Cucsa.128390.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCCTCTTCATCTTCTTCCTCAAGGTTCAGAAATCCCTTAAAAATGGCGTAACAATCATTTCTCCATCTCTCCGCCGCTAAAATCACTTTTCACTATGAATTCCATTTTCTCCTCCATTCAATTCCGTCTTCTTCCATCACCAAATCCACGACAACCACAACATAATCTCCACATCTTCCACCAAATTTATCTTCCTCCACAAATAACCCACCGTTTCAGTTCAATAAAGACCAATTCAATTCTTCCAACTTCTCTAATTCTTGGAAACAGCACTATTCCTCCGTCGCAATCCGGCGACATTTCAGTCCTCCTCCCGATAAGGTTAGCCGAATTTCTCCTTACTCAGAATAAACTAATTAAAATTTCTTATTTGTGTTTTGGGTAATTTGTGCACAGCGGCGTGCTACTGATTGCGTATTTGCTAGCGAATTTCATTTTCCCGGAGTTTATTATGAAATCATACCGATCTGATGATGAGAACGACGGGAAGGGTGGAGGTGGAAGATGAAGAGAATGAAGCGGTAGAAGGAGATAATGAAACTTGAAGATTTAGCCATAAATTGAATTGAATTTAAGATTT TTTCCTCTTCATCTTCTTCCTCAAGGTTCAGAAATCCCTTAAAAATGGCGTAACAATCATTTCTCCATCTCTCCGCCGCTAAAATCACTTTTCACTATGAATTCCATTTTCTCCTCCATTCAATTCCGTCTTCTTCCATCACCAAATCCACGACAACCACAACATAATCTCCACATCTTCCACCAAATTTATCTTCCTCCACAAATAACCCACCGTTTCAGTTCAATAAAGACCAATTCAATTCTTCCAACTTCTCTAATTCTTGGAAACAGCACTATTCCTCCGTCGCAATCCGGCGACATTTCAGTCCTCCTCCCGATAAGCGGCGTGCTACTGATTGCGTATTTGCTAGCGAATTTCATTTTCCCGGAGTTTATTATGAAATCATACCGATCTGATGATGAGAACGACGGGAAGGGTGGAGGTGGAAGATGAAGAGAATGAAGCGGTAGAAGGAGATAATGAAACTTGAAGATTTAGCCATAAATTGAATTGAATTTAAGATTT ATGAATTCCATTTTCTCCTCCATTCAATTCCGTCTTCTTCCATCACCAAATCCACGACAACCACAACATAATCTCCACATCTTCCACCAAATTTATCTTCCTCCACAAATAACCCACCGTTTCAGTTCAATAAAGACCAATTCAATTCTTCCAACTTCTCTAATTCTTGGAAACAGCACTATTCCTCCGTCGCAATCCGGCGACATTTCAGTCCTCCTCCCGATAAGCGGCGTGCTACTGATTGCGTATTTGCTAGCGAATTTCATTTTCCCGGAGTTTATTATGAAATCATACCGATCTGATGATGAGAACGACGGGAAGGGTGGAGGTGGAAGATGA MNSIFSSIQFRLLPSPNPRQPQHNLHIFHQIYLPPQITHRFSSIKTNSILPTSLILGNSTIPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGKGGGGR*
BLAST of Cucsa.128390.1 vs. TrEMBL
Match: A0A0A0K9M2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G420170 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 5.7e-57 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1
BLAST of Cucsa.128390.1 vs. TrEMBL
Match: B9SV97_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1303160 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 7.5e-09 Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 1
BLAST of Cucsa.128390.1 vs. TrEMBL
Match: A0A151U2D8_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_006049 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-07 Identity = 37/98 (37.76%), Postives = 53/98 (54.08%), Query Frame = 1
BLAST of Cucsa.128390.1 vs. TrEMBL
Match: A0A067KSN4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00909 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-06 Identity = 44/111 (39.64%), Postives = 57/111 (51.35%), Query Frame = 1
BLAST of Cucsa.128390.1 vs. TrEMBL
Match: K7KBG7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G292400 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.5e-06 Identity = 37/103 (35.92%), Postives = 49/103 (47.57%), Query Frame = 1
BLAST of Cucsa.128390.1 vs. TAIR10
Match: AT1G50732.1 (AT1G50732.1 unknown protein.) HSP 1 Score: 48.9 bits (115), Expect = 2.4e-06 Identity = 19/47 (40.43%), Postives = 32/47 (68.09%), Query Frame = 1
BLAST of Cucsa.128390.1 vs. NCBI nr
Match: gi|700189839|gb|KGN45072.1| (hypothetical protein Csa_7G420170 [Cucumis sativus]) HSP 1 Score: 228.0 bits (580), Expect = 8.1e-57 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1
BLAST of Cucsa.128390.1 vs. NCBI nr
Match: gi|255578092|ref|XP_002529916.1| (PREDICTED: uncharacterized protein LOC8266243 [Ricinus communis]) HSP 1 Score: 68.2 bits (165), Expect = 1.1e-08 Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 1
BLAST of Cucsa.128390.1 vs. NCBI nr
Match: gi|1012362241|gb|KYP73424.1| (hypothetical protein KK1_006049 [Cajanus cajan]) HSP 1 Score: 64.3 bits (155), Expect = 1.6e-07 Identity = 37/98 (37.76%), Postives = 53/98 (54.08%), Query Frame = 1
BLAST of Cucsa.128390.1 vs. NCBI nr
Match: gi|802588385|ref|XP_012070858.1| (PREDICTED: uncharacterized protein LOC105632981 [Jatropha curcas]) HSP 1 Score: 60.8 bits (146), Expect = 1.7e-06 Identity = 44/111 (39.64%), Postives = 57/111 (51.35%), Query Frame = 1
BLAST of Cucsa.128390.1 vs. NCBI nr
Match: gi|356501544|ref|XP_003519584.1| (PREDICTED: uncharacterized protein LOC100798628 [Glycine max]) HSP 1 Score: 58.9 bits (141), Expect = 6.5e-06 Identity = 37/103 (35.92%), Postives = 49/103 (47.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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