Cucsa.159830.2 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.159830.2
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	tRNA (Adenine-N(1)-)-methyltransferase non-catalytic subunit trm6
Location	scaffold01144 : 202949 .. 208095 (-)
Sequence length	1688

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCCAGGATTCAAAGGCTTGAACACGTCCGACTGAAGTTCGACTTTTCGATTCGGTCGAGCCCACTCACAGCACCCAGCGGTTAAAGCCCCCTCGTTCCCAGGTGTGCATTTCCTTGTCCCTGCTTCAACCGTTACTCTCTCTCTCCTTAAACCCTAAAACTCACTGAAAACCCATAGCAATTTCCCACTCTTTTGATCCTCTATACTTTTATGCTTTCTTAACTTATTCATCTTCTTAGTGTAGTTTCAAGATGTCCTTGACTATTCTTCAATCTGAATCGCGTCGAAACCCTAGATTGACATGGGAAGGTTGCAGTGTTTTGCTTGACGTCAATGATGGTGACCGCTTGGTTTTTGCTCGACTTTCTCCCGCCTCGTATGTCTCAAGTTTGAGTGTTGATTTCTGGTTGTCAATGCTGAGTAACTGTGATGCATAATAATGAAAATTACTTTGATTTGCAGTACGCTGAAAATTGGGAACAAAAGTTTCTCTCTTAAGCCTTTAATTGGTTGCCCATTCGGTTCCTTGTTTCAAATTGAAAATGGAGGGAATGGTCCAGAGCTGGCTCGCGTTATGCCTTCCAGAGAAGAAGAAGGTTTTGATTCATTACTGTGGATTTTGTTAATGAATTGGTTTCATCTTTGCGGAAAAAACGTTTAACTGAAGCGATGTGCTATTTGGGTATATTTTGTTTTTCAAGGCATTAGCTGTCAGGAAACGGAGGAGATGAAGGAAGAGCAGGTGACAAAAGATGAGCTGAGAGATAACAGAGCGATTGTAGACAATAATAAGGCACAAAGTCTCTCTAGTGAAGATATTGATGCAATGCGAAGGTAAGATATTGCTTTGCTTTGCTACTGGTTAAGTCGCATAATCTGTTTTATCCTGTCCCTCATATTCCCTTGAGAGGCACCCTTGGCTTTACCCTCTTAAAATGTTGATCCAAACACATTTTTATCACTGTGGATGAAGTCCAAAAGTCTTGAATATGACGAAATGCACTGGCAATTTCGGTCCTATTCCTATGCTGGGTATATGGGCATCATTATTATTTGAATTGGTTGGTTTCATAAAAAGAGCGACCAAACTTTGCAGCCCAATGAACCTGCTTGAACCCTGCATTTGTCACAGTGATTCTAGCTCTGTGGTATCTCAGTTGCAGGAAGCCAACCATGTGCGACCACTGTACTAGGATTTCAGTGGCACGGGGTCTGTTCCGCATATTCTCCTCATTGTTTTGAAATTGATGGGAATTGATCTTCTTTGATTTATTTTACAGAACTTTCCGTTGTCTTTTTCTTAAATATGTTATTATCCATGATGGATGCTGTCTCTTTATATGTAGTCAGGGTGCAACTGGTGATGAAATTGTGGAAGCTCTCATTGCCAACAGTGCAACATTTGATAAGAAAACAGTTTTCTCTCAGGTGATCAGAATGTGCATACCTGAGTAGCTTCATCTTTGTATGTAGCATTTTCTAAAGTTGTCCAAATTTTACATGCAGGAAAAATATAGGCTCAAGAAACAAAAGAAGTATGCTCCTAGGGTACTTTTGAGAAGACCTTTTACTCGAAGGTATACATAATAATAGTAATCCACTTAAAAAGTAAACGCACGGTAGATCACAGTCACTTTTTGTAGCATCACTTGAATCACTTGAATTCGTACATTAACAATGCTGATATTTCCCCCCGTCTTACAGTATATGTGAGGCATACTTCAAGAAATATCCAGCTAGAATTGGGTAATTTATTTGTCCACTTTTTCACTACATTTTTTCACTTTCAGTTTTAATTTTTTCCACATTTTAATTTTATGTTTGTGCGCTTGCATAATAATGATCTGCTTGTTTTCTATTTCCTTGCTTTTGATTCAGATTCTTGCGTTTGGATGCTTTATCTCTTCTTCTTTCATTTGGCAATGTGACTGCAAACTCTGATGTCCTTGTGGTTGATATGGTTGGTGGTCTTCTCACTGGAGCAGTGGCTGAGCGCCTAGGAGGTATTTCTCTATTATTCTTGGCATTTTAAAAAAAATATTCGAAGTGGGTTCATTTTTTTCAAAAAGTGGCTGCAAATCCTCTATGAATGTCAGTCATGGTACAAATCTAGGTTTATATGTGTGTAATGAAAAAACCTTGGGTATAAACCAACTACCAAGTGGGCTTAAAATCACTTGTCTCAAGCAAAGTTAGGTCTAATGGTTCAGCTAATCAGTCATGTTTATAGTTTCTTTGCTGTTAAGTGTATTTTCTAGTCACAAATAGTGTAGGAAACACTGTCGGTTGTCCATCCAATACGCTGGTTTTGAGGTAAGGCTTACAATATTTGGAATTCCTTCAAGGTCGCAAGTGTGTTATACCTTGTTGAAAACTTAACAGCTTAAAAACCATGTTTTATGGCGTTTGGGGTGAATGAAGTCTCTTTCACCATTAGTTTGAGTTGTCCATAGGCATAAATCAAATAAACAGGGGAAATCTATTGTTCGGTCTCAAGTTGCCATATGATAATTACAATGTTGTGTGCTTCTCTATATTATATAATGCTCAATTGTGTTTTTTTACAGGCAAAGGCTCTGTTTGCAATACATATGTTGGAAATACTCCAAACCCCATGGATATAGTAAGAATATTCAACTTTGATGATGAAATTTGCTCGAGGTTTGCTGCTTTAGTCCTCTTTCTTACATCTTCGTTACATTGCATATTTTATAAAATGTACTTTCTATTTTCTATTTTCTACACCATTCAATCACTCTTTGTTCACCAGGATAATGCGTTCATCTCTTGCCGACCTCACCTCATCCCAAATTGAACCTACCAAGCCTAATGGTGAAAACGAAGACAGTGTAAGTAGAGTTTTTCTTTTCTTAATGTTTTCTTAAGAGGAATTTGGAAGGAGCTGACTTCTGGAACGCTGAAGAGGGCTCTTGACTGAGTGCTTTTCAAAATTTGAAGTATTTGATACTGCAATCACAGCTACGGGACACAACGAATCACTTTCTTTATTGGGATACATCTTTTTATATTTAAAACATAAGTTTCTATCTATATTTATTTATTCAAGTCACCAAAACAAAGAATCTGTGCTTACTTAATTTAGTCCTTCCAAAAGTACTAGTTTAAATTTGTTACTCTTAGAATTCATTTTAAACTGTTTTGGTTGGATGATACCTTCTTTTTTTGTTCTTTATTATTTCTTTTTTTATAAAGATTAATGTACAGGAGCAGGCATCTCAACCTGTTAGTATGGACGAAAGCCCTCTACCATCTACAGACCAGTCCTCAGATCTCAACTCAGAGTCTATAGTTTCTCCATTGACAAAAGTATTTAAATGTGCAAAGGCTGGAGATAAGGCACCGCCAGAAGTTATTAATTTATGGAAGGAAAACGGTTTTACTAGGTGAGTAATGAGTATTGGTTAGTGGTAAAATTTACTTCACTATCAATAGTAATTCACTAAATTGTTTTTTATTAATTGCAGCCTAATAATTGCTGCACCACAGTCGGATGCATGGAGTCTTGTTAAAGATCTGTTACCTCTTGTAGCTAACTCTGCTCCATTTGCTATTTATCACCAGTATGTTCAGGTTGGTCTTCAAAAGAAGAAAAGAAATATTGTAAAAAAATGTTCGTTAAATTTACCTTACCTTCTCAAGGAGGGCTCTAAAGGCTTGGTGTATCTGAACGTCATAATTTAATACCCTTATGTCAGGCATGTTTAGCAGTAATTCTAATAAGGTTAAACTCACATTTTTCATTTTAAAAATCAATTATGAAACTTGCTTTTAATGATTCAAAACCAATTTTGATGAAATGAAAATTGCATTTAAAAGGTATAAATTTAAATATTAAATTTATTTTGACTGATTAAAGTCTTGTTTAGCATGATTTTGAGCTTGATAAAAGTGATTTTAAGAATATATTAGAGTAAAGATAGTCTCTCTGAGAATTAGCAGGGGACAAACCATGAGCATGATGATAGTAGGAGTGGAGCTCAATCCCCTCGTTATAAAATAAAGATATCAAGATATCGTTATTATTATTACCAAATGGAGATCCAAATAGAAATGAGATGTCATGTTTTGGGGGAGTGATTTTATATCCTTGTTTCCTTTTCAATAGGGGGAGTGATTTTATATCAATGTTATATATGTGTGTATCAGTTTGATTAAGTTACTTTTTTGTTGAATGCAGCCGCTTGCAACTTGCATGCATAAACTACAGCTTGAGAAGATGGCAATCAGCTTGCAAATTTCAGAACCTTGGCTTCGTGAATATCAGGTTTGATGGCTTTACATTTCCCCATACTTCCCTTTTAACAAAGTTTTGGAGAGAGGATTGAAGAACAATAGTCGTCCGCATTTAAACGTGGGATTTATACGTTCAAGATATTTACAAAGTCTTGACTTGCATGAAAATTACATAGGTCTGATTGCCCAATGAAAAGAAAATGTCTTGACTTGCATGGTTTGACTAACTGGTGGTAGTTGGTGAAAGTGTGGAAAGGTAAAAAGGGTTTGGGAATTGTTTCAAAAATCAAATTCTATGTGGGATCCATTTTGGATTTTAGAATCCTATGAAGTCTTTAAACAACCCTAAGTTATAGGATCGAGGTGACATGAATGAAAAATGAAAAATTAAGGTTCCGTTGGGTAACTAATTAAGCTTATTTATTTCCTCTAAGTTCCTATAAAATAGATGTGACAATTTTATTAACAGAACTTATGCTAAAGTTTATTTTATATGAAGGTTGAAGGTACAATATCTTTCATTTCTAATATCGTTGAATTGACCAATATTTGGCGCAATAATGCATGCAGGTTCTTCCTTCGAGAACTCATCCCTTTATGCAGATGAATGCATTTGGTGGATACATTCTTAGTGGGACTAAGATATGCGACCGTCAATAACAATTTCAATGTGTCGCCATTTTAGTGCAACTTTAAAATGCAGTGAAGGTGAAAACCAAATTTTGCCATGGGCTTGTATTTCAGCTTCTCTTAATTAGTTTTGTATCTTTCCATTTTTATTTAATCACTAGGATTACACAGCTCAGTAAACATCCTTTTTCTTTTAAATTATTTCACATAAAACCCATGTATCAATTTTATTATTATGATTATGAAAGGGGGATCGAGGCAC

mRNA sequence

GTCCAGGATTCAAAGGCTTGAACACGTCCGACTGAAGTTCGACTTTTCGATTCGGTCGAGCCCACTCACAGCACCCAGCGGTTAAAGCCCCCTCGTTCCCAGTTTCAAGATGTCCTTGACTATTCTTCAATCTGAATCGCGTCGAAACCCTAGATTGACATGGGAAGGTTGCAGTGTTTTGCTTGACGTCAATGATGGTGACCGCTTGGTTTTTGCTCGACTTTCTCCCGCCTCTACGCTGAAAATTGGGAACAAAAGTTTCTCTCTTAAGCCTTTAATTGGTTGCCCATTCGGTTCCTTGTTTCAAATTGAAAATGGAGGGAATGGTCCAGAGCTGGCTCGCGTTATGCCTTCCAGAGAAGAAGAAGGCATTAGCTGTCAGGAAACGGAGGAGATGAAGGAAGAGCAGGTGACAAAAGATGAGCTGAGAGATAACAGAGCGATTGTAGACAATAATAAGGCACAAAGTCTCTCTAGTGAAGATATTGATGCAATGCGAAGTCAGGGTGCAACTGGTGATGAAATTGTGGAAGCTCTCATTGCCAACAGTGCAACATTTGATAAGAAAACAGTTTTCTCTCAGGAAAAATATAGGCTCAAGAAACAAAAGAAGTATGCTCCTAGGGTACTTTTGAGAAGACCTTTTACTCGAAGTATATGTGAGGCATACTTCAAGAAATATCCAGCTAGAATTGGATTCTTGCGTTTGGATGCTTTATCTCTTCTTCTTTCATTTGGCAATGTGACTGCAAACTCTGATGTCCTTGTGGTTGATATGGTTGGTGGTCTTCTCACTGGAGCAGTGGCTGAGCGCCTAGGAGGCAAAGGCTCTGTTTGCAATACATATGTTGGAAATACTCCAAACCCCATGGATATAGTAAGAATATTCAACTTTGATGATGAAATTTGCTCGAGGATAATGCGTTCATCTCTTGCCGACCTCACCTCATCCCAAATTGAACCTACCAAGCCTAATGGTGAAAACGAAGACAGTGAGCAGGCATCTCAACCTGTTAGTATGGACGAAAGCCCTCTACCATCTACAGACCAGTCCTCAGATCTCAACTCAGAGTCTATAGTTTCTCCATTGACAAAAGTATTTAAATGTGCAAAGGCTGGAGATAAGGCACCGCCAGAAGTTATTAATTTATGGAAGGAAAACGGTTTTACTAGCCTAATAATTGCTGCACCACAGTCGGATGCATGGAGTCTTGTTAAAGATCTGTTACCTCTTGTAGCTAACTCTGCTCCATTTGCTATTTATCACCAGTATGTTCAGCCGCTTGCAACTTGCATGCATAAACTACAGCTTGAGAAGATGGCAATCAGCTTGCAAATTTCAGAACCTTGGCTTCGTGAATATCAGGTTCTTCCTTCGAGAACTCATCCCTTTATGCAGATGAATGCATTTGGTGGATACATTCTTAGTGGGACTAAGATATGCGACCGTCAATAACAATTTCAATGTGTCGCCATTTTAGTGCAACTTTAAAATGCAGTGAAGGTGAAAACCAAATTTTGCCATGGGCTTGTATTTCAGCTTCTCTTAATTAGTTTTGTATCTTTCCATTTTTATTTAATCACTAGGATTACACAGCTCAGTAAACATCCTTTTTCTTTTAAATTATTTCACATAAAACCCATGTATCAATTTTATTATTATGATTATGAAAGGGGGATCGAGGCAC

Coding sequence (CDS)

ATGTCCTTGACTATTCTTCAATCTGAATCGCGTCGAAACCCTAGATTGACATGGGAAGGTTGCAGTGTTTTGCTTGACGTCAATGATGGTGACCGCTTGGTTTTTGCTCGACTTTCTCCCGCCTCTACGCTGAAAATTGGGAACAAAAGTTTCTCTCTTAAGCCTTTAATTGGTTGCCCATTCGGTTCCTTGTTTCAAATTGAAAATGGAGGGAATGGTCCAGAGCTGGCTCGCGTTATGCCTTCCAGAGAAGAAGAAGGCATTAGCTGTCAGGAAACGGAGGAGATGAAGGAAGAGCAGGTGACAAAAGATGAGCTGAGAGATAACAGAGCGATTGTAGACAATAATAAGGCACAAAGTCTCTCTAGTGAAGATATTGATGCAATGCGAAGTCAGGGTGCAACTGGTGATGAAATTGTGGAAGCTCTCATTGCCAACAGTGCAACATTTGATAAGAAAACAGTTTTCTCTCAGGAAAAATATAGGCTCAAGAAACAAAAGAAGTATGCTCCTAGGGTACTTTTGAGAAGACCTTTTACTCGAAGTATATGTGAGGCATACTTCAAGAAATATCCAGCTAGAATTGGATTCTTGCGTTTGGATGCTTTATCTCTTCTTCTTTCATTTGGCAATGTGACTGCAAACTCTGATGTCCTTGTGGTTGATATGGTTGGTGGTCTTCTCACTGGAGCAGTGGCTGAGCGCCTAGGAGGCAAAGGCTCTGTTTGCAATACATATGTTGGAAATACTCCAAACCCCATGGATATAGTAAGAATATTCAACTTTGATGATGAAATTTGCTCGAGGATAATGCGTTCATCTCTTGCCGACCTCACCTCATCCCAAATTGAACCTACCAAGCCTAATGGTGAAAACGAAGACAGTGAGCAGGCATCTCAACCTGTTAGTATGGACGAAAGCCCTCTACCATCTACAGACCAGTCCTCAGATCTCAACTCAGAGTCTATAGTTTCTCCATTGACAAAAGTATTTAAATGTGCAAAGGCTGGAGATAAGGCACCGCCAGAAGTTATTAATTTATGGAAGGAAAACGGTTTTACTAGCCTAATAATTGCTGCACCACAGTCGGATGCATGGAGTCTTGTTAAAGATCTGTTACCTCTTGTAGCTAACTCTGCTCCATTTGCTATTTATCACCAGTATGTTCAGCCGCTTGCAACTTGCATGCATAAACTACAGCTTGAGAAGATGGCAATCAGCTTGCAAATTTCAGAACCTTGGCTTCGTGAATATCAGGTTCTTCCTTCGAGAACTCATCCCTTTATGCAGATGAATGCATTTGGTGGATACATTCTTAGTGGGACTAAGATATGCGACCGTCAATAA

Protein sequence

MSLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCPFGSLFQIENGGNGPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQSLSSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKGSVCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENEDSEQASQPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSLIIAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLREYQVLPSRTHPFMQMNAFGGYILSGTKICDRQ*

Homology

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BLAST of Cucsa.159830.2 vs. Swiss-Prot
Match: TRM6_DICDI (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 OS=Dictyostelium discoideum GN=trmt6 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 3.1e-59
Identity = 144/434 (33.18%), Postives = 237/434 (54.61%), Query Frame = 1


Query: 19  EGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCPFGSLFQIENGGNGPELAR 78
           EG  V+LD+N+G++    ++   S +KIG K   +  +IG  + S FQ+ N  N   L R
Sbjct: 37  EGDHVILDINNGEKFSVIKVKLGSKVKIGKKQILINSIIGESYYSSFQVSNEKN--TLER 96

Query: 79  VMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQSLSSEDIDAMRSQGATGDE 138
           +     ++ ++     E+ +         DNR +  NN AQ L+ EDI+ M+ +G   + 
Sbjct: 97  ITQKEIDDRLN--NLVELNQNDA------DNRNLDQNNTAQKLTQEDINEMKQKGTDSNT 156

Query: 139 IVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEAYFKKYPARIGFL 198
           I++ ++ NS +F  KT FSQ KY  KK KKY+  V + +P  +S+ EAY+KK   +I  L
Sbjct: 157 IIKTIVENSESFKTKTSFSQIKYLKKKIKKYSTIVKIIKPTLKSLTEAYYKKDSRKICGL 216

Query: 199 RLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKGSVCNTYVGNTPNPMDIVR 258
           R D+   LL+ GN+ ANS VLVV+   GL+TG++AER+ G+G++ + Y+G  P+ + IV 
Sbjct: 217 RFDSFGQLLTLGNIRANSQVLVVETCMGLVTGSIAERMNGQGTILSAYIGKGPS-LSIVN 276

Query: 259 IFNFDDEICSRIMRSSLADLTS--------SQIEPTKPNGENEDSEQASQPVSMDESPLP 318
            F F+ ++ + I   +L ++TS        S++ PT  +G   D +   +    ++    
Sbjct: 277 NFGFNTDVLNTIYPFNL-NITSVLNKGEDISKLPPTASSG-IYDKQVKEKEKEKEKDENV 336

Query: 319 STDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSLIIAAPQSDAWSLVK 378
             ++ S   +++I++         +  D +   ++ L K+ G  SL+I    S   +++ 
Sbjct: 337 KDEKESGEEAKTIIN---------QRNDTSNENIVKLLKDGGVWSLVIVTKYSPL-NILL 396

Query: 379 DLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLREYQVLPSRTHPFMQ 438
              P + +S  F IY Q+ QPL      L   +MA++ QISE W+RE+QVLP RTHP M 
Sbjct: 397 SCWPYLNSSGSFVIYSQFPQPLMEVHQFLHKNQMAVNQQISEIWMREHQVLPKRTHPMMG 447

Query: 439 MNAFGGYILSGTKI 445
           M+   G+IL GTK+
Sbjct: 457 MDGASGFILYGTKV 447

[Close]

BLAST of Cucsa.159830.2 vs. Swiss-Prot
Match: TRM6_BOVIN (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Bos taurus GN=TRMT6 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.1e-51
Identity = 142/454 (31.28%), Postives = 224/454 (49.34%), Query Frame = 1


Query: 27  VNDGDRLVFARLSPASTLKIGNKS--------FSLKPLIGCPFGSLFQIENGGNGPELAR 86
           + DGD +V  R      +++  +         F L  +IG  +G+ F++ NGG+      
Sbjct: 20  IRDGDFVVLKREDVFKAVQVQRRKKVTFEKQWFYLDNIIGHSYGTTFEVTNGGS------ 79

Query: 87  VMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQSLSSEDIDAMRSQGATGDE 146
           + P +++E    + T E KE         DNR I+D+ K+Q L+ +DI A++ +G  G+E
Sbjct: 80  LQPKKKKE----EPTSETKEAGT------DNRNIIDDGKSQKLTQDDIKALKDKGIKGEE 139

Query: 147 IVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEAYFKKYPARIGFL 206
           IV+ LI NS TF  KT F+Q+KY  KK+KKY   + + +P TR +   Y+ + P +I  +
Sbjct: 140 IVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEAMITVVKPSTRILSVMYYAREPGKINHM 199

Query: 207 RLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKGSVCNTYVGNTP------- 266
           R D L+ +L+ GN+ A + ++V++   GL+ GA+ ER+GG GS+   Y G  P       
Sbjct: 200 RYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGAMMERMGGFGSIIQLYPGGGPVRAATAC 259

Query: 267 ----------------NPMDIVRIFNFDDEICSRIMR--SSLADLTSSQIEPTKPNGENE 326
                           N +D +    F  E+ S   +  +S+ +   +  E      ENE
Sbjct: 260 FGFPKSFLSGLYEFPLNKVDSLLNGTFSAEMLSSEPKDIASVEESNGTLEEKQTSEQENE 319

Query: 327 DS----EQASQPVSMDESPLPSTDQS--SDLNSESIVSPLTKVFKCAKAGDKAPPEVINL 386
           DS     +++ P   +   + S D        S S    + +  +  +   K   E   L
Sbjct: 320 DSIAEAPESNHPEEQERMEIVSQDPDYKEPKESGSKKDYIQEKQRRQEEQKKRHLEAAAL 379

Query: 387 WKENGFTSLIIAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAIS 442
             E     LI+A+ +     L+  LL  VA S PF +Y QY +PL  C  KL+     I+
Sbjct: 380 LSERNADGLIVAS-RFHPTPLLLSLLDFVAPSRPFVVYCQYKEPLLECYTKLRERGGVIN 439

[Close]

BLAST of Cucsa.159830.2 vs. Swiss-Prot
Match: TRM6_MOUSE (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Mus musculus GN=Trmt6 PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.9e-50
Identity = 148/456 (32.46%), Postives = 222/456 (48.68%), Query Frame = 1


Query: 27  VNDGDRLVFARLSPASTLKIGNKS--------FSLKPLIGCPFGSLFQIENGGNGPELAR 86
           ++DGD +V  R      +++  +         F L   IG  +GS F + +GG       
Sbjct: 21  IHDGDFVVLKREDVFKAVQVQRRKKVTFEKQWFYLDNAIGHSYGSAFDVSSGG------- 80

Query: 87  VMPSREEEGISCQETEEMKEE-QVTKDELRDNRAIVDNNKAQSLSSEDIDAMRSQGATGD 146
                     S Q  ++++E    TK+   DNR IVD+ K+Q L+ +DI A++ +G  G+
Sbjct: 81  ----------SLQLRKKLEEPASETKEAGTDNRNIVDDGKSQKLTQDDIKALKDKGIKGE 140

Query: 147 EIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEAYFKKYPARIGF 206
           EIV+ LI NS TF  KT F+Q+KY  KK+KKY   V + +P TR +   Y+ + P +I  
Sbjct: 141 EIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEAIVTILKPSTRILSIMYYAREPGKINH 200

Query: 207 LRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKGSVCNTYVGNTPNPMDIV 266
           +R D L+ +L+ GN+ A + ++V++   GL+ GA+ ER+GG GS+   Y G+ P      
Sbjct: 201 MRYDTLAQMLTLGNIRAGNKMIVMETCSGLVLGAMMERMGGFGSIIQLYPGDGP-VRAAT 260

Query: 267 RIFNFDDEICSRIMRSSL------------ADLTSSQIEPTKP----NGENEDSEQASQP 326
             F F     S +    L            A++ SS+ + + P    NGE E+ E A Q 
Sbjct: 261 ACFGFPKSFLSGLYEFPLNKVNSLLNGTFSAEMLSSEPKDSTPVEESNGELEEKEIAEQ- 320

Query: 327 VSMDESPLPSTDQSSDLNSESIV--SPLTKVFKCAKA--------------GDKAPPEVI 386
              D     + + S +     IV   P  K  K  ++                K   E  
Sbjct: 321 ADEDNIVDAAENNSGEQRPMEIVPGDPENKEPKEKRSKRDYIQEKQRRQEEQRKRHLEAA 380

Query: 387 NLWKENGFTSLIIAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMA 442
            L  E     LI+A+ +     L+  LL  VA S PF +Y QY +PL  C  KL+     
Sbjct: 381 ALLGERNADGLIVAS-RFHPTPLLLSLLDFVAPSRPFVVYCQYKEPLLECYTKLRERGGV 440

[Close]

BLAST of Cucsa.159830.2 vs. Swiss-Prot
Match: TRM6_HUMAN (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Homo sapiens GN=TRMT6 PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.0e-49
Identity = 139/455 (30.55%), Postives = 221/455 (48.57%), Query Frame = 1


Query: 27  VNDGDRLVFARLSPASTLKIGNKS--------FSLKPLIGCPFGSLFQIENGGNGPELAR 86
           + DGD +V  R      +++  +         F L  +IG  +G+ F++ +GG+      
Sbjct: 20  IRDGDFVVLKREDVFKAVQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGS------ 79

Query: 87  VMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQSLSSEDIDAMRSQGATGDE 146
           + P ++ E    + T E KE         DNR IVD+ K+Q L+ +DI A++ +G  G+E
Sbjct: 80  LQPKKKRE----EPTAETKEAGT------DNRNIVDDGKSQKLTQDDIKALKDKGIKGEE 139

Query: 147 IVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEAYFKKYPARIGFL 206
           IV+ LI NS TF  KT F+Q+KY  KK+KKY   + + +P TR +   Y+ + P +I  +
Sbjct: 140 IVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEAIITVVKPSTRILSIMYYAREPGKINHM 199

Query: 207 RLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKGSVCNTYVGNTPNPMDIVR 266
           R D L+ +L+ GN+ A + ++V++   GL+ GA+ ER+GG GS+   Y G  P       
Sbjct: 200 RYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGAMMERMGGFGSIIQLYPGGGP-VRAATA 259

Query: 267 IFNFDDEICSRIMRSSL------------ADLTSSQIEPT----KPNGENEDSEQASQPV 326
            F F     S +    L            A + SS+ + +    + NG  E+ + + Q  
Sbjct: 260 CFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLSSEPKDSALVEESNGTLEEKQASEQEN 319

Query: 327 SMDESPLPSTDQSSDLNSESIVSP----------------LTKVFKCAKAGDKAPPEVIN 386
               +  P ++   D  +   +S                 + +  +  +   K   E   
Sbjct: 320 EDSMAEAPESNHPEDQETMETISQDPEHKGPKERGSKKDYIQEKQRRQEEQRKRHLEAAA 379

Query: 387 LWKENGFTSLIIAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAI 442
           L  E     LI+A+ +     L+  LL  VA S PF +Y QY +PL  C  KL+     I
Sbjct: 380 LLSERNADGLIVAS-RFHPTPLLLSLLDFVAPSRPFVVYCQYKEPLLECYTKLRERGGVI 439

[Close]

BLAST of Cucsa.159830.2 vs. Swiss-Prot
Match: TRM6_DEBHA (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=TRM6 PE=3 SV=2)

HSP 1 Score: 163.7 bits (413), Expect = 4.7e-39
Identity = 119/455 (26.15%), Postives = 214/455 (47.03%), Query Frame = 1


Query: 2   SLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGN-KSFSLKPLIGCP 61
           S TI+        RL  EG  ++             L P   + +G   +F++  ++G P
Sbjct: 26  STTIISPNQHALIRLPSEGLKII------------DLKPGGIISLGKFGTFAVDGILGYP 85

Query: 62  FGSLFQIENGGNGPELARVMPSREEEGISCQETEEMKEEQVTK--DELRDNRAIVDN--N 121
           FG  F+I        +  +    +E  +   E EE+ ++ +TK      DN   + N  +
Sbjct: 86  FGQTFEILEELKVKPIKSMTMQADETSVD-NENEELTKDDLTKMLSNSSDNNQNIINIGS 145

Query: 122 KAQSLSSEDIDAMRSQGATGD---EIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRV 181
           K Q L+SED+D ++  GAT D    I+E +IA    FDKKT+FSQ+KY  +KQ+K+  R 
Sbjct: 146 KIQKLTSEDVDKLKESGATSDIGQRIIEQMIAGHEGFDKKTLFSQQKYLKRKQQKFLRRF 205

Query: 182 LLRRPFTRSICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVA 241
            +    +  + + Y +K   R+  +  + L LLL++ NV      L++D  GG++  A+ 
Sbjct: 206 TVEYLGSSQLLQYYIEKDTQRVLDMSEETLGLLLNYANVRPGGKYLLIDETGGIILYAMM 265

Query: 242 ERLGGKGSVCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENE 301
           ER+ G+G++ + +    PN +  +R  ++ +E+ +R+++S       + ++  +P  E  
Sbjct: 266 ERMNGQGTIVSAHDNEHPNHI-ALRYSDYPEEMQNRMVKS------INWLQFLEPENEKV 325

Query: 302 DSEQASQPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGF 361
           + E A++                    E +       +   +   K    VI++  E  F
Sbjct: 326 EFETATEE-----------------EIEEMKHAKRAQYYRREQRAKNINSVIDMVMEGNF 385

Query: 362 TSLIIAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEP 421
               I+    +  +L+ +++P +  S P  IY Q+ + L    H +  +K  ++  I E 
Sbjct: 386 DG-FISVSTLNMPTLLPEIIPTIGGSRPVVIYSQFKEALLETQHHMSTDKRVLAPSIMET 442

Query: 422 WLREYQVLPSRTHPFMQMNAFGGYILSGTKICDRQ 449
            +R +Q +P R HP M M  FGGYIL GT++  R+
Sbjct: 446 RVRPHQTIPGRMHPVMCMRGFGGYILWGTRVFPRE 442

[Close]

BLAST of Cucsa.159830.2 vs. TrEMBL
Match: A0A0A0LRN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G367740 PE=4 SV=1)

HSP 1 Score: 883.2 bits (2281), Expect = 1.3e-253
Identity = 448/452 (99.12%), Postives = 448/452 (99.12%), Query Frame = 1


Query: 1   MSLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCP 60
           MSLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCP
Sbjct: 1   MSLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCP 60

Query: 61  FGSLFQIENGGNGPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQS 120
           FGSLFQIENGGNGPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQS
Sbjct: 61  FGSLFQIENGGNGPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQS 120

Query: 121 LSSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFT 180
           LSSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFT
Sbjct: 121 LSSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFT 180

Query: 181 RSICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKG 240
           RSICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKG
Sbjct: 181 RSICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKG 240

Query: 241 SVCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENEDS----E 300
           SVCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENEDS    E
Sbjct: 241 SVCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENEDSINVQE 300

Query: 301 QASQPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSL 360
           QASQPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSL
Sbjct: 301 QASQPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSL 360

Query: 361 IIAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLR 420
           IIAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLR
Sbjct: 361 IIAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLR 420

Query: 421 EYQVLPSRTHPFMQMNAFGGYILSGTKICDRQ 449
           EYQVLPSRTHPFMQMNAFGGYILSGTKICDRQ
Sbjct: 421 EYQVLPSRTHPFMQMNAFGGYILSGTKICDRQ 452

[Close]

BLAST of Cucsa.159830.2 vs. TrEMBL
Match: A0A061FE57_THECC (Eukaryotic initiation factor 3 gamma subunit family protein OS=Theobroma cacao GN=TCM_046884 PE=4 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 1.0e-170
Identity = 313/445 (70.34%), Postives = 360/445 (80.90%), Query Frame = 1


Query: 7   QSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCPFGSLFQ 66
           QS+S +NPR+TWEGCSVLLD+NDGDRLVFARLS  STLK GNK+ SL+PLIGCPFGSLFQ
Sbjct: 7   QSDSIQNPRVTWEGCSVLLDINDGDRLVFARLSAGSTLKFGNKTCSLQPLIGCPFGSLFQ 66

Query: 67  IENGGNGPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQSLSSEDI 126
           +E+G   P L+R +PS EE     +   ++KEE       RDNRAI+DNN+AQ L+ EDI
Sbjct: 67  VESGKEKPYLSRYIPSTEEGNAQDEGGCQLKEES------RDNRAIIDNNQAQCLTGEDI 126

Query: 127 DAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEA 186
           DAM+ QGATG+EIVEALIANSATF+KKT FSQEKYRLKKQKKYAP+VLLRRPF+RSICEA
Sbjct: 127 DAMKRQGATGNEIVEALIANSATFEKKTQFSQEKYRLKKQKKYAPKVLLRRPFSRSICEA 186

Query: 187 YFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKGSVCNTY 246
           YFKKYPARIGFLR+DALSLLLS  NVTANSDVLVVDMVGGLLTGAVAERLGG GS+CNTY
Sbjct: 187 YFKKYPARIGFLRVDALSLLLSMANVTANSDVLVVDMVGGLLTGAVAERLGGTGSLCNTY 246

Query: 247 VGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENED--------SEQA 306
            G TP PM+I+R+FNF+ EIC RI+R S  DL S+Q    +  G+ +D        +EQ 
Sbjct: 247 PGGTPYPMEIIRMFNFNSEICKRILRCSPKDLCSAQNGTDEQVGQQKDVSTVESQSNEQT 306

Query: 307 SQPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSLII 366
           S  VS +E  L S +  +DL  E+ +S ++K  K  KAGDKAP E I LWKENGF+SLII
Sbjct: 307 SLSVSTEEVHLSSENNVADLVPENELSTVSKTCKAPKAGDKAPKEAIQLWKENGFSSLII 366

Query: 367 AAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLREY 426
           AAP+ DAWSLVKDLLPL++ SAPFAIYHQY+QPLATCMH LQLEKMAI LQISEPWLREY
Sbjct: 367 AAPEQDAWSLVKDLLPLLSYSAPFAIYHQYLQPLATCMHNLQLEKMAIGLQISEPWLREY 426

Query: 427 QVLPSRTHPFMQMNAFGGYILSGTK 444
           QVLPSRTHP MQM+  GGYILSGT+
Sbjct: 427 QVLPSRTHPCMQMSGSGGYILSGTR 445

[Close]

BLAST of Cucsa.159830.2 vs. TrEMBL
Match: M5XBI1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005656mg PE=4 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 8.8e-170
Identity = 313/452 (69.25%), Postives = 358/452 (79.20%), Query Frame = 1


Query: 1   MSLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCP 60
           MS    QS+   +PR TWEGCSVLLD+NDGDRLVFARLS  +TLKIGNK+ SL+PL+GCP
Sbjct: 1   MSENKAQSDLFESPRSTWEGCSVLLDINDGDRLVFARLSSGATLKIGNKNCSLQPLLGCP 60

Query: 61  FGSLFQIENGGNGPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQS 120
           FGS F++ENG  GP L+R  PS E   +        K +  + DELRDNRA+VDNNKAQS
Sbjct: 61  FGSFFRVENGTQGPYLSRYTPSTEGNNVL------EKGDGQSIDELRDNRALVDNNKAQS 120

Query: 121 LSSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFT 180
           L+ EDI+ MR  GATGDEIVEALIANSATF+KKTVFSQEKYRLKKQKKYAP VLLRRPFT
Sbjct: 121 LTGEDINEMRRLGATGDEIVEALIANSATFEKKTVFSQEKYRLKKQKKYAPIVLLRRPFT 180

Query: 181 RSICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKG 240
           RSICEAY KKYP RIGFLR+D LSLLLS  NV+ANSDVLVVDMVGGLLTG+VAERLGG G
Sbjct: 181 RSICEAYLKKYPTRIGFLRMDTLSLLLSMANVSANSDVLVVDMVGGLLTGSVAERLGGTG 240

Query: 241 SVCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKP--------NGEN 300
            VCNTY+G +P PMDI RIFNF DEIC RI+RS L DL S Q    KP        N E+
Sbjct: 241 YVCNTYIGGSPYPMDIARIFNFGDEICKRIVRSPLTDLFSVQNGLQKPVSQDSDSCNMES 300

Query: 301 EDSEQASQPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENG 360
           + +++ S PVSM+E  L S +  SDL  ES  SP+ K+ K AK G+KAP E+I+ WKE+G
Sbjct: 301 QSNDRISSPVSMEEVSLASENVISDLIPESTSSPVIKMSKPAKLGEKAPQEIISSWKEHG 360

Query: 361 FTSLIIAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISE 420
           F+ LIIAAP+ D WSLVK++ PL+++SAPFAIYHQY+QPLATCMH LQL KMAI +QISE
Sbjct: 361 FSCLIIAAPELDTWSLVKEIFPLMSSSAPFAIYHQYLQPLATCMHNLQLGKMAIGMQISE 420

Query: 421 PWLREYQVLPSRTHPFMQMNAFGGYILSGTKI 445
           PWLREYQVLPSRTHP MQMNAFGGYILSGTKI
Sbjct: 421 PWLREYQVLPSRTHPCMQMNAFGGYILSGTKI 446

[Close]

BLAST of Cucsa.159830.2 vs. TrEMBL
Match: A0A067KYJ4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08225 PE=4 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 1.2e-169
Identity = 302/448 (67.41%), Postives = 366/448 (81.70%), Query Frame = 1


Query: 1   MSLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCP 60
           MS   L+S+S +NPR+TWEGCSVLLD+NDGDRLVF+RL+P S LKIGNK+ SL+PLIGCP
Sbjct: 1   MSQNNLESDSLQNPRVTWEGCSVLLDINDGDRLVFSRLTPGSNLKIGNKNLSLRPLIGCP 60

Query: 61  FGSLFQIENGGNGPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQS 120
           FGSLFQIENG  GP L+R +PS++          E K +    DE RDNRA++DNNKAQS
Sbjct: 61  FGSLFQIENGKEGPCLSRFIPSKQGNNA------EEKSDCEMIDESRDNRALIDNNKAQS 120

Query: 121 LSSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFT 180
           L+ +DIDAMR QGA G+EI++ALIANSATF+KKT+FSQEKYRLKKQKKYAPRVLLRRPFT
Sbjct: 121 LTGDDIDAMRRQGAKGEEIIDALIANSATFEKKTLFSQEKYRLKKQKKYAPRVLLRRPFT 180

Query: 181 RSICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKG 240
           RSICE YFKKYPARIG+LR+DALSLLLS  NVTANSD+LV+DMVGGLLTGAVAERLGG G
Sbjct: 181 RSICETYFKKYPARIGYLRIDALSLLLSMANVTANSDILVMDMVGGLLTGAVAERLGGTG 240

Query: 241 SVCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENEDSEQAS- 300
            VC+TY+G+TP+ +DIVR+FNF+++IC RI+R+SL+DL  +Q E +  +  +ED+   S 
Sbjct: 241 YVCSTYLGDTPHSVDIVRMFNFNNDICKRIVRASLSDLCLAQNETSNQSCAHEDAPMESN 300

Query: 301 ---QPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSL 360
                +SM E  L S  +++D++ +   SP +K+ K  KAG++A  E + LWKENGF+SL
Sbjct: 301 GQTSSISMAEMSLSSEPEAADIDPDPTASPASKISKVHKAGERATDEALKLWKENGFSSL 360

Query: 361 IIAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLR 420
           IIAAP  D WSLV ++LPL++ SAPFAIYHQY+QPLATCMH LQL KMAI LQISEPWLR
Sbjct: 361 IIAAPDLDPWSLVNEILPLLSYSAPFAIYHQYLQPLATCMHNLQLGKMAIGLQISEPWLR 420

Query: 421 EYQVLPSRTHPFMQMNAFGGYILSGTKI 445
           EYQVLPSRTHP MQM+AFGGYILSGT+I
Sbjct: 421 EYQVLPSRTHPCMQMSAFGGYILSGTRI 442

[Close]

BLAST of Cucsa.159830.2 vs. TrEMBL
Match: B9H4W0_POPTR (Eukaryotic initiation factor 3 gamma subunit family protein OS=Populus trichocarpa GN=POPTR_0005s25940g PE=4 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 1.7e-168
Identity = 305/445 (68.54%), Postives = 358/445 (80.45%), Query Frame = 1


Query: 1   MSLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCP 60
           MS   +QS+S +NPR+TWEGCSVLLD+NDGDRLVFARL+  STLKIG K +SL+PLIGCP
Sbjct: 1   MSQNNIQSDSVQNPRVTWEGCSVLLDINDGDRLVFARLTAGSTLKIGKKKYSLRPLIGCP 60

Query: 61  FGSLFQIENGGNGPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQS 120
           FGS FQIENG  GP L+R +PS EE    CQ            DE +DNRAIVDNN+AQ+
Sbjct: 61  FGSSFQIENGTEGPYLSRFIPSTEERE-GCQIV----------DECKDNRAIVDNNEAQT 120

Query: 121 LSSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFT 180
           L+SEDID MR QGA GDEI+EALIANSATF+KKT FSQEKYR+KKQKKYAPRVLLRRP  
Sbjct: 121 LTSEDIDEMRRQGAKGDEIIEALIANSATFEKKTAFSQEKYRIKKQKKYAPRVLLRRPSA 180

Query: 181 RSICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKG 240
           RSICEAYFKKYP RIGFLR+D LSLLLS  NV+ANSD+L+VDMVGGLLTGAVAERLGG G
Sbjct: 181 RSICEAYFKKYPNRIGFLRVDVLSLLLSLANVSANSDILLVDMVGGLLTGAVAERLGGTG 240

Query: 241 SVCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENEDSEQASQ 300
            VCNTY+G+TP+P++IVR FNF++EIC RI+R+ L DL S Q    K +  N +      
Sbjct: 241 CVCNTYLGSTPSPVEIVRTFNFNNEICKRIVRAPLHDLCSDQTGTKKIDSCNAELNVQIS 300

Query: 301 PVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSLIIAA 360
            +S++E PLPS  +++D  S++IVSP +K+ K  KAG+KA  E +  WKENGF+SLIIAA
Sbjct: 301 TISIEEMPLPSKHEAAD--SQTIVSPQSKMGKAPKAGEKASEEALKSWKENGFSSLIIAA 360

Query: 361 PQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLREYQV 420
           P +DAW+LVK LLPL++ SAPFAIYHQY+QPLATCMH LQ  KMAI +QISEPWLREYQV
Sbjct: 361 PDADAWNLVKVLLPLISYSAPFAIYHQYLQPLATCMHNLQQSKMAIGMQISEPWLREYQV 420

Query: 421 LPSRTHPFMQMNAFGGYILSGTKIC 446
           LPSRT P MQM++FGGYILSGTKIC
Sbjct: 421 LPSRTRPSMQMSSFGGYILSGTKIC 432

[Close]

BLAST of Cucsa.159830.2 vs. TAIR10
Match: AT2G45730.1 (AT2G45730.1 eukaryotic initiation factor 3 gamma subunit family protein)

HSP 1 Score: 533.1 bits (1372), Expect = 1.7e-151
Identity = 271/440 (61.59%), Postives = 338/440 (76.82%), Query Frame = 1


Query: 13  NPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCPFGSLFQIENGGN 72
           NPR   EGCSVLLD+NDGDRLVFARLS  + LKIGNK++SLKPLIG PFGSLFQ+E G +
Sbjct: 20  NPRFACEGCSVLLDINDGDRLVFARLSSGAILKIGNKNYSLKPLIGAPFGSLFQVETGED 79

Query: 73  GPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQSLSSEDIDAMRSQ 132
           G  L+R++P ++E                  D+ RDNR IVDNN+AQ+L+ E+I+AMR +
Sbjct: 80  GSFLSRILPIKQESN-----------SNNVMDDSRDNREIVDNNEAQNLTGEEIEAMRRE 139

Query: 133 GATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEAYFKKYP 192
           GA GDEI+EALIANS TFDKK   SQEKY+LKKQKKYAP++LLRRPF RSICEAYFKKYP
Sbjct: 140 GAKGDEIIEALIANSKTFDKKFQLSQEKYKLKKQKKYAPKLLLRRPFARSICEAYFKKYP 199

Query: 193 ARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKGSVCNTYVGNTPN 252
           ARIGFLR+DALSLLL+  NVTA SDVLVVDMVGGL+TGAVAERLGG G VCNTY G++P 
Sbjct: 200 ARIGFLRVDALSLLLTMANVTAYSDVLVVDMVGGLVTGAVAERLGGTGYVCNTYKGSSPY 259

Query: 253 PMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPN--------GENEDSEQASQPVSM 312
           P+++VR+FNF D++  RI++SS+ +L+S++   T+ N         EN  +E A+  V +
Sbjct: 260 PVEMVRMFNFSDKVLKRIVQSSINELSSAKTASTEGNNQQEGVCKAENNINETATSDVMV 319

Query: 313 DESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSLIIAAPQSD 372
           +E  +     +++     IV P +K+ K AKAG KA  E I +W+ENGF+SLI+AA   D
Sbjct: 320 EEISV-----TTEAGVVDIVVPESKIIKAAKAGAKASKETIEMWQENGFSSLIMAAQDQD 379

Query: 373 AWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLREYQVLPSR 432
            W + KD+LPL++ SAPFAIYHQY+QPLATCMHKLQ  KMAI+LQI+EPWLREYQVLPSR
Sbjct: 380 PWIVAKDVLPLLSYSAPFAIYHQYLQPLATCMHKLQQGKMAINLQITEPWLREYQVLPSR 439

Query: 433 THPFMQMNAFGGYILSGTKI 445
           +HP MQM++FGGY+LSG +I
Sbjct: 440 SHPHMQMSSFGGYVLSGIRI 443

[Close]

BLAST of Cucsa.159830.2 vs. NCBI nr
Match: gi|449469893|ref|XP_004152653.1| (PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 isoform X4 [Cucumis sativus])

HSP 1 Score: 889.0 bits (2296), Expect = 3.4e-255
Identity = 448/448 (100.00%), Postives = 448/448 (100.00%), Query Frame = 1


Query: 1   MSLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCP 60
           MSLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCP
Sbjct: 1   MSLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCP 60

Query: 61  FGSLFQIENGGNGPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQS 120
           FGSLFQIENGGNGPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQS
Sbjct: 61  FGSLFQIENGGNGPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQS 120

Query: 121 LSSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFT 180
           LSSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFT
Sbjct: 121 LSSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFT 180

Query: 181 RSICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKG 240
           RSICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKG
Sbjct: 181 RSICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKG 240

Query: 241 SVCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENEDSEQASQ 300
           SVCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENEDSEQASQ
Sbjct: 241 SVCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENEDSEQASQ 300

Query: 301 PVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSLIIAA 360
           PVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSLIIAA
Sbjct: 301 PVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSLIIAA 360

Query: 361 PQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLREYQV 420
           PQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLREYQV
Sbjct: 361 PQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLREYQV 420

Query: 421 LPSRTHPFMQMNAFGGYILSGTKICDRQ 449
           LPSRTHPFMQMNAFGGYILSGTKICDRQ
Sbjct: 421 LPSRTHPFMQMNAFGGYILSGTKICDRQ 448

[Close]

BLAST of Cucsa.159830.2 vs. NCBI nr
Match: gi|778671553|ref|XP_011649655.1| (PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 isoform X1 [Cucumis sativus])

HSP 1 Score: 883.2 bits (2281), Expect = 1.8e-253
Identity = 448/452 (99.12%), Postives = 448/452 (99.12%), Query Frame = 1


Query: 1   MSLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCP 60
           MSLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCP
Sbjct: 1   MSLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCP 60

Query: 61  FGSLFQIENGGNGPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQS 120
           FGSLFQIENGGNGPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQS
Sbjct: 61  FGSLFQIENGGNGPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQS 120

Query: 121 LSSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFT 180
           LSSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFT
Sbjct: 121 LSSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFT 180

Query: 181 RSICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKG 240
           RSICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKG
Sbjct: 181 RSICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKG 240

Query: 241 SVCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENEDS----E 300
           SVCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENEDS    E
Sbjct: 241 SVCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENEDSINVQE 300

Query: 301 QASQPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSL 360
           QASQPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSL
Sbjct: 301 QASQPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSL 360

Query: 361 IIAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLR 420
           IIAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLR
Sbjct: 361 IIAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLR 420

Query: 421 EYQVLPSRTHPFMQMNAFGGYILSGTKICDRQ 449
           EYQVLPSRTHPFMQMNAFGGYILSGTKICDRQ
Sbjct: 421 EYQVLPSRTHPFMQMNAFGGYILSGTKICDRQ 452

[Close]

BLAST of Cucsa.159830.2 vs. NCBI nr
Match: gi|778671560|ref|XP_011649657.1| (PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 isoform X2 [Cucumis sativus])

HSP 1 Score: 876.7 bits (2264), Expect = 1.7e-251
Identity = 447/452 (98.89%), Postives = 447/452 (98.89%), Query Frame = 1


Query: 1   MSLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCP 60
           MSLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCP
Sbjct: 1   MSLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCP 60

Query: 61  FGSLFQIENGGNGPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQS 120
           FGSLFQIENGGNGPELARVMPSRE EGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQS
Sbjct: 61  FGSLFQIENGGNGPELARVMPSRE-EGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQS 120

Query: 121 LSSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFT 180
           LSSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFT
Sbjct: 121 LSSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFT 180

Query: 181 RSICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKG 240
           RSICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKG
Sbjct: 181 RSICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKG 240

Query: 241 SVCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENEDS----E 300
           SVCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENEDS    E
Sbjct: 241 SVCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENEDSINVQE 300

Query: 301 QASQPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSL 360
           QASQPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSL
Sbjct: 301 QASQPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSL 360

Query: 361 IIAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLR 420
           IIAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLR
Sbjct: 361 IIAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLR 420

Query: 421 EYQVLPSRTHPFMQMNAFGGYILSGTKICDRQ 449
           EYQVLPSRTHPFMQMNAFGGYILSGTKICDRQ
Sbjct: 421 EYQVLPSRTHPFMQMNAFGGYILSGTKICDRQ 451

[Close]

BLAST of Cucsa.159830.2 vs. NCBI nr
Match: gi|659088095|ref|XP_008444799.1| (PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 isoform X3 [Cucumis melo])

HSP 1 Score: 857.1 bits (2213), Expect = 1.4e-245
Identity = 432/447 (96.64%), Postives = 441/447 (98.66%), Query Frame = 1


Query: 2   SLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCPF 61
           S TILQS+SRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCPF
Sbjct: 3   STTILQSDSRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCPF 62

Query: 62  GSLFQIENGGNGPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQSL 121
           GSLFQIENG NGP+LARVMPSREE GI+CQETEEMKEEQVTKDELRDNRA+VDNNKAQSL
Sbjct: 63  GSLFQIENGENGPQLARVMPSREE-GINCQETEEMKEEQVTKDELRDNRALVDNNKAQSL 122

Query: 122 SSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFTR 181
           SSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRL+KQKKYAPRVLLRRPFTR
Sbjct: 123 SSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLRKQKKYAPRVLLRRPFTR 182

Query: 182 SICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKGS 241
           SICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKGS
Sbjct: 183 SICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKGS 242

Query: 242 VCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENEDSEQASQP 301
           VCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGEN+ SEQASQP
Sbjct: 243 VCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENKVSEQASQP 302

Query: 302 VSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSLIIAAP 361
           VSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSLIIAAP
Sbjct: 303 VSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSLIIAAP 362

Query: 362 QSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLREYQVL 421
           QSDAW LVKDLLPLVA+SAPFAIYHQY+QPLATCMHKLQLEKMAI+LQISEPWLREYQVL
Sbjct: 363 QSDAWRLVKDLLPLVASSAPFAIYHQYLQPLATCMHKLQLEKMAINLQISEPWLREYQVL 422

Query: 422 PSRTHPFMQMNAFGGYILSGTKICDRQ 449
           PSRTHPFMQMNAFGGYILSGTKICD Q
Sbjct: 423 PSRTHPFMQMNAFGGYILSGTKICDHQ 448

[Close]

BLAST of Cucsa.159830.2 vs. NCBI nr
Match: gi|659088089|ref|XP_008444796.1| (PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 isoform X1 [Cucumis melo])

HSP 1 Score: 851.3 bits (2198), Expect = 7.8e-244
Identity = 432/451 (95.79%), Postives = 441/451 (97.78%), Query Frame = 1


Query: 2   SLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCPF 61
           S TILQS+SRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCPF
Sbjct: 3   STTILQSDSRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCPF 62

Query: 62  GSLFQIENGGNGPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQSL 121
           GSLFQIENG NGP+LARVMPSREE GI+CQETEEMKEEQVTKDELRDNRA+VDNNKAQSL
Sbjct: 63  GSLFQIENGENGPQLARVMPSREE-GINCQETEEMKEEQVTKDELRDNRALVDNNKAQSL 122

Query: 122 SSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFTR 181
           SSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRL+KQKKYAPRVLLRRPFTR
Sbjct: 123 SSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLRKQKKYAPRVLLRRPFTR 182

Query: 182 SICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKGS 241
           SICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKGS
Sbjct: 183 SICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKGS 242

Query: 242 VCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENEDS----EQ 301
           VCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGEN+ S    EQ
Sbjct: 243 VCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENKVSVNVQEQ 302

Query: 302 ASQPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSLI 361
           ASQPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSLI
Sbjct: 303 ASQPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSLI 362

Query: 362 IAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLRE 421
           IAAPQSDAW LVKDLLPLVA+SAPFAIYHQY+QPLATCMHKLQLEKMAI+LQISEPWLRE
Sbjct: 363 IAAPQSDAWRLVKDLLPLVASSAPFAIYHQYLQPLATCMHKLQLEKMAINLQISEPWLRE 422

Query: 422 YQVLPSRTHPFMQMNAFGGYILSGTKICDRQ 449
           YQVLPSRTHPFMQMNAFGGYILSGTKICD Q
Sbjct: 423 YQVLPSRTHPFMQMNAFGGYILSGTKICDHQ 452

The following BLAST results are available for this feature:

BLAST of Cucsa.159830.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TRM6_DICDI	3.1e-59	33.18	tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 OS=Dictyost...	[more]
TRM6_BOVIN	1.1e-51	31.28	tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Bos taur...	[more]
TRM6_MOUSE	5.9e-50	32.46	tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Mus musc...	[more]
TRM6_HUMAN	1.0e-49	30.55	tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Homo sap...	[more]
TRM6_DEBHA	4.7e-39	26.15	tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Debaryom...	[more]

BLAST of Cucsa.159830.2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRN2_CUCSA	1.3e-253	99.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G367740 PE=4 SV=1	[more]
A0A061FE57_THECC	1.0e-170	70.34	Eukaryotic initiation factor 3 gamma subunit family protein OS=Theobroma cacao G...	[more]
M5XBI1_PRUPE	8.8e-170	69.25	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005656mg PE=4 SV=1	[more]
A0A067KYJ4_JATCU	1.2e-169	67.41	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08225 PE=4 SV=1	[more]
B9H4W0_POPTR	1.7e-168	68.54	Eukaryotic initiation factor 3 gamma subunit family protein OS=Populus trichocar...	[more]

BLAST of Cucsa.159830.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45730.1	1.7e-151	61.59	eukaryotic initiation factor 3 gamma subunit family protein	[more]

BLAST of Cucsa.159830.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449469893\|ref\|XP_004152653.1\|	3.4e-255	100.00	PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 ...	[more]
gi\|778671553\|ref\|XP_011649655.1\|	1.8e-253	99.12	PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 ...	[more]
gi\|778671560\|ref\|XP_011649657.1\|	1.7e-251	98.89	PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 ...	[more]
gi\|659088095\|ref\|XP_008444799.1\|	1.4e-245	96.64	PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 ...	[more]
gi\|659088089\|ref\|XP_008444796.1\|	7.8e-244	95.79	PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR017423	TRM6

Vocabulary: **Biological Process**
Term	Definition
GO:0030488	tRNA methylation

Vocabulary: **Cellular Component**
Term	Definition
GO:0031515	tRNA (m1A) methyltransferase complex

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030488	tRNA methylation
biological_process	GO:0044271	cellular nitrogen compound biosynthetic process
biological_process	GO:1901566	organonitrogen compound biosynthetic process
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0044763	single-organism cellular process
cellular_component	GO:0031515	tRNA (m1A) methyltransferase complex
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003743	translation initiation factor activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.159830	Cucsa.159830	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.159830.2	Cucsa.159830.2-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.159830.2.CDS.13	Cucsa.159830.2.CDS.13	CDS
Cucsa.159830.2.CDS.12	Cucsa.159830.2.CDS.12	CDS
Cucsa.159830.2.CDS.11	Cucsa.159830.2.CDS.11	CDS
Cucsa.159830.2.CDS.10	Cucsa.159830.2.CDS.10	CDS
Cucsa.159830.2.CDS.9	Cucsa.159830.2.CDS.9	CDS
Cucsa.159830.2.CDS.8	Cucsa.159830.2.CDS.8	CDS
Cucsa.159830.2.CDS.7	Cucsa.159830.2.CDS.7	CDS
Cucsa.159830.2.CDS.6	Cucsa.159830.2.CDS.6	CDS
Cucsa.159830.2.CDS.5	Cucsa.159830.2.CDS.5	CDS
Cucsa.159830.2.CDS.4	Cucsa.159830.2.CDS.4	CDS
Cucsa.159830.2.CDS.3	Cucsa.159830.2.CDS.3	CDS
Cucsa.159830.2.CDS.2	Cucsa.159830.2.CDS.2	CDS
Cucsa.159830.2.CDS.1	Cucsa.159830.2.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.159830.2.three_prime_UTR.1	Cucsa.159830.2.three_prime_UTR.1	three_prime_UTR

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.159830.2.five_prime_UTR.2	Cucsa.159830.2.five_prime_UTR.2	five_prime_UTR
Cucsa.159830.2.five_prime_UTR.1	Cucsa.159830.2.five_prime_UTR.1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017423	tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6	PIR	PIRSF038170	TRM6	coord: 8..448 score: 2.0E
IPR017423	tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6	PANTHER	PTHR12945	TRANSLATION INITIATION FACTOR EIF3-RELATED	coord: 1..444 score: 1.3E
IPR017423	tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6	PFAM	PF04189	Gcd10p	coord: 22..293 score: 1.3
None	No IPR available	PANTHER	PTHR12945:SF0	TRNA (ADENINE(58)-N(1))-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT TRM6	coord: 1..444 score: 1.3E