Cucsa.331880.2 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTTCCCTCTCCGCTCTTTCTCTCTCTAAACTAAATCGGAGTTTAGAGAGAGAAACGTCCGGCGCCACATTGGATCGCCTGAAGAAGAAAACTAAGATCGATTGTATAGGAAGGAAGGATGGGGATGAAGAGATTTGCGTTGCTTCTTTGCGCAGAAGATTCGGAATACGTTAAAATGAAATACGGAGGATACTTCGGAGTGTTCGTCAGAATGTTGGGCGAAGAAGGCGAGGCTTGGGATCGTTTCCGTGTGGCTGCCGGTGAGTTTCCTGCAGATGATCAGATAGCCGACTACGACGGATTTGTGATTTCGGGTAGCTGCAACGACGCTCACGGCGACGATCCTTGGATCTGCCGATTGATCGCTTTGTTGCAGAGATTGGCGTCCTTGAACAAGCGAATTCTCGGCATTTGCTTCGGCCATCAGGTATTTTTCTAATTTCCCTTTTTTTTTTTCTTGAGTTAATGGGAAAAGCACTCTAAATTTTTTGTCTAATTTTCTTTTGGTTTTCAAAACGTTAGTTAATTAATTTTGATTCTTAGAAGCAGTTGTGCTCTTTACTCGGTTTCAAAATGTTATAGTTTCATTTTGAGGGTTAGAATTTAGTTTTTATCCTGTCATTGAAATATTAGTGAAGGCAATTTAATTCAATTTTTTTTCTAAAATTCATCGATATACATGAACACCTAAATCTCGAGATTTAACCAAATTCAAGATTTTCTCCTCCAAATTTTCTTTGTTTGTAATTTAAAAAATCAAATCAAAATTTGAAAACTAGAAGAATAATTTTTAAAACGATTTTATTTTGAGAATTTCCATTACATGGAAGCAATGCGCAAATAATGGTAAGAGACGCAGAAGAGATATACCAACTTTTCATAAAGAAATCAAAAAATGGAATTGTATCAGATGAGCCTTAAATTTCTTTAACATTTTTAATCAATTATTGTGGTCATTTTAAATTTTCAACATAATAGTTTAGATTAAGACGGAGATTATTTTAAATAAAATATTGTGGTATTAATTAGATTTACATCTAAATTATTCGTTTATGGATAGCTGTACTTTTTAAAATAAAATATTGTGGTATTAATTTTTTAAAAAAAGATTAAAATAAATCTTAATTTTAAATACATAATACCAATTTAATAATTGTTAGGTTTGTTGGTTGATAACTTTATTTACTTTTTATCTGAAATTTGTGAATTTTTTAAGAGGAAAATTTACCTTTTTAAGAATTTAAATATATATGTTTTCATTAACTTGTAGCTATTATATGAAGGTATATTTTCACAATTCATAGATCAAGGACTGAAAATGTGTTTTGATAACTCATGACTAAGAATGTATTTTTTCCTCTATTTATTTGATTTATTCTATATAAAACTATACATTTTAACGAATGAAGGACCTTTGACCTTCTAGTTCAACTCTAATTTACTAATATAAACTAACTTTATCTATTCTCAATTAATATTCTTTACATTTACCTCGCATGTTAGAGAATGATTTTACTTGTCAACGTTCTTAAAAAAGAATGTATCATTTACCATTCTTTTATTTTATTCCGATTATATCATTCAATCTTTAACAAAGTCAAATCTATAAATATTGTTAAAATTATTCGTAGAATCTCATGTTGAAAATACAATTTGTCTTGAGTTTTGAGTATAGCTATACTTTTCGGATTTCATCAATACTTAACTTTATATTTTAAATTAAATTCTTTTATATGATCTATAAATTTCAATATTTTGTTCTTTTACTAACTTTAACTTTGTTCCTTGACCACAATTTTAAGTTAATTAACTAAAATAATTCTTTATGAAACAAAATTGAAAAGTGTAAAATGTAAAATAGAACAAATGAAAATGAAAATATAAGAAGAGGTAAAAATTAGAAATTAGAAATACCAAATAGGAATTAAATTTAAAAGGAAAGAAAGAAAATGTAATTTATGCATAAATGTACTTCGTCACTAATTTTAGAAGAAAGAAAACTTGAAAAAGAAAACAAAAATCGTAAAAAAACAAGAGCACAATTACGCGAGACTATTTTGGCTGGTAGCACGTGATTTCATTAATCTGGTGTTTATGATATGTCTGTTCGAGATTTTCTCATTTAGCATAATGACAGAAAGAGAAAATTGTAAAACACAACTTATAGATTAAAATCTAAAAAAGCAAAAATATTTTATCACGAAATAAAATAAAAAAGTCAATTTCAAAGTATAGTAAAAGAACATATAAACATTTAAACGATTTCGTCATTTCCACTAATTTTTGAAAGAAAACACTATTTTAATTTTTCTAAAAAATGTATATTAATCCAATTTCTATAAATTATCTTTTAACTTTATATATATAAAAGAAAACCAACACAATTTTAGAGAGGTAAGATTTGAACCATCTATGCATTCACTTATGTCTTACTTGATATTATCATTTCTCCTTCTTCTGCTTTCTTTTTCTCATTTTTTAGAGGTACTTTCTTCTCTCTCTTTTTTCACTCACATCAAATATTGCAATTTTTTTTAATACTGGAGATTAAATCTTTGATCTTAAAAAAATATTATATCAAAACTGCTATTAAGCTAAACTTATTTTGACATCAAATATTGTAATTTAGTTTATAAACTTGCAAGTATGGTGTTATAAATTGTTATATACATTAATGTAAAATGTAAAATGTAAAAAGTAAAATAAAATATGTTTAATGTGTTGATATTTGTATAGATACTGGGCCGAGCTTTGGGGGGAAAGACAGGGAGGGGTAGATCTGGATGGGACATTGGGATCACCACCGTACACGTTTCATCATCTTACAAACTCTTCTCATCGCTCAAAATACCCACCACCCTCTCCGTCATCGAATGCCATCGTGACGAGGTTTGCGTCCTTACAAACAATTCCTTCACATTAAGAATTCTAATTTTCGAATAACTAAATTTAACATCTATACATATCAATATTAGAACAATACTTTTTAACTCAAAATAACCTACAAATAGCTATTTTTTTTCGCTTTTTACGGCTTTCATCCTTAAACTTTACTGCTCTCTCTAATTAATTTTCTCAACTTCAGAAAATGTTTGTTTAATTGCATTTATAATCTCTACTCTATAAATAGTTCTTAATCTACAACTTCATCTCTAATAGCTCAATTTATCAATTTGAAATTTTTTAAAATACTCAACTTACCATTTTTAAAGAAAGTGTCTGTCCAATCATACTTCTCTATAAAGTTTAGGTATAAAGAAGAAAAATATTGCTCTAATTGCTGATAAGCAGCCAGATTTGTACGTTGACATGTTCTAATTTCGTGGGTACATGAAAAATGATATAGATCTACGAACTTCCTTCAAAGGCTGAAGTGATTGGAAGGTCAGATAAATATGGCATAGAGATGTTCAAATATGGGGATCATATCCTAGGCATTCAAGGTCACCCTGAGTACACCAAGGACATTCTCCTACACCTAATCGATCGCCTTGTTCTACGAAAACTCATCACGGTAAGATCCATTATATTGTTGGTTAATTTCTAGCATGGTCTCGTACTAGTGTTCTTAAACTTTTTTTCTTCTTATACATGGAGTTGAACAAGTAGAAGTGGGGTATTTAATCTTTCGCCACAAGGTCGATTGACATACATCTTAATTATTTGATCTATACTTAGTCTTTTCTTAAATACATATATTAGGTAATTGCAATGAGCAACAATTTTGAGACTAAAAATGAAGTGTACAACAAAACATTTTTAAAGAGTCATAGTATAACAAAATATATATCTATTCATGAGACTTCTATTAGCGATAGATAAACTTTAAGAGTTAGATCTAAGTTTTGTTATACTTACAAATTCTTTTGTATTGTAATATATCGCTAAATTGATTGTTACATTTTTAAAACTATTATAGCATATGTATTATTTATTTTGATTATTGAACTTGTAATAATTTGTATAAATTGGAAAGTGTTCTATATTGGGTCTAGGATGAATTTGCTGAGGAGATGAGGAGCAATGTGGAAGAAGGTGAGGCAGATAGGGAAGCATGGAAGAGGCTTTGCATCAATTTTCTCAAGGGTGGGTTGTGATTTAGGGAAAAATGGGTCTTCTCTTCTTCAATGTAAATATGGACTTCAACGACAATTATTTAGACAATGATATCGTTTTTAGATCTGCGATTTTAAAAGACAATGTAGGTTTGGTTCTTAGGTTTGAGTATAAATGCCTTGGGACTAGATCTAGTGCACCTATGTATGCTAATTATACGAGCTATGCAAACTTAGATTGTAGAAACCAATTCCTCCCACCATGTTAAACACTTGTAAGAGATATTTGGTTCACCGGTCACATTTATCTAATTTAAGGTTAAGAAGCCTTAACCTTTACTTCATACA TCTTTCCCTCTCCGCTCTTTCTCTCTCTAAACTAAATCGGAGTTTAGAGAGAGAAACGTCCGGCGCCACATTGGATCGCCTGAAGAAGAAAACTAAGATCGATTGTATAGGAAGGAAGGATGGGGATGAAGAGATTTGCGTTGCTTCTTTGCGCAGAAGATTCGGAATACGTTAAAATGAAATACGGAGGATACTTCGGAGTGTTCGTCAGAATGTTGGGCGAAGAAGGCGAGGCTTGGGATCGTTTCCGTGTGGCTGCCGGTGAGTTTCCTGCAGATGATCAGATAGCCGACTACGACGGATTTGTGATTTCGGGTAGCTGCAACGACGCTCACGGCGACGATCCTTGGATCTGCCGATTGATCGCTTTGTTGCAGAGATTGGCGTCCTTGAACAAGCGAATTCTCGGCATTTGCTTCGGCCATCAGATACTGGGCCGAGCTTTGGGGGGAAAGACAGGGAGGGGTAGATCTGGATGGGACATTGGGATCACCACCGTACACGTTTCATCATCTTACAAACTCTTCTCATCGCTCAAAATACCCACCACCCTCTCCGTCATCGAATGCCATCGTGACGAGGCTGAAGTGATTGGAAGGTCAGATAAATATGGCATAGAGATGTTCAAATATGGGGATCATATCCTAGGCATTCAAGGTCACCCTGAGTACACCAAGGACATTCTCCTACACCTAATCGATCGCCTTGTTCTACGAAAACTCATCACGGATGAATTTGCTGAGGAGATGAGGAGCAATGTGGAAGAAGGTGAGGCAGATAGGGAAGCATGGAAGAGGCTTTGCATCAATTTTCTCAAGGGTGGGTTGTGATTTAGGGAAAAATGGGTCTTCTCTTCTTCAATGTAAATATGGACTTCAACGACAATTATTTAGACAATGATATCGTTTTTAGATCTGCGATTTTAAAAGACAATGTAGGTTTGGTTCTTAGGTTTGAGTATAAATGCCTTGGGACTAGATCTAGTGCACCTATGTATGCTAATTATACGAGCTATGCAAACTTAGATTGTAGAAACCAATTCCTCCCACCATGTTAAACACTTGTAAGAGATATTTGGTTCACCGGTCACATTTATCTAATTTAAGGTTAAGAAGCCTTAACCTTTACTTCATACA ATGGGGATGAAGAGATTTGCGTTGCTTCTTTGCGCAGAAGATTCGGAATACGTTAAAATGAAATACGGAGGATACTTCGGAGTGTTCGTCAGAATGTTGGGCGAAGAAGGCGAGGCTTGGGATCGTTTCCGTGTGGCTGCCGGTGAGTTTCCTGCAGATGATCAGATAGCCGACTACGACGGATTTGTGATTTCGGGTAGCTGCAACGACGCTCACGGCGACGATCCTTGGATCTGCCGATTGATCGCTTTGTTGCAGAGATTGGCGTCCTTGAACAAGCGAATTCTCGGCATTTGCTTCGGCCATCAGATACTGGGCCGAGCTTTGGGGGGAAAGACAGGGAGGGGTAGATCTGGATGGGACATTGGGATCACCACCGTACACGTTTCATCATCTTACAAACTCTTCTCATCGCTCAAAATACCCACCACCCTCTCCGTCATCGAATGCCATCGTGACGAGGCTGAAGTGATTGGAAGGTCAGATAAATATGGCATAGAGATGTTCAAATATGGGGATCATATCCTAGGCATTCAAGGTCACCCTGAGTACACCAAGGACATTCTCCTACACCTAATCGATCGCCTTGTTCTACGAAAACTCATCACGGATGAATTTGCTGAGGAGATGAGGAGCAATGTGGAAGAAGGTGAGGCAGATAGGGAAGCATGGAAGAGGCTTTGCATCAATTTTCTCAAGGGTGGGTTGTGA MGMKRFALLLCAEDSEYVKMKYGGYFGVFVRMLGEEGEAWDRFRVAAGEFPADDQIADYDGFVISGSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQILGRALGGKTGRGRSGWDIGITTVHVSSSYKLFSSLKIPTTLSVIECHRDEAEVIGRSDKYGIEMFKYGDHILGIQGHPEYTKDILLHLIDRLVLRKLITDEFAEEMRSNVEEGEADREAWKRLCINFLKGGL*
BLAST of Cucsa.331880.2 vs. Swiss-Prot
Match: GGP5_ARATH (Gamma-glutamyl peptidase 5 OS=Arabidopsis thaliana GN=GGP5 PE=2 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 8.1e-67 Identity = 125/241 (51.87%), Postives = 164/241 (68.05%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. Swiss-Prot
Match: GGP3_ARATH (Gamma-glutamyl peptidase 3 OS=Arabidopsis thaliana GN=GGP3 PE=2 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 1.0e-61 Identity = 114/242 (47.11%), Postives = 159/242 (65.70%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. Swiss-Prot
Match: GGP2_ARATH (Gamma-glutamyl peptidase 2 OS=Arabidopsis thaliana GN=GGP2 PE=2 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 3.8e-56 Identity = 113/240 (47.08%), Postives = 151/240 (62.92%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. Swiss-Prot
Match: GGP1_ARATH (Gamma-glutamyl peptidase 1 OS=Arabidopsis thaliana GN=GGP1 PE=1 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 4.9e-56 Identity = 106/241 (43.98%), Postives = 154/241 (63.90%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. Swiss-Prot
Match: GGP4_ARATH (Gamma-glutamyl peptidase 4 OS=Arabidopsis thaliana GN=GGP4 PE=3 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 4.9e-56 Identity = 106/240 (44.17%), Postives = 153/240 (63.75%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. TrEMBL
Match: A0A0A0KW88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G181720 PE=4 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 3.9e-132 Identity = 236/243 (97.12%), Postives = 236/243 (97.12%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. TrEMBL
Match: A0A061E207_THECC (Class I glutamine amidotransferase-like superfamily protein OS=Theobroma cacao GN=TCM_007353 PE=4 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 9.9e-96 Identity = 169/242 (69.83%), Postives = 204/242 (84.30%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. TrEMBL
Match: A0A0D2V6M6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G145300 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 6.4e-95 Identity = 167/243 (68.72%), Postives = 204/243 (83.95%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. TrEMBL
Match: F6I1U6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g01350 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 6.4e-95 Identity = 170/242 (70.25%), Postives = 201/242 (83.06%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. TrEMBL
Match: A0A0B0MVT9_GOSAR (Glutamine amidotransferase OS=Gossypium arboreum GN=F383_27183 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 8.4e-95 Identity = 167/243 (68.72%), Postives = 204/243 (83.95%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. TAIR10
Match: AT2G23970.1 (AT2G23970.1 Class I glutamine amidotransferase-like superfamily protein) HSP 1 Score: 255.0 bits (650), Expect = 4.6e-68 Identity = 125/241 (51.87%), Postives = 164/241 (68.05%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. TAIR10
Match: AT4G30550.1 (AT4G30550.1 Class I glutamine amidotransferase-like superfamily protein) HSP 1 Score: 238.0 bits (606), Expect = 5.8e-63 Identity = 114/242 (47.11%), Postives = 159/242 (65.70%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. TAIR10
Match: AT4G30540.1 (AT4G30540.1 Class I glutamine amidotransferase-like superfamily protein) HSP 1 Score: 219.5 bits (558), Expect = 2.1e-57 Identity = 113/240 (47.08%), Postives = 151/240 (62.92%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. TAIR10
Match: AT2G23960.1 (AT2G23960.1 Class I glutamine amidotransferase-like superfamily protein) HSP 1 Score: 219.2 bits (557), Expect = 2.8e-57 Identity = 106/240 (44.17%), Postives = 153/240 (63.75%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. TAIR10
Match: AT4G30530.1 (AT4G30530.1 Class I glutamine amidotransferase-like superfamily protein) HSP 1 Score: 219.2 bits (557), Expect = 2.8e-57 Identity = 106/241 (43.98%), Postives = 154/241 (63.90%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. NCBI nr
Match: gi|449459550|ref|XP_004147509.1| (PREDICTED: putative glutamine amidotransferase YLR126C isoform X1 [Cucumis sativus]) HSP 1 Score: 478.8 bits (1231), Expect = 5.5e-132 Identity = 236/243 (97.12%), Postives = 236/243 (97.12%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. NCBI nr
Match: gi|659108928|ref|XP_008454458.1| (PREDICTED: putative glutamine amidotransferase YLR126C isoform X1 [Cucumis melo]) HSP 1 Score: 467.6 bits (1202), Expect = 1.3e-128 Identity = 230/243 (94.65%), Postives = 235/243 (96.71%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. NCBI nr
Match: gi|778692360|ref|XP_011653448.1| (PREDICTED: putative glutamine amidotransferase YLR126C isoform X2 [Cucumis sativus]) HSP 1 Score: 411.4 bits (1056), Expect = 1.1e-111 Identity = 203/210 (96.67%), Postives = 203/210 (96.67%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. NCBI nr
Match: gi|568868914|ref|XP_006487691.1| (PREDICTED: putative glutamine amidotransferase YLR126C [Citrus sinensis]) HSP 1 Score: 360.1 bits (923), Expect = 2.9e-96 Identity = 175/245 (71.43%), Postives = 198/245 (80.82%), Query Frame = 1
BLAST of Cucsa.331880.2 vs. NCBI nr
Match: gi|590687952|ref|XP_007042811.1| (Class I glutamine amidotransferase-like superfamily protein [Theobroma cacao]) HSP 1 Score: 357.8 bits (917), Expect = 1.4e-95 Identity = 169/242 (69.83%), Postives = 204/242 (84.30%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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