MELO3C015565T2 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C015565T2
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSpc97 / Spc98 family of spindle pole body (SBP) component
Locationchr2 : 2909963 .. 2915847 (-)
Sequence length1047
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTCATTATATTCTACGAAAGTGTTGAATTTCGTAGTTCTCCCTCTCTCTCGCAAAATCGCTCAAAATCCCGTCGTCGAAACGATCCTCCGGCTCCCACTGTCGATACAATCCTCCAGCCGCCGCTGTCGAAAGAATTCTCCAGCCAACGCCGTTGAAATTCGGGACGTCGCAACGCCGTCGGAATCAAGTTCGCGCCATCTCTGTTCGTCGTCTTCCGCCGTCCAGTGCTTCTCCTTGCTCCCTCCTCTGTCCGGTTCGTTCTCCGTTCATTCCTATAGTGCTCGTTTTTGCTGGTTATTTCGTTTTCTTGCTTCCGTGTTCTAATGTTGGAATTTGACACGTAAATTTAAAATTAACTTTTGAGTTTGATTGTGGTTTACTGAATAGCATTTCATTAGGGTTTTGTATCATAAACGTGAAGAAGATTACTTGTTGTTGCGAGTTATGAGCGAACGAGGAAGAGATTTTGAGTGAATGTTAGGATTTTGAGTATATGTTAGGATTTTGAATATATGTTAGGATGGAAAGGGTGAGAACAGAGGGAACGAGAACTTGAGCGAGGTGTCTGCAATTAGTAAGTAAAATTTCTCCATTACCACTGGTGCAAATTTCAAACAAAGGGGATATCTTGAGACACCAGAGTAGGAACACTTGTGGCACATGCTCTACGTGACTGATGAGCCCGAGACCACAAAAGAGAATTGAAAAAGAAAAACATCACCCATGGATGACAACAACTTTCACCACCAATCAATAAAATGAGGCTGGATTCAAGATGTATGCCTATGGATTCAACACCCTGATCCCAAATCGAAGATACCAAACAAAGGGACACAGAAATCATTGTCCATGAGATTGTAGAAACTCCACACTGAAAATTTCTATTAAAAACACAGGAATCTACAGTTTGTACAATCATTTGCACAAGCATCTTCAAAACATAAATCAAAAAATGATTCACACTAGAACGTGAATTAAGAATTTAAGAGGACAAGTTTGAAGCACACTGCCTTCGGCATTGAATCAATGTCTTCTTCTTGGACCATTGGAAAGCAACAAACCGTAAATTCTAGTTGCACTTTTTTACTTGAACCTTTTGAGTTGATTGTTGAACTTTAGGCCCCTATGGTGTTTTACTAATTTTGAAGATCTAAGTTGAAGTTTCTTCATTTGGTAACTGCTCTCGTCTTTTACTCTTTGTCAAATGGTAACAACTCCTTATTCACGTATGGATTAAAGTATATAGATCAAGTTGACCATCGTGCTTATCCTTTGGCCGACAGGTCCAATGCCAATTCAAATAAAAGGTTTAAGTCATGGTGACTACATACTTGGTATTTAATATTATAAAGAGTAACTATGATAATATGATAAGGTTCAATAGATATATGGAAGAAATTATAGGTCTAGCCATACCATTATAGTATAGGTCAGGCTTACACTCTACTACTGATAGGTTTGTCTACTATTGTGGTACTTCAAAATGGTCCCATTAGACATTAATAAATGTTAAATTTGGTCTGAAATCTGGTCTGGTTTGAATTTATTAACTATGGTCTTTCTGGTGGTAGTTCATATTTATGACGATTGTAATATTGGTCACCAGGTTGAGATTATGCTGGATGGTTTGATATCGACTTGTTTTGCCGACATCTATTGCAGTCATGTCTGTTTTCTTCTTTTCCTTATAGCTTGGTAAAAACTTGGATAAATTCCTCTTGCATTATCATCTAGGCACAGTTGGGGGTGGCGTTTTGGTTAATCTGGTTTAGCCTTTGAACTGTTATGTGTTTGGTTTGATTTGTTTGTAAGTTGAACTTTTCAATTTAGCATTTGAAATTCTATGTATATTTATAGGCAAAAAATTTAATTTACTCAATTTTGTGCAGATGATTAATTAAGTAAAAATAACTAGAAATAAGTTGTAAAATGGGTAATCCAGTACGTAAAGGGTACTAAGAACTATGGTTAAATATGGATAGATAGTGATTATGAAATTCAATGTTAATAAAGTTTTGTTGACTTGATTTTACCTTTTGATTTAGATAAGAGAAGATCTATATCTGTCTTTTAACAAACCTTTTAGAAAGGAGTATAATTAAGTGGTCTTCTAGTGTTGCATTCTTTTGTTTGAATGATTTTGATGTGTTCATTATTATGCTTATTCATGCATTGACTATTATAGTCAAGTTCAACTTTATTCTCATATAGTTTTAAGGAAAAAAAAATTATCATTCCCATCTAGTTCAGTTCAATGTAGTTTATCACATTCCAAGAGATTTAGTTAAACACTTGTCCTTAACATATCAAATATTGTCTGCTTAGAGAACGTCCAGGCTTTTAACTTGGAGTTTGCACTTTAGTTACTCTAAGTTGTTTATTTCATGCGGGGTGAATTGAGCTTAGTTGGAATTCTTACCGTGCATTTAGACTATCTTTCTTCACTTTTCCATTCAAGCTGTAATTAGTTAAGATTGTTCCAATTCCTCATATCTTCCTTTTTCTCCCTTGCTACATCTTCCATGGGGTTTTCTTTTCAAAATTTATAGAAACCCCCCCACCCCCCAAAAAACAAAAGCTGCTCAATATAGAACCTAAGTATCTTGTGCGTTTCTGCTGCAAACAAGTTTGACTAAAGCCTAACTTCTTAGATATTTGAATTCGAAATCGTCTAATGGACAAATTATGGATGATGGAGAAGAGAGTGTCTACGGAGTATGAATTGGGAGTGGAAGCGTCCATTCAATTTGGTTTTCGTGATGGCAAAGGTTCCGGTACTATTAGGTGTCCATGTTTGAAATCTGGGAATCATTTGTCGCTCCACTGCCGCTGGTGATAAGCTCTTGAGTTCTTGAACCAGGCCCTAATGATGAATTTTAGCTTCTATTTTGTTGTAAATTAATCTCTTCGTTTCAAGATCATCGATATATTACTCAAGGACTAATTTTGTTTGGGTAATTTATGCTAGCGGTCACGGACTAATTTTGGCATATTAACCTTGGAATCTTCCTTACATTGGCATGTAATGGATAGGTCAAACAAAGTTGTGTGAGCGGTTTTTGGTCAATGTGATCATGTTCTACATGTAATAACCTATAAGGGTAGTGACAAGATGTTTATGTTATGGAAATCGTGTTAGTTTGAGCTTACACATCTACTTTGTTGAGTTTTTACTTTCATTGTTGGTCTATTTCACAGTTTGAAGTTAGAGTTAGCTTTGATTTTTCCTTTAGGTTTGTTTACTCAAACTATTTTAGCTTTGTTTGTGTATTAATTTTTTTCTTTTTCTTTTTTACTTTTGGAAGATCAGTGAAAGTTGATGCTTGTTGTGACAGTTTAATAATTTGACTTTGAAGTCTTTTCTGGAGTAATATTGCGGAAGATTTCTATGGAAGAGGCGAATGAAATTTTGAAGAATAACAGAGTTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGTAAGTTCATTTGGAATCAGAGTTTCTTTCTCGTTATTTCAATAATGTTTGCATTTGTCATTGATTTATTGAATCCCTTTGCCTACGTGCTAACTTGCTTATAATCCGAGCATTCTTCTTGTTGATGTTGTATACCTACAATGTTTCTTGTTCTTTTTTTTCTTTCTTGGAAACGATTAATATCTTCTACTTGACCTTGATTGATAACAATGGACGATGAAAGTACAGACATTGTGAGCTGTGTGGGCTTTTCTTCTTATTTTGATTTATGAGAACTTTTTACCATCATTTTCCGAACAAATTGACACAGTATTATGGTGTATGTGGCAGGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAAAAATTTGATTTGAAGACGCTACGTGCTATTGGTAGGTTGCATTTATTCCAATTGTATTACCTCTATTTATGCCTTTTGTCTATTAAGTTGTTAGTTTAAGCATAGCTAGGTGGACAAGACACCCATTGTCATCTCAAAAGTCAACAATTCAATTCCTCACCCACCCTATTGAGCTAAAACAAAAATATGAGTCTTGCTCCACTATTTTGGTGCTATCTACTATATTAGTTGCTGAACCAATTACCATTCAATCCAAAGGTTGATATGTTTGATCTCCCACTCTAACACCGTTGAACTAGGGAAAATAATTGTCTAGAAAATAGGTGTAAATTCTCTTTCTGGCATCATTGTCATACAGCCACTGCGTTAGTTATTTTCCATATTAGTTGCTGAACTAATTTTGTATTTGTGGCGCTATAAATGAAGGGTTTGTTTTGATGGAACATCTTAAAGGAGAACTTAGGACATCAGATGTTTCGGATCTTTCTCAATCTGCTACCTTAAATGCGTGCAACTTGTTAGACAGCAATGTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATCTGCTCAGACAGAAGGAAGAAACCAGGAAAAAGGTTGGTACGATTTACAAGTTGTTGGGTTTGTATTGTTCAAGAGCACATTTTGGAAAAAATAGTGAAATGTCATGTTAATTATTGCTTTGTTATCTTAATACTTCATATTAACAGGGGAAAAAAACTTTTGACAACTACATTAACCTTTTGGTATTCGTAAGGCCTTCTATTCATATTAATTTTCATCGTGCATTGGATAGATAAGTAGTAGATCAGTTTGATCATGTCTGTTCCTAATATTTTTGCTCCGTCCTCTGGAGTGGTTGTTGTTTCCATTGCGTTTTCTTATTTAGGTGTTTAGAATCACGTTGGGAAGATGTGAGGCCTCATGATCATTATATGATACACGAGTTACTTCTCTCGTATGCAATTAGCATAGAGATGGAGATATTCATGTTTATCCTATATGATATTAAATATATGAAGTCCCCTCGGGTATTTGTTCCAAAAAGAAAAAAGAAAAATTTGACCCAAGATAGATGAACCCAAAGAGATCTTGAGAGAGAGGAGGTATGCTGAGGATCTTGCATCAGAAAAACTTACCATCATACATGAGTTACTCCGCTCATTATCAACTTATTTTTATAGGAAGTACTAAGAAGTACTTACTTTCTCACCCCTACATTCTCTTGTTTTCTGCCTTCCTCAAGTGATCGGATTCATTCTGTTCTATTTACAATCGTAGATTTACTAATTCATTTGAGACATAGTCTCAGTAAATAATGATTAAGAGGTCAAAGGTTCAATCTGTGGTGGTTACCTACGTAGAAATTATTTTATTACGAGTTTTCTCGACACTCAAATATTGTAAGGTTTGGTAGGTTGTCCTGTGAGATTAGTTGTCGTGTGCATAAGCTATGATTGACACTCATGGATATAAAAAAAACACATGGTATCATTTGAATTGAACCTAATTATAATTTCATGTATGGATTCTAATGTTCTTAATTACTTGCACATTGTGCTTTAGTTTAATGCTGTGCTTCTCAATTTGCATTCCCAACATTTGAACTCATACTCTTTCTCTTGTCTTCTTTTCCCTCTCTCCCCTCTCTTTCTAGGCCACGTAAAAATTAGGTTGATTCGAGATACAAGAACGAGAAGTCGTGAATTAGAAAAGACTAGAAGTTCATGGAAGTTGTCTTTGCCAACATGTCGGCATCATGCAGCTTCCCACACTGCAAGACTTGGCAGGAATCATTCTAACAACCATGGTCGTCGCAAACATTTTTGTTAGTTATAGATATAATAGTGTAGGCAGCGAAAGGAACATATATATTAATGGTTCGAGCTATATCAGATGATAGAGAAAATTTTGTAGTTCTCCGAACGAAGAATGTGAGAATTTTGTTAAATTACAAGTTTAGTTTTTATTTGTCTATTTGGTAAAATATAGTCTAGTCTTTG

mRNA sequence

GTGTCATTATATTCTACGAAAGTGTTGAATTTCGTAGTTCTCCCTCTCTCTCGCAAAATCGCTCAAAATCCCGTCGTCGAAACGATCCTCCGGCTCCCACTGTCGATACAATCCTCCAGCCGCCGCTGTCGAAAGAATTCTCCAGCCAACGCCGTTGAAATTCGGGACGTCGCAACGCCGTCGGAATCAAGTTCGCGCCATCTCTGTTCGTCGTCTTCCGCCGTCCAGTGCTTCTCCTTGCTCCCTCCTCTGTCCGATCAGTGAAAGTTGATGCTTGTTGTGACAGTTTAATAATTTGACTTTGAAGTCTTTTCTGGAGTAATATTGCGGAAGATTTCTATGGAAGAGGCGAATGAAATTTTGAAGAATAACAGAGTTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAAAAATTTGATTTGAAGACGCTACGTGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAGAACTTAGGACATCAGATGTTTCGGATCTTTCTCAATCTGCTACCTTAAATGCGTGCAACTTGTTAGACAGCAATGTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATCTGCTCAGACAGAAGGAAGAAACCAGGAAAAAGGCCACGTAAAAATTAGGTTGATTCGAGATACAAGAACGAGAAGTCGTGAATTAGAAAAGACTAGAAGTTCATGGAAGTTGTCTTTGCCAACATGTCGGCATCATGCAGCTTCCCACACTGCAAGACTTGGCAGGAATCATTCTAACAACCATGGTCGTCGCAAACATTTTTGTTAGTTATAGATATAATAGTGTAGGCAGCGAAAGGAACATATATATTAATGGTTCGAGCTATATCAGATGATAGAGAAAATTTTGTAGTTCTCCGAACGAAGAATGTGAGAATTTTGTTAAATTACAAGTTTAGTTTTTATTTGTCTATTTGGTAAAATATAGTCTAGTCTTTG

Coding sequence (CDS)

ATGGAAGAGGCGAATGAAATTTTGAAGAATAACAGAGTTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAAAAATTTGATTTGAAGACGCTACGTGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAGAACTTAGGACATCAGATGTTTCGGATCTTTCTCAATCTGCTACCTTAAATGCGTGCAACTTGTTAGACAGCAATGTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATCTGCTCAGACAGAAGGAAGAAACCAGGAAAAAGGCCACGTAAAAATTAG

Protein sequence

MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGKRLVRFTSCWVCIVQEHILEKIVKCHVNYCFVILILHINRGKKLLTTTLTFWYS*
Homology
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BLAST of MELO3C015565T2 vs. TrEMBL
Match: A0A0A0LBP9_CUCSA (Gamma-tubulin complex component OS=Cucumis sativus GN=Csa_3G633280 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.2e-53
Identity = 113/121 (93.39%), Postives = 117/121 (96.69%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           MEEANEILKN R+E ISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLRA
Sbjct: 59  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRA 118

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKG+LRTSDVSDLSQS T NACNLLDSN+EKILSIDEIMASICSDRRKKPGK
Sbjct: 119 IGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 178

Query: 121 R 122
           R
Sbjct: 179 R 178

[Close]
BLAST of MELO3C015565T2 vs. TrEMBL
Match: A0A0A0KW48_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166940 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.6e-53
Identity = 113/121 (93.39%), Postives = 116/121 (95.87%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           MEEANEILKN R+E ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  RA
Sbjct: 180 MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 239

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKGELRTSDVSDLSQSA LNACNLLDSN+EKILSIDEIMASICSDRRKKPGK
Sbjct: 240 IGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 299

Query: 121 R 122
           R
Sbjct: 300 R 299

[Close]
BLAST of MELO3C015565T2 vs. TrEMBL
Match: M1BX27_SOLTU (Gamma-tubulin complex component OS=Solanum tuberosum GN=PGSC0003DMG400021318 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.5e-28
Identity = 68/124 (54.84%), Postives = 97/124 (78.23%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           M+E   IL NNR+ED+ WLCSL+ESELDLLI +K+L+ QRAK IGH++LA KFDLKTLRA
Sbjct: 1   MKEQMAILGNNRIEDVWWLCSLTESELDLLIGLKVLIQQRAKKIGHKSLANKFDLKTLRA 60

Query: 61  IGFVLMEHLKGELR----TSDVSDLSQSATLNACNLLDSNVEKI---LSIDEIMASICSD 118
           + FVLME+LKG+LR    T D ++   S+TL+ACNLL+ +++K    + ++++ + IC+D
Sbjct: 61  LSFVLMENLKGKLRDLSGTPDTAE--SSSTLDACNLLNYDLDKTFANMGVEQLSSYICND 120

[Close]
BLAST of MELO3C015565T2 vs. TrEMBL
Match: A0A0V0HHC0_SOLCH (Gamma-tubulin complex component OS=Solanum chacoense PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-27
Identity = 67/124 (54.03%), Postives = 97/124 (78.23%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           M+E   IL NNR+ED+ WLCSL+ESELDLLI +K+L+ QRAK IGH++LA KFDLKTLRA
Sbjct: 1   MKEQMAILGNNRIEDVRWLCSLTESELDLLIGLKVLIQQRAKKIGHKSLANKFDLKTLRA 60

Query: 61  IGFVLMEHLKGELR----TSDVSDLSQSATLNACNLLDSNVEKI---LSIDEIMASICSD 118
           + FVLME+LKG+LR    T D ++   S++L+ACNLL+ +++K    + ++++ + IC+D
Sbjct: 61  LSFVLMENLKGKLRDLSGTPDTAE--SSSSLDACNLLNYDLDKTFANMGVEQLSSYICND 120

[Close]
BLAST of MELO3C015565T2 vs. TrEMBL
Match: K4AST4_SOLLC (Gamma-tubulin complex component OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.2e-27
Identity = 68/122 (55.74%), Postives = 95/122 (77.87%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           M+E   IL NNR+ED+ WLCSL+ESELDLLI +K+L+ QRAK IGH++LA KFDLKTLRA
Sbjct: 1   MKEQMAILGNNRIEDVRWLCSLTESELDLLIGLKVLIQQRAKKIGHKSLANKFDLKTLRA 60

Query: 61  IGFVLMEHLKGELR-TSDVSDLSQ-SATLNACNLLDSNVEKI---LSIDEIMASICSDRR 118
           + FVLME+LKG+LR  S   D ++ S+TL+ACNLL+   +K    + ++++ + IC+D+R
Sbjct: 61  LSFVLMENLKGKLRDLSGTPDTAEFSSTLDACNLLNYVRDKTFANMGVEQLSSYICNDKR 120

[Close]
BLAST of MELO3C015565T2 vs. TAIR10
Match: AT1G80245.1 (AT1G80245.1 Spc97 / Spc98 family of spindle pole body (SBP) component)

HSP 1 Score: 125.9 bits (315), Expect = 2.4e-29
Identity = 62/124 (50.00%), Postives = 85/124 (68.55%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           MEE  +ILKNNR +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFVLMEHLKGELRTSD---VSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKK 120
           +G VLMEH +  ++       S + Q   L+ CNLL ++V+  + I+EI+  IC ++ KK
Sbjct: 61  LGLVLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKSKK 120

Query: 121 PGKR 122
             ++
Sbjct: 121 KARK 124

[Close]
BLAST of MELO3C015565T2 vs. TAIR10
Match: AT4G00695.3 (AT4G00695.3 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 115.5 bits (288), Expect = 3.2e-26
Identity = 63/128 (49.22%), Postives = 89/128 (69.53%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENL-AEKFDLKTLR 60
           MEE ++ILKNNR +D++W CSLSESELDLLIS+K LV++RAK  G E+L A+KFDLK LR
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 61  AIGFVLMEHLKGELRTSDVSDLSQS-----ATLNACNLLDSNVEKILSIDEIMASICSDR 120
           ++G VLME+++   R  D + L+ S     + L++CNLL ++V+  + I+EI+  IC+  
Sbjct: 61  SLGLVLMEYVR--KRVEDDTSLAPSVVQELSLLDSCNLLKTHVDDTVDIEEILTDICNKN 120

Query: 121 RKKPGKRL 123
               G R+
Sbjct: 121 WATKGTRV 126

[Close]
BLAST of MELO3C015565T2 vs. NCBI nr
Match: gi|778682178|ref|XP_011651660.1| (PREDICTED: uncharacterized protein LOC101210446 isoform X1 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 1.5e-73
Identity = 146/161 (90.68%), Postives = 152/161 (94.41%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           MEEANEILKN R+E ISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLRA
Sbjct: 1   MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRA 60

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKG+LRTSDVSDLSQS T NACNLLDSN+EKILSIDEIMASICSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 120

Query: 121 RLVRFTSCWVCIVQEHILEKIVKCHVNYCFVILILHINRGK 162
           RLV FTS  VCIVQ+HILE+IVKCHVNYCFVILI HINR K
Sbjct: 121 RLVPFTSSCVCIVQDHILERIVKCHVNYCFVILIFHINRKK 160

[Close]
BLAST of MELO3C015565T2 vs. NCBI nr
Match: gi|659100239|ref|XP_008450997.1| (PREDICTED: uncharacterized protein LOC103492413 [Cucumis melo])

HSP 1 Score: 234.6 bits (597), Expect = 1.3e-58
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA
Sbjct: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120

Query: 121 R 122
           R
Sbjct: 121 R 121

[Close]
BLAST of MELO3C015565T2 vs. NCBI nr
Match: gi|700203241|gb|KGN58374.1| (hypothetical protein Csa_3G633280 [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 1.7e-53
Identity = 113/121 (93.39%), Postives = 117/121 (96.69%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           MEEANEILKN R+E ISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLRA
Sbjct: 59  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRA 118

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKG+LRTSDVSDLSQS T NACNLLDSN+EKILSIDEIMASICSDRRKKPGK
Sbjct: 119 IGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 178

Query: 121 R 122
           R
Sbjct: 179 R 178

[Close]
BLAST of MELO3C015565T2 vs. NCBI nr
Match: gi|778682197|ref|XP_011651668.1| (PREDICTED: uncharacterized protein LOC101210446 isoform X2 [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 1.7e-53
Identity = 113/121 (93.39%), Postives = 117/121 (96.69%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           MEEANEILKN R+E ISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLRA
Sbjct: 1   MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRA 60

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKG+LRTSDVSDLSQS T NACNLLDSN+EKILSIDEIMASICSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 120

Query: 121 R 122
           R
Sbjct: 121 R 120

[Close]
BLAST of MELO3C015565T2 vs. NCBI nr
Match: gi|700198692|gb|KGN53850.1| (hypothetical protein Csa_4G166940 [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 3.8e-53
Identity = 113/121 (93.39%), Postives = 116/121 (95.87%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           MEEANEILKN R+E ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  RA
Sbjct: 180 MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 239

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKGELRTSDVSDLSQSA LNACNLLDSN+EKILSIDEIMASICSDRRKKPGK
Sbjct: 240 IGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 299

Query: 121 R 122
           R
Sbjct: 300 R 299

The following BLAST results are available for this feature:
BLAST of MELO3C015565T2 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBP9_CUCSA1.2e-5393.39Gamma-tubulin complex component OS=Cucumis sativus GN=Csa_3G633280 PE=3 SV=1[more]
A0A0A0KW48_CUCSA2.6e-5393.39Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166940 PE=4 SV=1[more]
M1BX27_SOLTU6.5e-2854.84Gamma-tubulin complex component OS=Solanum tuberosum GN=PGSC0003DMG400021318 PE=... [more]
A0A0V0HHC0_SOLCH1.1e-2754.03Gamma-tubulin complex component OS=Solanum chacoense PE=3 SV=1[more]
K4AST4_SOLLC3.2e-2755.74Gamma-tubulin complex component OS=Solanum lycopersicum PE=3 SV=1[more]
BLAST of MELO3C015565T2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80245.12.4e-2950.00 Spc97 / Spc98 family of spindle pole body (SBP) component[more]
AT4G00695.33.2e-2649.22 FUNCTIONS IN: molecular_function unknown[more]
BLAST of MELO3C015565T2 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778682178|ref|XP_011651660.1|1.5e-7390.68PREDICTED: uncharacterized protein LOC101210446 isoform X1 [Cucumis sativus][more]
gi|659100239|ref|XP_008450997.1|1.3e-58100.00PREDICTED: uncharacterized protein LOC103492413 [Cucumis melo][more]
gi|700203241|gb|KGN58374.1|1.7e-5393.39hypothetical protein Csa_3G633280 [Cucumis sativus][more]
gi|778682197|ref|XP_011651668.1|1.7e-5393.39PREDICTED: uncharacterized protein LOC101210446 isoform X2 [Cucumis sativus][more]
gi|700198692|gb|KGN53850.1|3.8e-5393.39hypothetical protein Csa_4G166940 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR007259GCP
Vocabulary: Biological Process
TermDefinition
GO:0000226microtubule cytoskeleton organization
GO:0007020microtubule nucleation
Vocabulary: Cellular Component
TermDefinition
GO:0000922spindle pole
GO:0005815microtubule organizing center
Vocabulary: Molecular Function
TermDefinition
GO:0043015gamma-tubulin binding
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0007020 microtubule nucleation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005815 microtubule organizing center
cellular_component GO:0000922 spindle pole
cellular_component GO:0005840 ribosome
cellular_component GO:0045298 tubulin complex
molecular_function GO:0043015 gamma-tubulin binding
molecular_function GO:0003735 structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C015565MELO3C015565gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C015565T2MELO3C015565T2-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C015565T2.cds4MELO3C015565T2.cds4CDS
MELO3C015565T2.cds3MELO3C015565T2.cds3CDS
MELO3C015565T2.cds2MELO3C015565T2.cds2CDS
MELO3C015565T2.cds1MELO3C015565T2.cds1CDS


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007259Gamma-tubulin complex component proteinPANTHERPTHR19302GAMMA TUBULIN COMPLEX PROTEINcoord: 26..116
score: 1.4
NoneNo IPR availablePANTHERPTHR19302:SF39SUBFAMILY NOT NAMEDcoord: 26..116
score: 1.4