Cucsa.152720.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTCTTCAATAGTTTGATGGTGGCCATTTTAATACATTATCATTTTTCTTTATTTTCTCAACACACGTGTTAGACAGTCAATTCGACTACACTTTTTTTAAAAAAaTTATTGAGGTATTTTTTTTtATTCCTCCCAATTCCTTTTTATCTTTTTGAGATTTAGGGTGAGAATAGCTATTGTAATTTTGTATAACTTATTTTATTCATGTGTTGTACTTATTAGTATATTTTATGTTGCAATGGATGTTATACAAATAAAATGAGTATATACACATTTCCTTTAAAAAAATTTATTTTTGTGAAATAAGATGAAGATAGGTGCATGTTAGTTAGTGGTTGAAAaCGATAATTTCCCCTTTGAAAATGTTTTTGACCTCTTACTTTCTCTACGCCGAAAATCCCGAACGTGGAGTCCGTCGCCACAACAACAGATTTGGGCACCAAATTAGGAAAGGAAAATGGAGCGAAGGGATGAAAAAGGGGAAGAGCGAAGTCAAATGGAAGCCGAAAAGCAGAAACTCCTTCCAGAACGGAGAGCCTAATCAGTAAATCAGGAATATTAATCTGACTAAGCTATGGTATTTTGCAGCTTTATAGTCTTATCGGTCGCTCATTTATCAGCGGATGCTTCGCAATCCATTGCTCGCTTTCCAGATCCCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGCTTTCCCTCTTCAACAGCTCTCTCGCCTTGCCCTCTCTCTTTGGACCTTATTCTGTGTTCCTCCACCTGGTTCTTTCTACTATTACTACTATTCCTCTGACTCTGATCTCTCTTCCTACGACTATGCTTCCGATTGATTCTCTCTGGTAATTTCCCCTCCTTTCTGCTTCTGGGTTTTCATCTTTTCCTTTTCCGGAGGACCATGCCACTGCTTTGTATTAGAATGAATACACTTATCACTGCTCTTTCTCTCCTTCAATTCACTATTTCAACAACTACTTGCAACGAAATTCAATATATTTATAaTTGTTGATCCGAAAACTTTGACTAGTGCTATGAGATTCGACAATTTCTGAAAATAACCATGCGTCCCTGACCACGGGTGATATTTGTGTCAGAGTTCTTTTACTATGATAGTAACTCAAAGCAACCGTGTAGTTAAGACAACGCCATTTGTTACTTGAATTGAAAGATCTCTTACTAGCTCATAATTTAAACAGACACCGTTTTCTTTAACTTTGATGGTTGAGGTTTCTGCTCCATGTTGTATCTCCTACATTTCAAATTGTCGCGTTCTTTGTGGGTTTCCAGCTACCACTTAATTTTATTAGATTTTTTTTTtCTTTTTTTtATCGTGGGCAATGGATACCTCTTGTCTTGCGATTTATCATAAGTGTCGCAGATATGCTTAATTTTTGAGGTGGAGATATGCTCCTTTTACTCTCTAGCTAACGGGTTGCACTTTTATCCTCTTCAAAGAATTGCATAGTTGTAACGTGGATGATTTTATCGATAGATATCTTTGTCATCTTTGTAGGCTAAGTTGTTGGAGGAGTGTAGAATTTAGTCATAAGGAAAGCCTTCTTTTTTAGTTTTCCCATATTCTTGTCCCCATCACTGTAGAACGTGATCAATTGGCATTTCACCTAAAAGCTTAAGTTGGTAGATCATATCCAAAATATGGATAATTGATATGAAGAGAGGAAGGGAATAACTCTTGAGGGATTTGAACTTAGGGTCTCATCGGTCAATGCCATTTCAATCAAATGCTTAGTTCTTATGGATTGTGTAAAACTGTAATTGACTTAGCTTGACTACCTCTAGGTTCATTCATACTCTTAGATAAATGGTTTTCATAAGTGATCTGGTGTTATTTATAACAGGATGTCTTCTGTTCTTAGAAGATCTTTTTTTTtATGAATCTGTTCTTTGATGATCTAAAACTCTTAAGTTTTGCTAGGTCTACTAATTAAGCCACATTTGCATACTCAGCTTCTTTGGCATTCCTTTTATTTGTTGTTGTCTGTGCTTTCCTTTGTTTTATTATCTCTCACACATTTCTTTTTTCTGTCTCCAATTCTTCTGCTTATACTTTTGTCTACCTGTTTCTCTCTTTCCATGTCCAAGTTGGATTAAGCACAATTTTATTATGTATTTGATCTTTCAAGATCTTAACATCAAGAAGCATATCCATCAGATATAGGACATCAGATATAGGACTGCTGTTTCCTATCCCAACACTTGAGACCTCTTATCCGCAGGTTAAATATGTGGACCTAATGAGAAGACAAATCACAAATAGTGTTATAATACAATATGAATCAACATTTTGCAGTCTGTGAGTTACAAAAAGATTTGTTCTCGGAATGTGAGTTTCAGGGTACTTCGGGCCTAATGGAGCTTGGGGAATACATCGGCTTTGCAAAATGGGGATTTGGGTTCAAATATAATGCAAGCAGGAATGGACCACATGAGCTTTGAAGACTGTTGAAGCAAAATTCTAAATTTGTTTAAAATTCTCTCCGACTCTTCACCATCTAAATACAACACTTGGGTGTTATAGAAATGGATATTACAAGGACGTGTCATCTTTGCTTGATGATTTCAACAGTTGAGTTTAATGGATTTCCTTGTTGCTAACCAAACTGATTCAGTAATGCGGTTGGTATTATGCATCATGAGAGTACCAACCAACTAGAAAAGCTTGTTCTTACCTACAATCGGTAGGCAGATGTCCCCTAATTGAGATTCAGTGAGTGCTTATTCTGTTCATGTTTATCCTTTCATAGAAAAATACTGCTAGGGTTGTGATTAAGCTTCTCATTAGTTATAACTTAGAAGTGAAAAAGTTTAGTATTTCTGTTAGTAAAACCAACATTTTTCATATTATGTGGTCTTTTAGGTAAATTTTAGAAACAAATTCACGTAAGCTTGAGTCAAAAGTGGCTAATAAATAAGAAATTTGGGATATTGTCTAAGGTTTGTGTGGCAGCTTCGAGCCATCATTCTTTTTGCTGTTTAAATGCTTTTCTGATGCTAACTTGTGTCATTTTCTACCTCTTACTATTATCTACCAATCTTTAACATGATTTTGATCTCTTTGCTGGCATTTTGTTCAAATTTTAAAACATTAAGTTTAGGGTAACATTTGATGCAATTTAATGGTGGCTTCACTCTTTGACATGAAGGATGGATACCCGGCGGTGCATCTAAACAGTTCTTAGCATGTTTTGTGTGAAAGGTATCCGAAGAGTCTTTGCCATTTCGGATGCAGTCCATGTGTTAGGGTGTCTCACTTCCAAGTTTCAGCAGTGTGAGTACATGAAGGCTTGGGGCTTCTCATCTCGTTGGTCTTCTATCCATGGTGAAAAAGTTTGTACATAGGTTTTTTTtCTGCAAAGGAAATGTAACAATGAAAAAGAGAGAAGCGTGCCAGAAATGTGTGTTTCACTTTCAATGAACTAAGCTTACATTGTTGTTCGATGTAGAACATTTGTTTCACTTTCTGGTTTCATTGGTTGAGGTTCGTCAGTAAGTCAGGGTTGACCTGAGATTGTGTGTACGGATCACTTGAAAAATGATGGCGGCACATATTTTACTTGGATTCTAAAGGAATGAATGCCTCGACTGTAAGTAGAAGTGTTTGATGCCAATTAGCCACGAGGGATGAGTTTGTTTGATTGGGCTTTGCAGGTTTGACTATGGACTGAGGAAGCTGTAATGACGTATATACGGGAAAA tGTCTTCAATAGTTTGATGGTGGCCATTTTAATACATTATCATTTTTCTTTATTTTCTCAACACACGTGTTAGACAGTCAATTCGACTACACTTTTTTTAAAAAAATTATTGAGGTATTTTTTTTTATTCCTCCCAATTCCTTTTTATCTTTTTGAGATTTAGGGTGAGAATAGCTATTGTAATTTTGTATAACTTATTTTATTCATGTGTTGTACTTATTAGTATATTTTATGTTGCAATGGATGTTATACAAATAAAATGAGTATATACACATTTCCTTTAAAAAAATTTATTTTTGTGAAATAAGATGAAGATAGGTGCATGTTAGTTAGTGGTTGAAAACGATAATTTCCCCTTTGAAAATGTTTTTGACCTCTTACTTTCTCTACGCCGAAAATCCCGAACGTGGAGTCCGTCGCCACAACAACAGATTTGGGCACCAAATTAGGAAAGGAAAATGGAGCGAAGGGATGAAAAAGGGGAAGAGCGAAGTCAAATGGAAGCCGAAAAGCAGAAACTCCTTCCAGAACGGAGAGCCTAATCAGTAAATCAGGAATATTAATCTGACTAAGCTATGGTATTTTGCAGCTTTATAGTCTTATCGGTCGCTCATTTATCAGCGGATGCTTCGCAATCCATTGCTCGCTTTCCAGATCCCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGCTTTCCCTCTTCAACAGCTCTCTCGCCTTGCCCTCTCTCTTTGGACCTTATTCTGTGTTCCTCCACCTGGTTCTTTCTACTATTACTACTATTCCTCTGACTCTGATCTCTCTTCCTACGACTATGCTTCCGATTGATTCTCTCTGGATGGATACCCGGCGGTGCATCTAAACAGTTCTTAGCATGTTTTGTGTGAAAGGTATCCGAAGAGTCTTTGCCATTTCGGATGCAGTCCATGTGTTAGGGTGTCTCACTTCCAAGTTTCAGCAGTGTGAGTACATGAAGGCTTGGGGCTTCTCATCTCGTTGGTCTTCTATCCATGGTGAAAAAGTTTGTACATAGGTTTTTTTTCTGCAAAGGAAATGTAACAATGAAAAAGAGAGAAGCGTGCCAGAAATGTGTGTTTCACTTTCAATGAACTAAGCTTACATTGTTGTTCGATGTAGAACATTTGTTTCACTTTCTGGTTTCATTGGTTGAGGTTCGTCAGTAAGTCAGGGTTGACCTGAGATTGTGTGTACGGATCACTTGAAAAATGATGGCGGCACATATTTTACTTGGATTCTAAAGGAATGAATGCCTCGACTGTAAGTAGAAGTGTTTGATGCCAATTAGCCACGAGGGATGAGTTTGTTTGATTGGGCTTTGCAGGTTTGACTATGGACTGAGGAAGCTGTAATGACGTATATACGGGAAAA ATGGTATTTTGCAGCTTTATAGTCTTATCGGTCGCTCATTTATCAGCGGATGCTTCGCAATCCATTGCTCGCTTTCCAGATCCCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGCTTTCCCTCTTCAACAGCTCTCTCGCCTTGCCCTCTCTCTTTGGACCTTATTCTGTGTTCCTCCACCTGGTTCTTTCTACTATTACTACTATTCCTCTGACTCTGATCTCTCTTCCTACGACTATGCTTCCGATTGA MVFCSFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSSYDYASD*
BLAST of Cucsa.152720.1 vs. TrEMBL
Match: A0A0A0L0B8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G268060 PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 1.3e-37 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1
BLAST of Cucsa.152720.1 vs. TrEMBL
Match: M5W0H4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012539mg PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 7.3e-17 Identity = 49/78 (62.82%), Postives = 57/78 (73.08%), Query Frame = 1
BLAST of Cucsa.152720.1 vs. TrEMBL
Match: B9SBP8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0343440 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 4.8e-16 Identity = 51/87 (58.62%), Postives = 57/87 (65.52%), Query Frame = 1
BLAST of Cucsa.152720.1 vs. TrEMBL
Match: W9SZJ5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019129 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 6.2e-16 Identity = 46/78 (58.97%), Postives = 55/78 (70.51%), Query Frame = 1
BLAST of Cucsa.152720.1 vs. TrEMBL
Match: B9GLC9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s04070g PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 8.1e-16 Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 1
BLAST of Cucsa.152720.1 vs. TAIR10
Match: AT1G55365.1 (AT1G55365.1 unknown protein) HSP 1 Score: 62.8 bits (151), Expect = 1.2e-10 Identity = 36/86 (41.86%), Postives = 47/86 (54.65%), Query Frame = 1
BLAST of Cucsa.152720.1 vs. TAIR10
Match: AT5G56520.1 (AT5G56520.1 unknown protein) HSP 1 Score: 61.2 bits (147), Expect = 3.5e-10 Identity = 33/77 (42.86%), Postives = 43/77 (55.84%), Query Frame = 1
BLAST of Cucsa.152720.1 vs. NCBI nr
Match: gi|700198864|gb|KGN54022.1| (hypothetical protein Csa_4G268060 [Cucumis sativus]) HSP 1 Score: 163.3 bits (412), Expect = 1.8e-37 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1
BLAST of Cucsa.152720.1 vs. NCBI nr
Match: gi|659097940|ref|XP_008449890.1| (PREDICTED: uncharacterized protein LOC103491633 [Cucumis melo]) HSP 1 Score: 161.8 bits (408), Expect = 5.4e-37 Identity = 79/84 (94.05%), Postives = 79/84 (94.05%), Query Frame = 1
BLAST of Cucsa.152720.1 vs. NCBI nr
Match: gi|1009124014|ref|XP_015878844.1| (PREDICTED: uncharacterized protein LOC107415082 [Ziziphus jujuba]) HSP 1 Score: 97.8 bits (242), Expect = 9.5e-18 Identity = 50/82 (60.98%), Postives = 59/82 (71.95%), Query Frame = 1
BLAST of Cucsa.152720.1 vs. NCBI nr
Match: gi|694315516|ref|XP_009375970.1| (PREDICTED: uncharacterized protein LOC103964725 [Pyrus x bretschneideri]) HSP 1 Score: 97.4 bits (241), Expect = 1.2e-17 Identity = 51/78 (65.38%), Postives = 58/78 (74.36%), Query Frame = 1
BLAST of Cucsa.152720.1 vs. NCBI nr
Match: gi|657951143|ref|XP_008351351.1| (PREDICTED: uncharacterized protein LOC103414759 [Malus domestica]) HSP 1 Score: 96.7 bits (239), Expect = 2.1e-17 Identity = 51/78 (65.38%), Postives = 58/78 (74.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
|