MELO3C020777T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C020777T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Urb2/Npa2, putative isoform 4
Location	chr11 : 4199995 .. 4201461 (-)
Sequence length	1122

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTGATAGCCACACTCGAGAGATTAACTATAGGTGTTTGCAGTGGCAAACGCACTCCTGATGATAATGCTCTCCTTGCAAAAGCAGTTAATCTTTCTTGTGATATGTTACACACAGAAGATTGCAAGTTGAAGGGTGATTCATCTGAAAGCAATGTGAGAATTAGAGATTGTCAGCATCTGATTAACCTTTTATGTCTGATGCCAATGGGAAATATGAGTTCAAGGTCCTTTTCCCTTTATACGACTCATGTTCTTGAACTTGAAAGGTATGCATTTTTCGTGTCTTCGTTGCTCTTTCTTCCTATTAATGGTGCTGCAGATGTTTCTTACTTTGCAGGATAGCGTAGAACTCACTCTTATACTGTAAGACACTTCTTGTTGTATGTCATTGTTTTGATATCAATGCTATTAATGAGACAATAAATAGTCGAATAACAAAACAATCTCAAGTGAATCTTGGAAGCTGGTTTGTTCTGTAGTTTCTTGGAGTGTCATAGTTTAGAGTCCTTTTTACTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTAAAACTTTTCTTTTNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTAAAAATTTCTTTGTTTTCCAGGATACTGGTGAATGCTTTATTAGATAATCAGACTGCTCTATGTTCAAATCAATTTGAACTCCTCAAATTGTTTGCATCTTGTCGGAAGGCCTTGAAATATATATTTATGACTTACTGTGAGGCTGATAATGGACAGAGCTCATCTGTTCCAATTCTATCTGAAAATCAATTTCCTGTTTTATGGCTTTTCAAGTCTTTGTCTCTTGTTAATCAAATTCAAGAAGTCTCTCCGGAAGGTACTGACAGACAAATTAAGGACATCATCTTTTCATTGATGGATCATACATTATACTTGTTTTTAGCAACTAGCAAATATCAATTTAAGGAGGCACTCTGCATAATTGTAAATGACAACAAACCCTCCAAGGAGCAACACCAGGACGTGTGCCAAGAACTAAATGATGGGGATGATTTATGTTTAGATTCCATTCACAGTGTAGAAGTATGCAATAGTGCTATTCAAATGAGTAACAGTTTGAAGGAACAGGTGGAGAGTGAACTTATCTCTCTGAAGAAGTCTAATTTTCCAATTGGAGATTCTAAAAATAGAGCCGATATTTGTAAATTTAATTCTCTAGCTTCTTGCCTTAATGGATTTTTATGCGGCCTAGCATCTGTTGACCATACTGATTTGAGGAATGGTAACCATCGTATGAGATCAATGAAGTTGAAACGTGAATATAGTTCTGAACTGAACAATTGCATTAATTCAATTTCAGAATTATTAGGCCTCATCTTGGAAATGTTTCTTGATAGAGATAGTCAATTGCCGAAAAACTTGTGTGATTATCAAGCACTTCAAGACCTAGAATCTTCTTATTGTGATGATGACAGTGAAAATGTTACCTAA

mRNA sequence

ATGGAGGTGATAGCCACACTCGAGAGATTAACTATAGGTGTTTGCAGTGGCAAACGCACTCCTGATGATAATGCTCTCCTTGCAAAAGCAGTTAATCTTTCTTGTGATATGTTACACACAGAAGATTGCAAGTTGAAGGGTGATTCATCTGAAAGCAATGTGAGAATTAGAGATTGTCAGCATCTGATTAACCTTTTATGTCTGATGCCAATGGGAAATATGAGTTCAAGGTCCTTTTCCCTTTATACGACTCATGTTCTTGAACTTGAAAGGATACTGGTGAATGCTTTATTAGATAATCAGACTGCTCTATGTTCAAATCAATTTGAACTCCTCAAATTGTTTGCATCTTGTCGGAAGGCCTTGAAATATATATTTATGACTTACTGTGAGGCTGATAATGGACAGAGCTCATCTGTTCCAATTCTATCTGAAAATCAATTTCCTGTTTTATGGCTTTTCAAGTCTTTGTCTCTTGTTAATCAAATTCAAGAAGTCTCTCCGGAAGGTACTGACAGACAAATTAAGGACATCATCTTTTCATTGATGGATCATACATTATACTTGTTTTTAGCAACTAGCAAATATCAATTTAAGGAGGCACTCTGCATAATTGTAAATGACAACAAACCCTCCAAGGAGCAACACCAGGACGTGTGCCAAGAACTAAATGATGGGGATGATTTATGTTTAGATTCCATTCACAGTGTAGAAGTATGCAATAGTGCTATTCAAATGAGTAACAGTTTGAAGGAACAGGTGGAGAGTGAACTTATCTCTCTGAAGAAGTCTAATTTTCCAATTGGAGATTCTAAAAATAGAGCCGATATTTGTAAATTTAATTCTCTAGCTTCTTGCCTTAATGGATTTTTATGCGGCCTAGCATCTGTTGACCATACTGATTTGAGGAATGGTAACCATCGTATGAGATCAATGAAGTTGAAACGTGAATATAGTTCTGAACTGAACAATTGCATTAATTCAATTTCAGAATTATTAGGCCTCATCTTGGAAATGTTTCTTGATAGAGATAGTCAATTGCCGAAAAACTTGTGTGATTATCAAGCACTTCAAGACCTAGAATCTTCTTATTGTGATGATGACAGTGAAAATGTTACCTAA

Coding sequence (CDS)

ATGGAGGTGATAGCCACACTCGAGAGATTAACTATAGGTGTTTGCAGTGGCAAACGCACTCCTGATGATAATGCTCTCCTTGCAAAAGCAGTTAATCTTTCTTGTGATATGTTACACACAGAAGATTGCAAGTTGAAGGGTGATTCATCTGAAAGCAATGTGAGAATTAGAGATTGTCAGCATCTGATTAACCTTTTATGTCTGATGCCAATGGGAAATATGAGTTCAAGGTCCTTTTCCCTTTATACGACTCATGTTCTTGAACTTGAAAGGATACTGGTGAATGCTTTATTAGATAATCAGACTGCTCTATGTTCAAATCAATTTGAACTCCTCAAATTGTTTGCATCTTGTCGGAAGGCCTTGAAATATATATTTATGACTTACTGTGAGGCTGATAATGGACAGAGCTCATCTGTTCCAATTCTATCTGAAAATCAATTTCCTGTTTTATGGCTTTTCAAGTCTTTGTCTCTTGTTAATCAAATTCAAGAAGTCTCTCCGGAAGGTACTGACAGACAAATTAAGGACATCATCTTTTCATTGATGGATCATACATTATACTTGTTTTTAGCAACTAGCAAATATCAATTTAAGGAGGCACTCTGCATAATTGTAAATGACAACAAACCCTCCAAGGAGCAACACCAGGACGTGTGCCAAGAACTAAATGATGGGGATGATTTATGTTTAGATTCCATTCACAGTGTAGAAGTATGCAATAGTGCTATTCAAATGAGTAACAGTTTGAAGGAACAGGTGGAGAGTGAACTTATCTCTCTGAAGAAGTCTAATTTTCCAATTGGAGATTCTAAAAATAGAGCCGATATTTGTAAATTTAATTCTCTAGCTTCTTGCCTTAATGGATTTTTATGCGGCCTAGCATCTGTTGACCATACTGATTTGAGGAATGGTAACCATCGTATGAGATCAATGAAGTTGAAACGTGAATATAGTTCTGAACTGAACAATTGCATTAATTCAATTTCAGAATTATTAGGCCTCATCTTGGAAATGTTTCTTGATAGAGATAGTCAATTGCCGAAAAACTTGTGTGATTATCAAGCACTTCAAGACCTAGAATCTTCTTATTGTGATGATGACAGTGAAAATGTTACCTAA

Protein sequence

MEVIATLERLTIGVCSGKRTPDDNALLAKAVNLSCDMLHTEDCKLKGDSSESNVRIRDCQHLINLLCLMPMGNMSSRSFSLYTTHVLELERILVNALLDNQTALCSNQFELLKLFASCRKALKYIFMTYCEADNGQSSSVPILSENQFPVLWLFKSLSLVNQIQEVSPEGTDRQIKDIIFSLMDHTLYLFLATSKYQFKEALCIIVNDNKPSKEQHQDVCQELNDGDDLCLDSIHSVEVCNSAIQMSNSLKEQVESELISLKKSNFPIGDSKNRADICKFNSLASCLNGFLCGLASVDHTDLRNGNHRMRSMKLKREYSSELNNCINSISELLGLILEMFLDRDSQLPKNLCDYQALQDLESSYCDDDSENVT*

Homology

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BLAST of MELO3C020777T1 vs. TrEMBL
Match: A0A0A0LM80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G263870 PE=4 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 2.2e-190
Identity = 339/374 (90.64%), Postives = 349/374 (93.32%), Query Frame = 1


Query: 1    MEVIATLERLTIGVCSGKRTPDDNALLAKAVNLSCDMLHTEDCKLKGDSSESNVRIRDCQ 60
            MEVIATLE L IGVCSGK TPDD+ALLA  VNLS DMLH EDCKLKGDSSESNVRIRDCQ
Sbjct: 1123 MEVIATLEHLAIGVCSGKHTPDDSALLANTVNLSSDMLHAEDCKLKGDSSESNVRIRDCQ 1182

Query: 61   HLINLLCLMPMGNMSSRSFSLYTTHVLELERILVNALLDNQTALCSNQFELLKLFASCRK 120
            HLI LLCLMPMGNMSS+SFSLYTTHVLELERILVNALLDNQTALCSN+FELLKLFASCRK
Sbjct: 1183 HLIKLLCLMPMGNMSSKSFSLYTTHVLELERILVNALLDNQTALCSNKFELLKLFASCRK 1242

Query: 121  ALKYIFMTYCEADNGQSSSVPILSENQFPVLWLFKSLSLVNQIQEVSPEGTDRQIKDIIF 180
            ALKYIF  YCEA NGQSSSVPILSENQFP LWLFKSLSLVNQIQEVSPEGTDRQIKDIIF
Sbjct: 1243 ALKYIFRAYCEAANGQSSSVPILSENQFPFLWLFKSLSLVNQIQEVSPEGTDRQIKDIIF 1302

Query: 181  SLMDHTLYLFLATSKYQFKEALCIIVNDNKPSKEQHQDVCQELNDGDDLCLDSIHSVEVC 240
            SLMDHTLYLFL TSKYQFKEALC  V  NKP KEQ QDVCQ+LNDGDDLCLDSIHSVEVC
Sbjct: 1303 SLMDHTLYLFLTTSKYQFKEALCTSVKVNKPCKEQPQDVCQDLNDGDDLCLDSIHSVEVC 1362

Query: 241  NSAIQMSNSLKEQVESELISLKKSNFPIGDSKNRADICKFNSLASCLNGFLCGLASV-DH 300
            +SAIQMSNSLKEQVESELISLKKSNF +GD+KNRADICKFNSLASCLNGFL GLASV DH
Sbjct: 1363 SSAIQMSNSLKEQVESELISLKKSNFAVGDAKNRADICKFNSLASCLNGFLWGLASVDDH 1422

Query: 301  TDLRNGNHRMRSMKLKREYSSELNNCINSISELLGLILEMFLDRDSQLPKNLCDYQALQD 360
            TDLR GNH MRSMKLKREYSSELNNC+N+ISELLGLILEMFLDRDSQLPKNLCDYQA QD
Sbjct: 1423 TDLRKGNHHMRSMKLKREYSSELNNCMNAISELLGLILEMFLDRDSQLPKNLCDYQAFQD 1482

Query: 361  LESSYCDDDSENVT 374
            LESSYCDDDSENV+
Sbjct: 1483 LESSYCDDDSENVS 1496

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BLAST of MELO3C020777T1 vs. TrEMBL
Match: M5VLU9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000049mg PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.2e-57
Identity = 143/365 (39.18%), Postives = 210/365 (57.53%), Query Frame = 1


Query: 2    EVIATLERLTIGVCSGKRTPDDNALLAKAVNLSCDMLHTEDCKLKGDSSESNVRIRDCQH 61
            +V+ +LE  ++ V        D +  A  V  S D L     K + D   + ++   CQ 
Sbjct: 1169 KVLNSLENSSVVVSCKNHYIFDCSSAASPVTHSSDELRKGSFKEQKDLQSTIMKFIACQS 1228

Query: 62   LINLLCLMPMGNMSSRSFSLYTTHVLELERILVNALLDNQTALCSNQF-ELLKLFASCRK 121
            L+NLLC MP  + +SR+FSLY T +L LER++V  LLD Q AL S+ + EL +LF SCRK
Sbjct: 1229 LLNLLCCMPKSHFNSRAFSLYVTSILNLERLVVGGLLDYQNALYSHHYHELFRLFVSCRK 1288

Query: 122  ALKYIFMTYCEAD--NGQSSSVPILSENQFPVLWLFKSLSLVNQIQEVSPEGTDRQIKDI 181
            ALKYI +  CE    + Q+S   +  E+ FP+LWL+KS+  V  ++E  P+   R + D+
Sbjct: 1289 ALKYIILA-CEGKTADSQTSHTLVFFEDSFPILWLYKSVYAVVGLEESLPKDNCRPVSDM 1348

Query: 182  IFSLMDHTLYLFLATSKYQFKEALCI--IVNDNKPSKEQHQDVCQELNDGDDLCLDSIHS 241
            I SLMDHT Y+FL  SKYQ   A+    +   N     +H  + +      D+CLDS   
Sbjct: 1349 ILSLMDHTFYVFLTLSKYQSNHAVHFSKVAELNAGLVHEHSSLSE-----SDMCLDSSDY 1408

Query: 242  VEVCNSAIQMSNSLKEQVESELISLKKS--NFPIGDSKNRADICKFNSLASCLNGFLCGL 301
            +E   S   ++ SLKEQ++S L++LK +  N  +G   +  ++ KF+SL SC++GFL GL
Sbjct: 1409 IEAWKSVTIIAKSLKEQMQSLLVNLKDALCNGKVGIGVDGLNLNKFSSLISCISGFLWGL 1468

Query: 302  AS-VDHTDLRNGNHRMRSMKLKREYSSELNNCINSISELLGLILEMFLDRDSQLPKNLCD 359
            A  V+HTD R+ +H++ S + K E  SEL+ CI+  +E   L+L M +   SQ  + LCD
Sbjct: 1469 ACFVNHTDSRSSDHKVNSSRQKLEPISELHLCIDVFAEFCSLLLPMLVCDSSQQSRTLCD 1527

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BLAST of MELO3C020777T1 vs. TrEMBL
Match: B9H146_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s17490g PE=4 SV=2)

HSP 1 Score: 206.5 bits (524), Expect = 5.8e-50
Identity = 127/331 (38.37%), Postives = 196/331 (59.21%), Query Frame = 1


Query: 54   VRIRDCQHLINLLCLMPMGNMSSRSFSLYTTHVLELERILVNALLDNQTALCSN-QFELL 113
            V+   CQ L+ LLC MP G ++S+SFSLY T  L LER+++  LL+   +  S+ Q+ELL
Sbjct: 1192 VKFTACQSLLRLLCWMPKGYINSKSFSLYVTSTLNLERLVIGHLLECGDSFFSHKQYELL 1251

Query: 114  KLFASCRKALKYIFMTYCEAD--NGQSSSVPILSENQFPVLWLFKSLSLVNQIQEVSPEG 173
            +L  +CR+ALK + M YCE       S+ +P+L E+   VLWL +S+S+V ++QE   E 
Sbjct: 1252 RLLVACRRALKCLIMAYCEEKVRTTHSALIPVLFEDVHSVLWLSRSVSVVFRLQETLSED 1311

Query: 174  TDRQIKDIIFSLMDHTLYLFLATSKYQFKEALCIIVNDNKPSKEQ-HQDVCQELNDGDDL 233
               ++ D+IFSLMDHT Y+FL  SKYQ   A+ II    KP  EQ + DV QE +  ++ 
Sbjct: 1312 KACEVADMIFSLMDHTSYVFLTLSKYQCPSAVSIIA--EKPYTEQLNSDVTQEQSSVNES 1371

Query: 234  --CLDSIHSVEVCNSAIQMSNSLKEQVESELISLKKSNFPIGDSKN-RADICKFNSLASC 293
              CLD+ + VE C S I ++ SLKEQ +  +ISLK ++     S     D  K +S+ SC
Sbjct: 1372 LPCLDTSNDVESCKSVILIAESLKEQAQDLIISLKDAHCNEKSSDEIDVDWNKLSSMVSC 1431

Query: 294  LNGFLCGLAS-VDHTDLRNGNHRMRSMKLKREYSSELNNCINSISELLGLILEMFLDRDS 353
             +GF+ GLAS +DH++  + +++ + ++ K E  S++++CIN+ ++ +     M   +D 
Sbjct: 1432 FSGFMWGLASALDHSNATDSDYKAKLLRWKCEVISKISHCINAFADFICFSFHMLFVKDD 1491

Query: 354  QLPKNLC---DYQALQDLESSYCDDDSENVT 374
              P +L    ++    D +SS    DS  VT
Sbjct: 1492 LQPNHLSATGNFVKSDDRDSSLVSGDSWKVT 1520

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BLAST of MELO3C020777T1 vs. TrEMBL
Match: F6I148_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g01490 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 4.9e-49
Identity = 126/310 (40.65%), Postives = 177/310 (57.10%), Query Frame = 1


Query: 59   CQHLINLLCLMPMGNMSSRSFSLYTTHVLELERILVNALLDNQTALCS-NQFELLKLFAS 118
            CQ  +NLLC MP G ++SRSFSLYTT +L LER +V  L+    ALCS N +EL +LF S
Sbjct: 1163 CQSSLNLLCWMPKGYLNSRSFSLYTTCILNLERFVVCRLIKCHCALCSHNHYELYRLFLS 1222

Query: 119  CRKALKYIFMTYCEA--DNGQSSSVPILSENQFPVLWLFKSLSLVNQIQEVSPEGTDRQI 178
            CR+ LK++ M +CE   +  QSS   I  E  FPVLWL KS+S++  +Q    E    Q 
Sbjct: 1223 CRRTLKHLIMAFCEEKMEASQSSLTSIFPEVSFPVLWLLKSVSVMVGLQHTFSEDRASQF 1282

Query: 179  KDIIFSLMDHTLYLFLATSKYQFKEALCIIVNDNKPSKEQ-HQDVCQELN--DGDDLCLD 238
            + + FSLMD T Y+FL  SK QF   +   +N  K   EQ + D+  E +     D C D
Sbjct: 1283 RYMSFSLMDQTSYVFLMFSKSQFSHVVHFSMNVKKSCAEQLNSDLVHEESHLTETDPCSD 1342

Query: 239  SIHSVEVCNSAIQMSNSLKEQVESELISLKKSNFPIGDSKNRADICKFNSLASCLNGFLC 298
            S  +V+   + + ++ +LKEQ E+ LISLK +           D+ + +SL SC  GF+ 
Sbjct: 1343 SSKAVDAWKNVVLVAEALKEQTENLLISLKDALCNKRVEVGTVDLNRLSSLVSCFQGFMW 1402

Query: 299  GLAS-VDHTDLRNGNHRMRSMKLKREYSSELNNCINSISELLGLILEMFLDRDSQLPKNL 358
            GLAS ++H D++  +  M+ +K K E  S+LN CIN  ++ +   L MFL  D Q P+ L
Sbjct: 1403 GLASAMNHIDVKECDDEMKLLKWKNEPFSKLNLCINVFTDFIDFSLCMFLIEDDQQPEGL 1462

Query: 359  CDYQALQDLE 362
               Q L  L+
Sbjct: 1463 GGAQNLSGLD 1472

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BLAST of MELO3C020777T1 vs. TrEMBL
Match: A0A061DYK2_THECC (Urb2/Npa2, putative isoform 1 OS=Theobroma cacao GN=TCM_006698 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.7e-47
Identity = 137/371 (36.93%), Postives = 201/371 (54.18%), Query Frame = 1


Query: 2    EVIATLERLTIGVCSGKRTPDDNALLAKAVNLSCDMLHTEDCKLKGDSSESNVRIRDCQH 61
            EV++ L+  +  VCS +    D+A  A++++ S D L +E    +      NV+ +DCQ 
Sbjct: 1182 EVLSKLDNSSTVVCSRRDVKHDSA--ARSISNSSDRLPSEISMKQKAFPIENVKFKDCQS 1241

Query: 62   LINLLCLMPMGNMSSRSFSLYTTHVLELERILVNALLDNQTALCSNQ-FELLKLFASCRK 121
            L+NLLC MP G ++S+SF   T +VL LERI+V  LL  Q AL SN  +EL +LF +CR+
Sbjct: 1242 LLNLLCWMPKGYLNSKSFCQLTAYVLNLERIVVEDLLGCQGALSSNGCYELFQLFVACRR 1301

Query: 122  ALKYIFMTYCEAD-NGQSSSVPILSENQFPVLWLFKSLSLVNQIQEVSPEGTDRQIKDII 181
             LK I M  CE    G  SS+  ++E    V+WLFKS+S V  + +   E    + +  I
Sbjct: 1302 TLKNIIMASCEEKIEGSLSSLLSVAEGSSFVIWLFKSVSTVIGVLDTMMEDCLPEFELKI 1361

Query: 182  FSLMDHTLYLFLATSKYQFKEALCIIVNDNKPSKEQ-HQDVC--QELNDGDDLCLDSIHS 241
            F LMDHT Y+F A SKYQF +A+  I N  KP K+Q +  V   + + +    C + +  
Sbjct: 1362 FLLMDHTSYVFFAISKYQFGQAVHFIGNSEKPCKKQPYSGVVGDESILNQPGSCSNYLKD 1421

Query: 242  VEVCNSAIQMSNSLKEQVESELISLK---KSNFPIGDSKNRADICKFNSLASCLNGFLCG 301
             E   S    + +LKEQ ES L  LK     N  +GD     +  K +   SC  GFL G
Sbjct: 1422 SEALRSLSITAENLKEQAESLLDPLKGALDDNAKVGDGNKAVNTNKMSFAISCFGGFLWG 1481

Query: 302  LAS-VDHTDLRNGNHRMRSMKLKREYSSELNNCINSISELLGLILEMFLDRDSQLPKNLC 361
            LAS ++  D ++G    + ++ K E  S+LN CIN   + +  +  MFLD D Q  ++  
Sbjct: 1482 LASALNQGDEKSGEVNAKYLRWKCEPLSKLNICINVFLDFISEVFHMFLDNDQQ-SRSYY 1541

Query: 362  DYQALQDLESS 364
            D ++ Q L+ S
Sbjct: 1542 DAESSQKLDYS 1549

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BLAST of MELO3C020777T1 vs. TAIR10
Match: AT4G30150.1 (AT4G30150.1 Nucleolar 27S pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849))

HSP 1 Score: 117.9 bits (294), Expect = 1.4e-26
Identity = 92/297 (30.98%), Postives = 148/297 (49.83%), Query Frame = 1


Query: 53   NVRIRDCQHLINLLCLMPMGNMSSRSFSLYTTHVLELERILVNALLDNQTAL-CSNQFEL 112
            N +   CQ+L+NLL +MP    + +SF LY ++VL+LER +V ++L     L C +   L
Sbjct: 1182 NRKFTACQNLLNLLGVMPKEYTNKKSFQLYASYVLDLERFIVFSMLRCLNKLSCGDMQNL 1241

Query: 113  LKLFASCRKALKYIFMTYCEADNGQSSSVPILSENQFPVLWLFKSLSLVNQIQEVSPEGT 172
              LF++CRK LK I M  C+   G ++ +P LS++     WLFKS            + T
Sbjct: 1242 FSLFSTCRKTLKSIAMISCDKVLG-ATKLP-LSDSSLLASWLFKSAQAATCQVRFRNDVT 1301

Query: 173  DRQIKDIIFSLMDHTLYLFLATSKYQFKEALCIIVNDNKPSKEQHQDVCQELNDGDDLCL 232
             +  +D +FSLMDHT Y+FL  SKYQF +AL        P  ++ + +  E+++G     
Sbjct: 1302 GK-ARDALFSLMDHTSYMFLTVSKYQFSKAL--------PFSDE-KLISSEISEGTGQA- 1361

Query: 233  DSIHSVEVCNSAIQMSNSLKEQVESELISLKKSNFPIGDSKNRADICKFNSLASCLNGFL 292
             ++    +   A  + N+L+     E  + K  +  +          K   + SC +G L
Sbjct: 1362 -NLIIENLTEQAETLLNALRATFRDEKTAFKCESLILN---------KLTPIFSCFSGLL 1421

Query: 293  CGLAS-VDHTDLRNGNHRMRSMKLKREYSSELNNCINSISELLGLILE-MFLDRDSQ 347
             GLAS V + D++  NH+   ++ K E  S+L+  I+ +S    +  + +FL  D Q
Sbjct: 1422 WGLASAVSNRDMQK-NHQNAKLRWKSEQFSKLSRIIHVLSNFFEVFAQCLFLSGDVQ 1454

[Close]

BLAST of MELO3C020777T1 vs. NCBI nr
Match: gi|659115616|ref|XP_008457645.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103497293 [Cucumis melo])

HSP 1 Score: 747.7 bits (1929), Expect = 1.0e-212
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 1


Query: 1    MEVIATLERLTIGVCSGKRTPDDNALLAKAVNLSCDMLHTEDCKLKGDSSESNVRIRDCQ 60
            MEVIATLERLTIGVCSGKRTPDDNALLAKAVNLSCDMLHTEDCKLKGDSSESNVRIRDCQ
Sbjct: 1084 MEVIATLERLTIGVCSGKRTPDDNALLAKAVNLSCDMLHTEDCKLKGDSSESNVRIRDCQ 1143

Query: 61   HLINLLCLMPMGNMSSRSFSLYTTHVLELERILVNALLDNQTALCSNQFELLKLFASCRK 120
            HLINLLCLMPMGNMSSRSFSLYTTHVLELERILVNALLDNQTALCSNQFELLKLFASCRK
Sbjct: 1144 HLINLLCLMPMGNMSSRSFSLYTTHVLELERILVNALLDNQTALCSNQFELLKLFASCRK 1203

Query: 121  ALKYIFMTYCEADNGQSSSVPILSENQFPVLWLFKSLSLVNQIQEVSPEGTDRQIKDIIF 180
            ALKYIFMTYCEADNGQSSSVPILSENQFPVLWLFKSLSLVNQIQEVSPEGTDRQIKDIIF
Sbjct: 1204 ALKYIFMTYCEADNGQSSSVPILSENQFPVLWLFKSLSLVNQIQEVSPEGTDRQIKDIIF 1263

Query: 181  SLMDHTLYLFLATSKYQFKEALCIIVNDNKPSKEQHQDVCQELNDGDDLCLDSIHSVEVC 240
            SLMDHTLYLFLATSKYQFKEALCIIVNDNKPSKEQHQDVCQELNDGDDLCLDSIHSVEVC
Sbjct: 1264 SLMDHTLYLFLATSKYQFKEALCIIVNDNKPSKEQHQDVCQELNDGDDLCLDSIHSVEVC 1323

Query: 241  NSAIQMSNSLKEQVESELISLKKSNFPIGDSKNRADICKFNSLASCLNGFLCGLASVDHT 300
            NSAIQMSNSLKEQVESELISLKKSNFPIGDSKNRADICKFNSLASCLNGFLCGLASVDHT
Sbjct: 1324 NSAIQMSNSLKEQVESELISLKKSNFPIGDSKNRADICKFNSLASCLNGFLCGLASVDHT 1383

Query: 301  DLRNGNHRMRSMKLKREYSSELNNCINSISELLGLILEMFLDRDSQLPKNLCDYQALQDL 360
            DLRNGNHRMRSMKLKREYSSELNNCINSISELLGLILEMFLDRDSQLPKNLCDYQALQDL
Sbjct: 1384 DLRNGNHRMRSMKLKREYSSELNNCINSISELLGLILEMFLDRDSQLPKNLCDYQALQDL 1443

Query: 361  ESSYCDDDSENVT 374
            ESSYCDDDSENVT
Sbjct: 1444 ESSYCDDDSENVT 1456

[Close]

BLAST of MELO3C020777T1 vs. NCBI nr
Match: gi|778669621|ref|XP_011649280.1| (PREDICTED: uncharacterized protein LOC101208263 [Cucumis sativus])

HSP 1 Score: 672.9 bits (1735), Expect = 3.2e-190
Identity = 339/374 (90.64%), Postives = 349/374 (93.32%), Query Frame = 1


Query: 1    MEVIATLERLTIGVCSGKRTPDDNALLAKAVNLSCDMLHTEDCKLKGDSSESNVRIRDCQ 60
            MEVIATLE L IGVCSGK TPDD+ALLA  VNLS DMLH EDCKLKGDSSESNVRIRDCQ
Sbjct: 1123 MEVIATLEHLAIGVCSGKHTPDDSALLANTVNLSSDMLHAEDCKLKGDSSESNVRIRDCQ 1182

Query: 61   HLINLLCLMPMGNMSSRSFSLYTTHVLELERILVNALLDNQTALCSNQFELLKLFASCRK 120
            HLI LLCLMPMGNMSS+SFSLYTTHVLELERILVNALLDNQTALCSN+FELLKLFASCRK
Sbjct: 1183 HLIKLLCLMPMGNMSSKSFSLYTTHVLELERILVNALLDNQTALCSNKFELLKLFASCRK 1242

Query: 121  ALKYIFMTYCEADNGQSSSVPILSENQFPVLWLFKSLSLVNQIQEVSPEGTDRQIKDIIF 180
            ALKYIF  YCEA NGQSSSVPILSENQFP LWLFKSLSLVNQIQEVSPEGTDRQIKDIIF
Sbjct: 1243 ALKYIFRAYCEAANGQSSSVPILSENQFPFLWLFKSLSLVNQIQEVSPEGTDRQIKDIIF 1302

Query: 181  SLMDHTLYLFLATSKYQFKEALCIIVNDNKPSKEQHQDVCQELNDGDDLCLDSIHSVEVC 240
            SLMDHTLYLFL TSKYQFKEALC  V  NKP KEQ QDVCQ+LNDGDDLCLDSIHSVEVC
Sbjct: 1303 SLMDHTLYLFLTTSKYQFKEALCTSVKVNKPCKEQPQDVCQDLNDGDDLCLDSIHSVEVC 1362

Query: 241  NSAIQMSNSLKEQVESELISLKKSNFPIGDSKNRADICKFNSLASCLNGFLCGLASV-DH 300
            +SAIQMSNSLKEQVESELISLKKSNF +GD+KNRADICKFNSLASCLNGFL GLASV DH
Sbjct: 1363 SSAIQMSNSLKEQVESELISLKKSNFAVGDAKNRADICKFNSLASCLNGFLWGLASVDDH 1422

Query: 301  TDLRNGNHRMRSMKLKREYSSELNNCINSISELLGLILEMFLDRDSQLPKNLCDYQALQD 360
            TDLR GNH MRSMKLKREYSSELNNC+N+ISELLGLILEMFLDRDSQLPKNLCDYQA QD
Sbjct: 1423 TDLRKGNHHMRSMKLKREYSSELNNCMNAISELLGLILEMFLDRDSQLPKNLCDYQAFQD 1482

Query: 361  LESSYCDDDSENVT 374
            LESSYCDDDSENV+
Sbjct: 1483 LESSYCDDDSENVS 1496

[Close]

BLAST of MELO3C020777T1 vs. NCBI nr
Match: gi|657962558|ref|XP_008372876.1| (PREDICTED: uncharacterized protein LOC103436231 [Malus domestica])

HSP 1 Score: 232.3 bits (591), Expect = 1.4e-57
Identity = 145/364 (39.84%), Postives = 208/364 (57.14%), Query Frame = 1


Query: 2    EVIATLERLTIGVCSGKRTPDDNALLAKAVNLSCDMLHTEDCKLKGDSSESNVRIRDCQH 61
            +V+  LE  ++ V S K    D + +A  V  + D L T  CK +     + ++   CQ 
Sbjct: 1151 KVLNDLENSSVVVSSNKHNIFDRSSVANPVTRASDKLLTGSCKEQNALPLTIMKFTTCQS 1210

Query: 62   LINLLCLMPMGNMSSRSFSLYTTHVLELERILVNALLDNQTALCSNQF-ELLKLFASCRK 121
            L+NLLC MP G++SSRS SLY T +L LER+LV  LLD Q AL S+ + EL +LF SCRK
Sbjct: 1211 LLNLLCHMPKGHLSSRSISLYVTSILNLERLLVGGLLDCQNALNSHHYHELFRLFVSCRK 1270

Query: 122  ALKYIFMTYCEADNG--QSSSVPILSENQFPVLWLFKSLSLVNQIQEVSPEGTDRQIKDI 181
            ALK + +  CE      Q+S   +L E+ FPV WL+KS+  V  IQE   +       D+
Sbjct: 1271 ALKCVILA-CEEKMAACQTSHASVLLEDAFPVSWLYKSVYAVLGIQESFSKDNQLPFNDM 1330

Query: 182  IFSLMDHTLYLFLATSKYQFKEALCIIVNDNKPSKEQHQDVCQELNDGD-DLCLDSIHSV 241
            I SLMDHT Y+FL +SKYQ       + +  K +K   + V +  N  + D CLD  +S+
Sbjct: 1331 ILSLMDHTFYVFLTSSKYQLNH----VDHRPKAAKLNAEIVHEHSNSSESDQCLDPSNSI 1390

Query: 242  EVCNSAIQMSNSLKEQVESELISLKKS--NFPIGDSKNRADICKFNSLASCLNGFLCGLA 301
            +   S   ++ SL EQ++S L++LK    N  +G   +  ++ KF+SL SC +G+L GL 
Sbjct: 1391 DARKSVAIIAKSLTEQMQSLLLTLKNGPYNRKVGIDVDALNLNKFSSLVSCFSGYLWGLV 1450

Query: 302  S-VDHTDLRNGNHRMRSMKLKREYSSELNNCINSISELLGLILEMFLDRDSQLPKNLCDY 359
              V+HT++RN +H   S + K E  +ELN CIN  +E   L+L+M L  D Q  + LCD 
Sbjct: 1451 CVVNHTNVRNSDHEANSSRRKLESITELNLCINVFAEFSSLLLQMLLFDDKQQSRTLCDA 1509

[Close]

BLAST of MELO3C020777T1 vs. NCBI nr
Match: gi|595795001|ref|XP_007200948.1| (hypothetical protein PRUPE_ppa000049mg [Prunus persica])

HSP 1 Score: 231.1 bits (588), Expect = 3.2e-57
Identity = 143/365 (39.18%), Postives = 210/365 (57.53%), Query Frame = 1


Query: 2    EVIATLERLTIGVCSGKRTPDDNALLAKAVNLSCDMLHTEDCKLKGDSSESNVRIRDCQH 61
            +V+ +LE  ++ V        D +  A  V  S D L     K + D   + ++   CQ 
Sbjct: 1169 KVLNSLENSSVVVSCKNHYIFDCSSAASPVTHSSDELRKGSFKEQKDLQSTIMKFIACQS 1228

Query: 62   LINLLCLMPMGNMSSRSFSLYTTHVLELERILVNALLDNQTALCSNQF-ELLKLFASCRK 121
            L+NLLC MP  + +SR+FSLY T +L LER++V  LLD Q AL S+ + EL +LF SCRK
Sbjct: 1229 LLNLLCCMPKSHFNSRAFSLYVTSILNLERLVVGGLLDYQNALYSHHYHELFRLFVSCRK 1288

Query: 122  ALKYIFMTYCEAD--NGQSSSVPILSENQFPVLWLFKSLSLVNQIQEVSPEGTDRQIKDI 181
            ALKYI +  CE    + Q+S   +  E+ FP+LWL+KS+  V  ++E  P+   R + D+
Sbjct: 1289 ALKYIILA-CEGKTADSQTSHTLVFFEDSFPILWLYKSVYAVVGLEESLPKDNCRPVSDM 1348

Query: 182  IFSLMDHTLYLFLATSKYQFKEALCI--IVNDNKPSKEQHQDVCQELNDGDDLCLDSIHS 241
            I SLMDHT Y+FL  SKYQ   A+    +   N     +H  + +      D+CLDS   
Sbjct: 1349 ILSLMDHTFYVFLTLSKYQSNHAVHFSKVAELNAGLVHEHSSLSE-----SDMCLDSSDY 1408

Query: 242  VEVCNSAIQMSNSLKEQVESELISLKKS--NFPIGDSKNRADICKFNSLASCLNGFLCGL 301
            +E   S   ++ SLKEQ++S L++LK +  N  +G   +  ++ KF+SL SC++GFL GL
Sbjct: 1409 IEAWKSVTIIAKSLKEQMQSLLVNLKDALCNGKVGIGVDGLNLNKFSSLISCISGFLWGL 1468

Query: 302  AS-VDHTDLRNGNHRMRSMKLKREYSSELNNCINSISELLGLILEMFLDRDSQLPKNLCD 359
            A  V+HTD R+ +H++ S + K E  SEL+ CI+  +E   L+L M +   SQ  + LCD
Sbjct: 1469 ACFVNHTDSRSSDHKVNSSRQKLEPISELHLCIDVFAEFCSLLLPMLVCDSSQQSRTLCD 1527

[Close]

BLAST of MELO3C020777T1 vs. NCBI nr
Match: gi|645261284|ref|XP_008236220.1| (PREDICTED: uncharacterized protein LOC103335010 [Prunus mume])

HSP 1 Score: 223.4 bits (568), Expect = 6.6e-55
Identity = 141/365 (38.63%), Postives = 207/365 (56.71%), Query Frame = 1


Query: 2    EVIATLERLTIGVCSGKRTPDDNALLAKAVNLSCDMLHTEDCKLKGDSSESNVRIRDCQH 61
            +V+ +LE  ++ V        D +  A  V  S D L     K + D   + ++   CQ 
Sbjct: 1169 KVLNSLENSSVVVSCKNDYIFDCSSAASLVTHSSDELRKGSFKEQKDPQLTIMKFIACQS 1228

Query: 62   LINLLCLMPMGNMSSRSFSLYTTHVLELERILVNALLDNQTALCSNQF-ELLKLFASCRK 121
            L+NLLC MP  + +S +FSLY T +L LER++V  LLD Q AL S+ + EL +LF SCRK
Sbjct: 1229 LLNLLCCMPKSHFNSTAFSLYVTSILNLERLVVGGLLDYQNALYSHHYHELFRLFVSCRK 1288

Query: 122  ALKYIFMTYCEAD--NGQSSSVPILSENQFPVLWLFKSLSLVNQIQEVSPEGTDRQIKDI 181
            ALKYI +  CE    + Q+S   +  E+ FP+LWL+KS+  V  ++E  P+   R + D+
Sbjct: 1289 ALKYIILA-CEEKTADSQTSHTLVFFEDSFPILWLYKSVYAVVGLEESLPKDNCRPVSDM 1348

Query: 182  IFSLMDHTLYLFLATSKYQFKEALCI--IVNDNKPSKEQHQDVCQELNDGDDLCLDSIHS 241
            I SLMDHT Y+FL  SKYQ   A+    +   N     +H  + +      D CLDS   
Sbjct: 1349 ILSLMDHTFYVFLTLSKYQSNHAVHFSKVAELNAGLVHEHSSLSE-----SDTCLDSSDY 1408

Query: 242  VEVCNSAIQMSNSLKEQVESELISLKKS--NFPIGDSKNRADICKFNSLASCLNGFLCGL 301
            +E   S   ++ SLKEQ++S L++LK +  N  +G   +  ++ KF+SL SC++GFL GL
Sbjct: 1409 IEAWKSVTIIARSLKEQMQSSLVNLKDALCNGKVGIGVDGLNLNKFSSLISCISGFLWGL 1468

Query: 302  AS-VDHTDLRNGNHRMRSMKLKREYSSELNNCINSISELLGLILEMFLDRDSQLPKNLCD 359
            A  V+HT  R+ +H++ S + K E  SEL+ CI+  +E   L+L M +   SQ  + LCD
Sbjct: 1469 ACFVNHTYSRSSDHKVNSSRQKLEPISELHLCIDVFAEFCSLLLPMLVCDSSQQSRTLCD 1527

The following BLAST results are available for this feature:

BLAST of MELO3C020777T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM80_CUCSA	2.2e-190	90.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G263870 PE=4 SV=1	[more]
M5VLU9_PRUPE	2.2e-57	39.18	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000049mg PE=4 SV=1	[more]
B9H146_POPTR	5.8e-50	38.37	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s17490g PE=4 SV=2	[more]
F6I148_VITVI	4.9e-49	40.65	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g01490 PE=4 SV=...	[more]
A0A061DYK2_THECC	2.7e-47	36.93	Urb2/Npa2, putative isoform 1 OS=Theobroma cacao GN=TCM_006698 PE=4 SV=1	[more]

BLAST of MELO3C020777T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G30150.1	1.4e-26	30.98	Nucleolar 27S pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849)	[more]

BLAST of MELO3C020777T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115616\|ref\|XP_008457645.1\|	1.0e-212	100.00	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103497293 [Cucumis me...	[more]
gi\|778669621\|ref\|XP_011649280.1\|	3.2e-190	90.64	PREDICTED: uncharacterized protein LOC101208263 [Cucumis sativus]	[more]
gi\|657962558\|ref\|XP_008372876.1\|	1.4e-57	39.84	PREDICTED: uncharacterized protein LOC103436231 [Malus domestica]	[more]
gi\|595795001\|ref\|XP_007200948.1\|	3.2e-57	39.18	hypothetical protein PRUPE_ppa000049mg [Prunus persica]	[more]
gi\|645261284\|ref\|XP_008236220.1\|	6.6e-55	38.63	PREDICTED: uncharacterized protein LOC103335010 [Prunus mume]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C020777	MELO3C020777	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C020777T1	MELO3C020777T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C020777T1.cds2	MELO3C020777T1.cds2	CDS
MELO3C020777T1.cds1	MELO3C020777T1.cds1	CDS