/285 (72.98%), Query Frame = 0


Query: 8   MFLKFKDDLDNIEGGSLSVGDNTSESKIFFILTYDYFMVFFSATCDPTPRRRAQSRLLEL 67
           MFL+F+DDLDNI GGS SVGDNT  S               S    PTPRRRAQSRLLEL
Sbjct: 6   MFLQFEDDLDNIAGGSSSVGDNTESS---------------SQQATPTPRRRAQSRLLEL 65

Query: 68  ECHVAINGCIPMTIAPGAEKPIFPHDICFSQAIG-------------------------- 127
           E HVAINGCIPMTIAPGAEKPI P+ + FSQAIG                          
Sbjct: 66  ERHVAINGCIPMTIAPGAEKPISPYAVHFSQAIGVCVRKTFPVRCLKWVDVGREYIEVVK 125

Query: 128 ----RLFVLDFNDQAMNRFIEHQMLTTFKEFRVDYHRHFKKYSDPEKARNNPPNALVGRH 187
               R FVLDFNDQAMNRF+EHQM+TTFKEF+VD HRHFKKYSDPE+AR NPPNALVGR 
Sbjct: 126 GDLQRFFVLDFNDQAMNRFVEHQMVTTFKEFQVDCHRHFKKYSDPEEARANPPNALVGRD 185

Query: 188 EDWYFLCDHYMSHAFQEQSSTNKAARQKQPYNHSSWSKSFLQRQYKLAERKGEPVDRVEL 247
           EDW+FL DHY+  AFQEQS TNKAARQKQPYNHSS SKSFLQRQY+LAERKGEPVD VEL
Sbjct: 186 EDWHFLYDHYIRRAFQEQSWTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDCVEL 245

Query: 248 FRETY---------AAEDAHNQMLELQSQPTPEGSQPLSEDEICD 254
           FRET+         AAEDAHNQMLELQSQPT EGSQPLSEDEICD
Sbjct: 246 FRETHVRAGTFMSQAAEDAHNQMLELQSQPTLEGSQPLSEDEICD 275

[Close]

BLAST of MELO3C030170.2.1 vs. NCBI nr
Match: XP_016901035.1 (PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo] >XP_016901036.1 PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo])

HSP 1 Score: 179.5 bits (454), Expect = 1.9e-41
Identity = 100/187 (53.48%), Postives = 108/187 (57.75%), Query Frame = 0


Query: 3   LTNHAMFLKFKDDLDNIEGGSLSVGDNTSESKIFFILTYDYFMVFFSATCDPTPRRRAQS 62
           L    MFL+F+DDLDN+ GGS SVGDN   S                     TPRRR QS
Sbjct: 9   LETDVMFLEFEDDLDNLAGGSSSVGDNAGSSS--------------QPPATQTPRRRVQS 68

Query: 63  RLLELECHVAINGCIPMTIAPGAEKPIFPHDICFSQAIG--------------------- 122
           RLLELECHV + GCIPM IAPGAE PIFP+ I FSQAIG                     
Sbjct: 69  RLLELECHVVVYGCIPMMIAPGAEMPIFPYAIRFSQAIGVCVQKTFFVCYLKWADIDREY 128

Query: 123 ---------RLFVLDFNDQAMNRFIEHQMLTTFKEFRVDYHRHFKKYSDPEKARNNPPNA 160
                    R FVLDFNDQA+NRF+EHQMLTTFKEF  D HRHFK      +AR NPPN 
Sbjct: 129 IEVVKGNLQRFFVLDFNDQAINRFVEHQMLTTFKEFWGDCHRHFK------EARANPPNV 175

[Close]

BLAST of MELO3C030170.2.1 vs. NCBI nr
Match: XP_016901155.1 (PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like [Cucumis melo])

HSP 1 Score: 151.8 bits (382), Expect = 4.2e-33
Identity = 85/171 (49.71%), Postives = 101/171 (59.06%), Query Frame = 0


Query: 3   LTNHAMFLKFKDDLDNIEGGSLSVGDNTSESKIFFILTYDYFMVFFSATCDPTPRRRAQS 62
           L    MFLKF  DLDN+ GGS S+ +N+  S                 +   TP+R  QS
Sbjct: 60  LETDVMFLKFAGDLDNLAGGSSSMDENSESSS--------------QPSATLTPKRHTQS 119

Query: 63  RLLELECHVAINGCIPMTIAPGAEKPIFPHDICFSQAIGRLFVLDFNDQAMNRFIEHQML 122
           RLLELEC+V     I +  A          D+ F       FVLDF+DQAMN  +E+QM 
Sbjct: 120 RLLELECYVTGREYIEVVKA----------DLQF-------FVLDFSDQAMNTSVEYQMS 179

Query: 123 TTFKEFRVDYHRHFKKYSDPEKARNNPPNALVGRHEDWYFLCDHYMSHAFQ 174
            TFKEF  D H+ FKKYSDPE+AR NPPN LVGR+EDW+FL DHYMSHAFQ
Sbjct: 180 NTFKEFWGDCHKQFKKYSDPEEARANPPNLLVGRNEDWHFLYDHYMSHAFQ 199

[Close]

BLAST of MELO3C030170.2.1 vs. NCBI nr
Match: XP_022156286.1 (uncharacterized protein LOC111023212 [Momordica charantia])

HSP 1 Score: 124.4 bits (311), Expect = 7.1e-25
Identity = 68/172 (39.53%), Postives = 104/172 (60.47%), Query Frame = 0


Query: 104 FVLDFNDQAMNRFIEHQMLTTFKEFRVDYHRHFKKYSDPEKARNNPPNALVGRHEDWYFL 163
           F +D + + +N+FIE QM  +FK++R D H+++ ++ DP +AR NPP  L    EDW  L
Sbjct: 21  FRVDLSKRVVNKFIEQQMQISFKQYRSDLHQYYCEFEDPVEARANPPERLT-NPEDWNHL 80

Query: 164 CDHYMSHAFQEQSSTNKAARQKQPYNHSSWSKSFLQRQYKLAERKGEPVDRVELFRETY- 223
           CD + +  ++E +  NK  R K P+NH + SKSFLQ Q++L  ++G  +  V+LF E++ 
Sbjct: 81  CDRWETPEWKEITKKNKKNRAKLPFNHRAGSKSFLQLQHELKIKEGSDIGPVDLFGESHY 140

Query: 224 ---------AAEDAHNQMLELQSQPTPEGSQPLSEDEICDQVLDRRPDYSKG 266
                     AEDA+  M  L   PT EG +P+++ E C +VL  RPD+ KG
Sbjct: 141 NEKDGLVNDNAEDAYENMQNLIKAPTQEGCEPVTQPEACRKVLGDRPDHVKG 191

[Close]

BLAST of MELO3C030170.2.1 vs. NCBI nr
Match: XP_019080375.1 (PREDICTED: uncharacterized protein LOC104881475 [Vitis vinifera])

HSP 1 Score: 111.7 bits (278), Expect = 4.8e-21
Identity = 59/166 (35.54%), Postives = 98/166 (59.04%), Query Frame = 0


Query: 104 FVLDFNDQAMNRFIEHQMLTTFKEFRVDYHRHFKKYSDPEKARNNPPNALVGRHEDWYFL 163
           F LD   + + + +E Q+   F+ +R D H+HFKK+    +A+ NP  + V   EDW +L
Sbjct: 87  FALDLTQEHVKKSLEKQLSDRFRNWRCDLHKHFKKFPTVVEAKRNPHES-VSNQEDWDYL 146

Query: 164 CDHYMSHAFQEQSSTNKAARQKQPYNHSSWSKSFLQRQYKLAERKGEPVDRVELFRET-Y 223
           CD + S  F+ +S+ N   R K P++H   S+SF+Q   +++   GE V ++ELF+   +
Sbjct: 147 CDRFSSEEFKRRSAINSVNRSKMPFHHRGGSRSFIQHGLQVSTENGEMVGQIELFKLVHW 206

Query: 224 AAEDA---HNQMLELQSQPTPEGSQPLSEDEICDQVLDRRPDYSKG 266
            ++D      +MLELQ QP  EG+  ++E +IC++VL ++  Y KG
Sbjct: 207 KSQDGWINQEKMLELQRQPIAEGAVAMTEAKICERVLGQKSGYVKG 251

[Close]

BLAST of MELO3C030170.2.1 vs. TrEMBL
Match: tr|E5GC72|E5GC72_CUCME (CACTA en-spm transposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 1.8e-96
Identity = 196/285 (68.77%), Postives = 208/285 (72.98%), Query Frame = 0


Query: 8   MFLKFKDDLDNIEGGSLSVGDNTSESKIFFILTYDYFMVFFSATCDPTPRRRAQSRLLEL 67
           MFL+F+DDLDNI GGS SVGDNT  S               S    PTPRRRAQSRLLEL
Sbjct: 6   MFLQFEDDLDNIAGGSSSVGDNTESS---------------SQQATPTPRRRAQSRLLEL 65

Query: 68  ECHVAINGCIPMTIAPGAEKPIFPHDICFSQAIG-------------------------- 127
           E HVAINGCIPMTIAPGAEKPI P+ + FSQAIG                          
Sbjct: 66  ERHVAINGCIPMTIAPGAEKPISPYAVHFSQAIGVCVRKTFPVRCLKWVDVGREYIEVVK 125

Query: 128 ----RLFVLDFNDQAMNRFIEHQMLTTFKEFRVDYHRHFKKYSDPEKARNNPPNALVGRH 187
               R FVLDFNDQAMNRF+EHQM+TTFKEF+VD HRHFKKYSDPE+AR NPPNALVGR 
Sbjct: 126 GDLQRFFVLDFNDQAMNRFVEHQMVTTFKEFQVDCHRHFKKYSDPEEARANPPNALVGRD 185

Query: 188 EDWYFLCDHYMSHAFQEQSSTNKAARQKQPYNHSSWSKSFLQRQYKLAERKGEPVDRVEL 247
           EDW+FL DHY+  AFQEQS TNKAARQKQPYNHSS SKSFLQRQY+LAERKGEPVD VEL
Sbjct: 186 EDWHFLYDHYIRRAFQEQSWTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDCVEL 245

Query: 248 FRETY---------AAEDAHNQMLELQSQPTPEGSQPLSEDEICD 254
           FRET+         AAEDAHNQMLELQSQPT EGSQPLSEDEICD
Sbjct: 246 FRETHVRAGTFMSQAAEDAHNQMLELQSQPTLEGSQPLSEDEICD 275

[Close]

BLAST of MELO3C030170.2.1 vs. TrEMBL
Match: tr|A0A1S4DZ93|A0A1S4DZ93_CUCME (uncharacterized protein LOC107991153 OS=Cucumis melo OX=3656 GN=LOC107991153 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41
Identity = 100/187 (53.48%), Postives = 108/187 (57.75%), Query Frame = 0


Query: 3   LTNHAMFLKFKDDLDNIEGGSLSVGDNTSESKIFFILTYDYFMVFFSATCDPTPRRRAQS 62
           L    MFL+F+DDLDN+ GGS SVGDN   S                     TPRRR QS
Sbjct: 9   LETDVMFLEFEDDLDNLAGGSSSVGDNAGSSS--------------QPPATQTPRRRVQS 68

Query: 63  RLLELECHVAINGCIPMTIAPGAEKPIFPHDICFSQAIG--------------------- 122
           RLLELECHV + GCIPM IAPGAE PIFP+ I FSQAIG                     
Sbjct: 69  RLLELECHVVVYGCIPMMIAPGAEMPIFPYAIRFSQAIGVCVQKTFFVCYLKWADIDREY 128

Query: 123 ---------RLFVLDFNDQAMNRFIEHQMLTTFKEFRVDYHRHFKKYSDPEKARNNPPNA 160
                    R FVLDFNDQA+NRF+EHQMLTTFKEF  D HRHFK      +AR NPPN 
Sbjct: 129 IEVVKGNLQRFFVLDFNDQAINRFVEHQMLTTFKEFWGDCHRHFK------EARANPPNV 175

[Close]

BLAST of MELO3C030170.2.1 vs. TrEMBL
Match: tr|A0A1S4DZJ7|A0A1S4DZJ7_CUCME (LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103493054 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.8e-33
Identity = 85/171 (49.71%), Postives = 101/171 (59.06%), Query Frame = 0


Query: 3   LTNHAMFLKFKDDLDNIEGGSLSVGDNTSESKIFFILTYDYFMVFFSATCDPTPRRRAQS 62
           L    MFLKF  DLDN+ GGS S+ +N+  S                 +   TP+R  QS
Sbjct: 60  LETDVMFLKFAGDLDNLAGGSSSMDENSESSS--------------QPSATLTPKRHTQS 119

Query: 63  RLLELECHVAINGCIPMTIAPGAEKPIFPHDICFSQAIGRLFVLDFNDQAMNRFIEHQML 122
           RLLELEC+V     I +  A          D+ F       FVLDF+DQAMN  +E+QM 
Sbjct: 120 RLLELECYVTGREYIEVVKA----------DLQF-------FVLDFSDQAMNTSVEYQMS 179

Query: 123 TTFKEFRVDYHRHFKKYSDPEKARNNPPNALVGRHEDWYFLCDHYMSHAFQ 174
            TFKEF  D H+ FKKYSDPE+AR NPPN LVGR+EDW+FL DHYMSHAFQ
Sbjct: 180 NTFKEFWGDCHKQFKKYSDPEEARANPPNLLVGRNEDWHFLYDHYMSHAFQ 199

[Close]

BLAST of MELO3C030170.2.1 vs. TrEMBL
Match: tr|Q75M57|Q75M57_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os03g26360 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.4e-16
Identity = 54/171 (31.58%), Postives = 92/171 (53.80%), Query Frame = 0


Query: 104 FVLDFNDQAMNRFIEHQMLTTFKEFRVDYHRHFKKYSDPEKARNNPPNALVGRHEDWYFL 163
           F LD N++ +   +E    +++K FR  ++ H+ K+   E AR NP  AL  R  DW++L
Sbjct: 17  FDLDLNEENVKGCVELMFSSSYKSFRHRFYEHYVKHGGGENARMNPHKALEDRLADWFWL 76

Query: 164 CDHYMSHAFQEQSSTNKAARQKQPYNHSSWSKSFLQRQYKLAERKGEPVDRVELFRETYA 223
           CDH+ +  FQ++S+  K  R   PY H   +KSF+  Q++L          + L++E Y+
Sbjct: 77  CDHFETEEFQKRSTIGKDNRSNLPYMHWKGTKSFVALQHELG------CGDITLYKECYS 136

Query: 224 ---------AEDAHNQMLELQSQPTPEGSQPLSEDEICDQVLDRRPDYSKG 266
                    A + H+QM+ +Q +   +   PL+E +IC++VL +   Y +G
Sbjct: 137 NDKGWASSDAREKHDQMVRMQEESMQQDEIPLTEPQICEKVLGKAYGYIRG 181

[Close]

BLAST of MELO3C030170.2.1 vs. TrEMBL
Match: tr|B9F8Q4|B9F8Q4_ORYSJ (Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_11060 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.4e-16
Identity = 54/171 (31.58%), Postives = 92/171 (53.80%), Query Frame = 0


Query: 104 FVLDFNDQAMNRFIEHQMLTTFKEFRVDYHRHFKKYSDPEKARNNPPNALVGRHEDWYFL 163
           F LD N++ +   +E    +++K FR  ++ H+ K+   E AR NP  AL  R  DW++L
Sbjct: 113 FDLDLNEENVKGCVELMFSSSYKSFRHRFYEHYVKHGGGENARMNPHKALEDRLADWFWL 172

Query: 164 CDHYMSHAFQEQSSTNKAARQKQPYNHSSWSKSFLQRQYKLAERKGEPVDRVELFRETYA 223
           CDH+ +  FQ++S+  K  R   PY H   +KSF+  Q++L          + L++E Y+
Sbjct: 173 CDHFETEEFQKRSTIGKDNRSNLPYMHWKGTKSFVALQHELG------CGDITLYKECYS 232

Query: 224 ---------AEDAHNQMLELQSQPTPEGSQPLSEDEICDQVLDRRPDYSKG 266
                    A + H+QM+ +Q +   +   PL+E +IC++VL +   Y +G
Sbjct: 233 NDKGWASSDAREKHDQMVRMQEESMQQDEIPLTEPQICEKVLGKAYGYIRG 277

The following BLAST results are available for this feature:

BLAST of MELO3C030170.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34071.1	2.7e-96	68.77	CACTA en-spm transposon protein [Cucumis melo subsp. melo]	[more]
XP_016901035.1	1.9e-41	53.48	PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo] >XP_016901036.1 P...	[more]
XP_016901155.1	4.2e-33	49.71	PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochond...	[more]
XP_022156286.1	7.1e-25	39.53	uncharacterized protein LOC111023212 [Momordica charantia]	[more]
XP_019080375.1	4.8e-21	35.54	PREDICTED: uncharacterized protein LOC104881475 [Vitis vinifera]	[more]

BLAST of MELO3C030170.2.1 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C030170.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C030170.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GC72\|E5GC72_CUCME	1.8e-96	68.77	CACTA en-spm transposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S4DZ93\|A0A1S4DZ93_CUCME	1.2e-41	53.48	uncharacterized protein LOC107991153 OS=Cucumis melo OX=3656 GN=LOC107991153 PE=...	[more]
tr\|A0A1S4DZJ7\|A0A1S4DZJ7_CUCME	2.8e-33	49.71	LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like O...	[more]
tr\|Q75M57\|Q75M57_ORYSJ	1.4e-16	31.58	Expressed protein OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os03g26360 PE=...	[more]
tr\|B9F8Q4\|B9F8Q4_ORYSJ	1.4e-16	31.58	Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_11060 PE...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR004252	Probable_transposase_24

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0008483	transaminase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C030170.2	MELO3C030170.2	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C030170.2.1.exon.1	MELO3C030170.2.1.exon.1	exon
MELO3C030170.2.1.exon.2	MELO3C030170.2.1.exon.2	exon
MELO3C030170.2.1.exon.3	MELO3C030170.2.1.exon.3	exon
MELO3C030170.2.1.exon.4	MELO3C030170.2.1.exon.4	exon
MELO3C030170.2.1.exon.5	MELO3C030170.2.1.exon.5	exon
MELO3C030170.2.1.exon.6	MELO3C030170.2.1.exon.6	exon
MELO3C030170.2.1.exon.7	MELO3C030170.2.1.exon.7	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C030170.2.1.CDS.1	MELO3C030170.2.1.CDS.1	CDS
MELO3C030170.2.1.CDS.2	MELO3C030170.2.1.CDS.2	CDS
MELO3C030170.2.1.CDS.3	MELO3C030170.2.1.CDS.3	CDS
MELO3C030170.2.1.CDS.4	MELO3C030170.2.1.CDS.4	CDS
MELO3C030170.2.1.CDS.5	MELO3C030170.2.1.CDS.5	CDS
MELO3C030170.2.1.CDS.6	MELO3C030170.2.1.CDS.6	CDS
MELO3C030170.2.1.CDS.7	MELO3C030170.2.1.CDS.7	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C030170.2.1	MELO3C030170.2.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 286..306
None	No IPR available	PANTHER	PTHR33499	FAMILY NOT NAMED	coord: 115..316
IPR004252	Probable transposase, Ptta/En/Spm, plant	PFAM	PF03004	Transposase_24	coord: 158..227 e-value: 1.2E-12 score: 48.1